Труды сотрудников ИЛ им. В.Н. Сукачева СО РАН

[Text] / N. Kirichenko [et al.] // ZooKeys. - 2015. - Is. 473. - P157-176, DOI 10.3897/zookeys.473.8543. - Cited References:44. - We acknowledge the team at the Biodiversity Institute of Ontario,University of Guelph, Ontario, Canada for their assistance in theproduction of DNA barcodes. Funding for DNA barcoding was partlyprovided by the government of Canada through Genome Canada and theOntario Genomics Institute in support of the International Barcode ofLife project, and by NSERC. Sequence analysis was enabled by a grantfrom the government of Canada through Genome Canada and the OntarioGenomics Institute in support of the International Barcode of LifeProject. Our work was also aided by the BOLD informatics platform whosedevelopment is funded by the Ontario Ministry of Economic Developmentand Innovation. Peter Huemer gratefully acknowledges funding frominatura Erlebnis Naturschau (Dornbirn, Austria) and the Promotion ofEducational Policies, University and Research Department of theAutonomous Province of Bolzano - South Tyrol for support of the project"Genetic biodiversity archive - DNA barcoding of Lepidoptera of thecentral Alpine region (South, East and North Tyrol)". Natalia Kirichenkowas supported by a fellowship of LE STUDIUM (R), France. . - ISSN 1313-2989. - ISSN 1313-2970РУБ Zoology

Аннотация: Europe has one of the best-known Lepidopteran faunas in the world, yet many species are still being discovered, especially in groups of small moths. Here we describe a new gracillariid species from the southeastern Alps, Callisto basistrigella Huemer, Deutsch & Triberti, sp. n. It shows differences from its sister species C. coffeella in morphology, the barcode region of the cytochrome c oxidase I gene and the nuclear gene histone H3. Both C. basistrigella and C. coffeella can co-occur in sympatry without evidence of admixture. Two C. basistrigella specimens show evidence of introgression. We highlight the importance of an integrative approach to delimit species, combining morphological and ecological data with mitochondrial and nuclear sequence data. Furthermore, in connection with this study, Ornix blandella Muller - Rutz, 1920, syn. n. is synonymized with C. coffeella (Zetterstedt, 1839).

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Держатели документа:
INRA, Zool Forestiere UR0633, F-45075 Orleans, France.
SB RAS, Sukachev Inst Forest, Krasnoyarsk 660036, Russia.
Siberian Fed Univ, Krasnoyarsk 660041, Russia.
Tiroler Landesmuseen Betriebsgesellsch MbH, Nat Wissensch Abt, A-6020 Innsbruck, Austria.
Museo Civ Storia Nat, I-I37129 Verona, Italy.
Museum Natl Hist Nat, ISYEB, UMR7205, F-75005 Paris, France.
ИЛ СО РАН

Доп.точки доступа:
Kirichenko, Natalia; Huemer, Peter; Deutsch, Helmut; Triberti, Paolo; Rougerie, Rodolphe; Lopez-Vaamonde, Carlos; government of Canada through Genome Canada; Ontario Genomics Institutein support of the International Barcode of Life project; NSERC; Ontario Ministry of Economic Development and Innovation; inatura Erlebnis Naturschau (Dornbirn, Austria); Promotion of Educational Policies,University and Research Department of the Autonomous Province of Bolzano- South Tyrolfellowship of LE STUDIUM(R), France

[Text] / N. Kirichenko [et al.] // ZooKeys. - 2016. - Is. 579. - P99-156, DOI 10.3897/zookeys.579.7166. - Cited References:68. - We are grateful to the team at the Biodiversity Institute of Ontario, University of Guelph, Ontario, Canada for their great assistance in the production of DNA barcodes. Funding for DNA barcoding and sequence analysis was partly provided by the Government of Canada through Genome Canada and the Ontario Genomics Institute in support of the International Barcode of Life project, and by NSERC. Genetic analyses were also partly funded by INRA, UR0633 Zoologie Forestiere's core funding. Our work was also aided by the BOLD informatics platform whose development is funded by the Ontario Ministry of Economic Development and Innovation. NK was supported by a fellowship of LE STUDIUM (R), France and the Russian foundation for basic research (grant No 15-29-02645). . - ISSN 1313-2989. - ISSN 1313-2970РУБ Zoology

Аннотация: During a DNA barcoding campaign of leaf-mining insects from Siberia, a genetically divergent lineage of a gracillariid belonging to the genus Micrurapteryx was discovered, whose larvae developed on Caragana Fabr. and Medicago L. (Fabaceae). Specimens from Siberia showed similar external morphology to the Palearctic Micrurapteryx gradatella and the Nearctic Parectopa occulta but differed in male genitalia, DNA barcodes, and nuclear genes histone H3 and 28S. Members of this lineage are re-described here as Micrurapteryx caraganella (Hering, 1957), comb. n., an available name published with only a brief description of its larva and leaf mine. Micrurapteryx caraganella is widely distributed throughout Siberia, from Tyumen oblast in the West to Transbaikalia in the East. Occasionally it may severely affect its main host, Caragana arborescens Lam. This species has been confused in the past with Micrurapreryx gradatella in Siberia, but field observations confirm that M. gradatella exists in Siberia and is sympatric with M. caraganella, at least in the Krasnoyarsk region, where it feeds on different host plants (Vicia amoena Fisch. and Vicia sp.). In addition, based on both morphological and molecular evidence as well as examination of type specimens, the North American Parectopa occulta Braun, 1922 and Parectopa albicostella Braun, 1925 are transferred to Micrurapteryx as M. occulta (Braun, 1922), comb. n. with albicostella as its junior synonym (syn. n.). Characters used to distinguish Micrurapteryx from Parectopa are presented and illustrated. These findings provide another example of the potential of DNA barcoding to reveal overlooked species and illuminate nomenclatural problems.

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Держатели документа:
Sukachev Inst Forest SB RAS, Akademgorodok 50-28, Krasnoyarsk 660036, Russia.
Siberian Fed Univ, 79 Svobodny Pr, Krasnoyarsk 660041, Russia.
INRA, Zool Forestiere UR0633, F-45075 Orleans, France.
Museo Civ Storia Nat, Lungadige Porta Vittoria 9, I-37129 Verona, Italy.
Univ Oulu, Dept Genet & Physiol, POB 3000, FI-90014 Oulu, Finland.
Agr & Agri Food Canada, Ottawa Res & Dev Ctr, Cent Expt Farm, Ottawa, ON K1A 0C6, Canada.
Univ Tours, Inst Rech Biol Insecte, CNRS UMR 7261, UFR Sci & Tech, F-37200 Tours, France.

Доп.точки доступа:
Kirichenko, Natalia; Triberti, Paolo; Mutanen, Marko; Magnoux, Emmanuelle; Landry, Jean-Francois; Lopez-Vaamonde, Carlos; Government of Canada through Genome Canada; Ontario Genomics Institute; NSERC; INRA [UR0633]; Ontario Ministry of Economic Development and Innovation; LE STUDIUM(R), France; Russian foundation for basic research [15-29-02645]

/ A. Kononov [et al.] // BMC Genet. - 2016. - Vol. 17, DOI 10.1186/s12863-016-0463-5 . - ISSN 1471-2156
Аннотация: Background: Moths of genus Dendrolimus (Lepidoptera: Lasiocampidae) are among the major pests of coniferous forests worldwide. Taxonomy and nomenclature of this genus are not entirely established, and there are many species with a controversial taxonomic position. We present a comparative evolutionary analysis of the most economically important Dendrolimus species in Eurasia. Results: Our analysis was based on the nucleotide sequences of COI and COII mitochondrial genes and ITS2 spacer of nuclear ribosomal genes. All known sequences were extracted from GenBank. Additional 112 new sequences were identified for 28 specimens of D. sibiricus, D. pini, and D. superans from five regions of Siberia and the Russian Far East to be able to compare the disparate data from all previous studies. In total, 528 sequences were used in phylogenetic analysis. Two clusters of closely related species in Dendrolimus were found. The first cluster includes D. pini, D. sibiricus, and D. superans; and the second, D. spectabilis, D. punctatus, and D. tabulaeformis. Species D. houi and D. kikuchii appear to be the most basal in the genus. Conclusion: Genetic difference among the second cluster species is very low in contrast to the first cluster species. Phylogenetic position D. tabulaeformis as a subspecies was supported. It was found that D. sibiricus recently separated from D. superans. Integration of D. sibiricus mitochondrial DNA sequences and the spread of this species to the west of Eurasia have been established as the cause of the unjustified allocation of a new species: D. kilmez. Our study further clarifies taxonomic problems in the genus and gives more complete information on the genetic structure of D. pini, D. sibiricus, and D. superans. © 2016 The Author(s).

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Institute of Cytology and Genetics, the Siberian Branch of the Russian Academy of Science, 10 Prospekt Lavrentyeva, Novosibirsk, Russian Federation
USDA-APHIS-PPQ CPHST, Otis Laboratory, Building 1398, Otis Air National Guard Base, Buzzards Bay, MA, United States
Marshall University, Department of Biological Sciences, 1601 5th Avenue, Huntington, WV, United States
V.N. Sukachev Institute of Forest, the Siberian Branch of the Russian Academy of Science, 50/28 Akademgorodok, Krasnoyarsk, Russian Federation

Доп.точки доступа:
Kononov, A.; Ustyantsev, K.; Wang, B.; Mastro, V. C.; Fet, V.; Blinov, A.; Baranchikov, Y.

/ N. Kirichenko [et al.] // PLoS ONE. - 2017. - Vol. 12, Is. 2, DOI 10.1371/journal.pone.0171104 . - ISSN 1932-6203
Аннотация: Knowing the phylogeographic structure of invasive species is important for understanding the underlying processes of invasion. The micromoth Phyllonorycter issikii, whose larvae damage leaves of lime trees Tilia spp., was only known from East Asia. In the last three decades, it has been recorded in most of Europe, Western Russia and Siberia. We used the mitochondrial cytochrome c oxidase subunit I (COI) gene region to compare the genetic variability of P. issikii populations between these different regions. Additionally, we sequenced two nuclear genes (28S rRNA and Histone 3) and run morphometric analysis of male genitalia to probe for the existence of cryptic species. The analysis of COI data of 377 insect specimens collected in 16 countries across the Palearctic revealed the presence of two different lineages: P. issikii and a putative new cryptic Phyllonorycter species distributed in the Russian Far East and Japan. In P. issikii, we identified 31 haplotypes among which 23 were detected in the invaded area (Europe) and 10 were found in its putative native range in East Asia (Russian Far East, Japan, South Korea and China), with only two common haplotypes. The high number of haplotypes found in the invaded area suggest a possible scenario of multiple introductions. One haplotype H1 was dominant (119 individuals, 67.2%), not only throughout its expanding range in Europe and Siberia but, intriguingly, also in 96% of individuals originating from Japan. We detected eight unique haplotypes of P. issikii in East Asia. Five of them were exclusively found in the Russian Far East representing 95% of individuals from that area. The putative new cryptic Phyllonorycter species showed differences from P. issikii for the three studied genes. However, both species are morphologically undistinguishable. They occur in sympatry on the same host plants in Japan (Sendai) and the Russian Far East (Primorsky krai) without evidence of admixture. © 2017 Kirichenko et al. This is an open access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.

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Держатели документа:
Sukachev Institute of Forest SB RAS, Federal Research Center Krasnoyarsk Science Center SB RAS, Krasnoyarsk, Russian Federation
Siberian Federal University, Krasnoyarsk, Russian Federation
INRA, UR0633 Zoologie Forestiere, Orleans, France
Museo Civico di Storia Naturale, Verona, Italy
Department of Life and Environmental Sciences, Kyoto Prefectural University, Kyoto, Japan
UMR CBGP (INRA, CIRAD, IRD, SupAgro), Montpellier, France
Department of Biological Science and Biotechnology, Hannam University, Daejeon, South Korea
College of Life Sciences, Nankai University, Tianjin, China
Institut de Recherche sur la Biologie de l'Insecte, CNRS UMR 7261, Universite Francois-Rabelais de Tours, UFR Sciences et Techniques, Tours, France

Доп.точки доступа:
Kirichenko, N.; Triberti, P.; Ohshima, I.; Haran, J.; Byun, B. -K.; Li, H.; Augustin, S.; Roques, A.; Lopez-Vaamonde, C.

/ N. Kirichenko, P. Triberti, C. Lopez-Vaamonde // ZooKeys. - 2019. - Is. 835. - P17-41, DOI 10.3897/zookeys.835.33166. - Cited References:43. - We thank Svetlana V Gorokhova (Russia) for organizing the field work in the Russian Far East, Svetlana V Baryshnikova (Russia) for checking the collection of the Zoological Institute, Russian Academy of Science for the presence of P. caraganella from its type location and for the fruitful discussions, Erik J van Nieukerken (The Netherlands), Ales Lastuvka, Zdenek Lastuvka (Czech Republic), Alain Cama (France), and Gerfried Deschka (Austria) for sharing specimens and/or DNA barcodes of some Fabaceae-feeding Phyllonorycter with us, Irina A Mikhailova (Russia) for the map construction, Vyacheslav I Zyryanov (Russia) for consultations on Photoshop, and Yuri N Baranchikov (Russia) for his support at different stages of the study. Special thanks to Erik J van Nieukerken, Camiel Doorenweerd (Hawaii, USA) and Zdenek Lastuvka for insightful comments and revision of the manuscript. NK was supported by the Russian Foundation for Basic Research (project No. 15-29-02645), LE STUDIUM (R) fellowship program, Institute for advanced studies - Loire Valley (Orleans, France) and the French Embassy in Russia, Bourse Metchnikov (grant No. 908981L, Campus France), and the EU program COST Action FP1401 "Global Warning: A Global Network of Nurseries as Early Warning System against Alien Tree Pests". . - ISSN 1313-2989. - ISSN 1313-2970РУБ Zoology

Аннотация: During a DNA barcoding campaign of leaf-mining Gracillariidae from the Asian part of Russia, a new species of Phyllonorycter Hubner, feeding on the Siberian pea shrub, Caragana arborescens Lam. (Fabaceae) was discovered in Siberia. Here, this taxon is described as Phyllonorycter ivani sp. n. Among Fabaceae-feeding Phyllonorycter, so far only P. caraganella (Ermolaev) has been known to develop on Caragana. Phyllonorycter ivani and P. caraganella show a large divergence in morphology (external and male genitalia) and barcode region of the mtDNA-COI gene (8.6%). They feed on different host plants species and have different ranges in Russia. We show that DNA barcode data weakly supports the Fabaceae-feeding species groups. In addition, we show that morphologically (strongly) and genetically (weakly), P. ivani has affinity to the haasi species group, a West Palearctic group with asymmetrical male genitalia.

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SB RAS, Sukachev Inst Forest, Akademgorodok 50-28, Krasnoyarsk 660036, Russia.
Siberian Fed Univ, 79 Svobodny Pr, Krasnoyarsk 660041, Russia.
INRA, Zool Forestiere UR0633, F-45075 Orleans, France.
Museo Civ Storia Nat, Lungadige Porta Vittoria 9, I-137129 Verona, Italy.
Univ Tours, UFR Sci & Tech, CNRS UMR 7261, Inst Rech Biol Insecte, F-37200 Tours, France.

Доп.точки доступа:
Kirichenko, Natalia; Triberti, Paolo; Lopez-Vaamonde, Carlos; Vaamonde, Carlos Lopez; Russian Foundation for Basic Research [15-29-02645]; LE STUDIUM(R) fellowship program, Institute for advanced studies - Loire Valley (Orleans, France); French Embassy in Russia; Bourse Metchnikov (Campus France) [908981L]; EU program COST Action [FP1401]

/ N. Kirichenko [et al.] // Zootaxa. - 2019. - Vol. 4652, Is. 1. - P1-55, DOI 10.11646/zootaxa.4652.1.1. - Cited References:116. - We thank the reviewers Svetlana Baryshnikova (Russia), Shigeki Kobayashi (Japan) and a third anonymous reviewer for their insightful comments, David Lees (UK) and Erik J. van Nieukerken (The Netherlands) for helping to improve the manuscript, Jurate De Prins (Belgium) for early editing and useful suggestions. We also thank our colleagues Peter Zorikov, Pavel Ostrogradsky (Gornotaezhnoe, Russia), Alexander Taran (Yuzhno-Sakhalinsk, Russia), the directorate and the foresters of the National Park "Zov Tigra" (Primorskii Krai, Russia) for their cooperation, Andrei Kirichenko (Komsomolsk-na-Amure, Russia) for assistance in the field, Irina Mikhailova (Krasnoayrsk, Russia) for help with map construction, Yuri Baranchikov (Krasnoyarsk, Russia) for support at different stages of the study. This work was supported by the Russian Foundation for Basic Research (projects nos 15-29-02645-ofi_m and 19-04-01029-A), LE STUDIUM (R) fellowship program, Institute for advanced studies-Loire Valley (Orleans, France), the French Embassy in Russia, Bourse Metchnikov (grant no. 908981L, Campus France) and Cost Action FP1401-A global network of nurseries as early warning system against alien tree pests (Global Warning). . - ISSN 1175-5326. - ISSN 1175-5334РУБ Zoology

Аннотация: The Russian Far East (RFE) is an important hotspot of biodiversity whose insect fauna remains understudied, particularly its Microlepidoptera. Here we explore the diversity of leaf-mining micromoths of the family Gracillariidae, their distribution and host plant associations in RFE using a combination of field observations and sampling, DNA barcoding, morphological analysis and literature review. We collected 91 gracillariid specimens (45 larvae, 9 pupae and 37 adults) in 12 localities across RFE and identified 34 species using a combination of DNA barcoding and morphology. We provide a genetic library of 57 DNA barcodes belonging to 37 Barcode Index Numbers (BINs), including four BINs that could potentially represent species new to science. Leaf mines and leaf shelters are described and illustrated for 32 studied species, male or female genitalia as well as forewing patterns of adults are shown, especially for those species identified based on morphology. Three species, Micrurapteryx caraganella (Hering), Callisto insperatella (Nickerl), and Phyllonorycter junoniella (Zeller) are newly recorded from RFE. Five species previously known from some regions of RFE, were found for the first time in Amurskaya Oblast: Phyllonorycter populifoliella (Treitschke), Primorskii Krai: Ph. sorbicola Kumata and Sahkalin Island: Caloptilia heringi Kumata, Ph. ermani (Kumata) and Ph. ulmifoliella (Hubner). Eight gracillariid-plant associations are novel to science: Caloptilia gloriosa Kumata on Acer pseudosieboldianum, Cameraria niphonica Kumata on A. caudatum subsp. ukurundense, Parornix ermolaevi Kuznetzov on Corylus sieboldiana, Phyllonorycter ermani (Kumata) on Betula platyphylla, Ph. nipponicella (Issiki) on Quercus mongolica, Ph. orientalis (Kumata) and Ph. pseudojezoniella Noreika on Acer saccharum, Ph. sorbicola on Prunus maakii. For the first time we documented the "green island" phenotype on Phyllonorycter cavella (Zeller) mines on Betula platyphylla. Two pestiferous species have been recorded during our surveys: Micrurapteryx caraganella on ornamental Caragana arborescens in urban plantations in Amurskaya Oblast, and the lime leafminer Phyllonorycter issikii (Kumata), a species known to be native to RFE and invasive elsewhere in Russia and in European countries. A revised checklist of RFE gracillariids has been compiled. It accounts for 135 species among which 17 species (13%) are only known to occur in RFE. The gracillariid fauna of RFE is more similar to the Japanese fauna (49%), than to the fauna of the rest of Russia (i.e European part and Siberia) (32%).

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Держатели документа:
SB RAS, Sukachev Inst Forest, Fed Res Ctr, Krasnoyarsk Sci Ctr, Krasnoyarsk 660036, Russia.
Siberian Fed Univ, Krasnoyarsk 660041, Russia.
INRA, Zool Forestiere UR0633, F-45075 Orleans, France.
Museo Civ Storia Nat, I-37129 Verona, Italy.
Russian Plant Quarantine Ctr, Krasnoyarsk Branch, Krasnoyarsk 660075, Russia.
Russian Acad Sci, Far Eastern Branch, Fed Sci Ctr East Asian Terr Biodivers, Vladivostok 690022, Russia.
Far Eastern Fed Univ, Vladivostok 690922, Russia.
Komarov Mt Taiga Stn FEB RAS, Gornotaezhnoe 692533, Russia.
Bot Garden Inst FEB RAS, Sakhalin Branch, Yuzhno Sakhalinsk 693032, Russia.
Kyoto Prefectural Univ, Dept Life & Environm Sci, Kyoto 6068522, Japan.
Univ Tours, UFR Sci & Tech, CNRS, IRBI,UMR 7261, F-37200 Tours, France.

Доп.точки доступа:
Kirichenko, Natalia; Triberti, Paolo; Akulow, Evgeniy; Ponomarenko, Margarita; Gorokhova, Svetlana; Sheiko, Viktor; Ohshima, Issei; Lopez-Vaamonde, Carlos; Russian Foundation for Basic Research [15-29-02645-ofi_m, 19-04-01029-A]; LE STUDIUM(R) fellowship program, Institute for advanced studies-Loire Valley (Orleans, France); French Embassy in Russia, Bourse Metchnikov [908981L]; Cost Action global network of nurseries as early warning system against alien tree pests (Global Warning) [FP1401-A]

/ C. Lopez-Vaamonde, N. Kirichenko, A. Cama [et al.] // Front. ecol. evol. - 2021. - Vol. 9. - Ст. 626752, DOI 10.3389/fevo.2021.626752 . - ISSN 2296-701X
Аннотация: Gracillariidae is the most species-rich leaf-mining moth family with over 2,000 described species worldwide. In Europe, there are 263 valid named species recognized, many of which are difficult to identify using morphology only. Here we explore the use of DNA barcodes as a tool for identification and species discovery in European gracillariids. We present a barcode library including 6,791 COI sequences representing 242 of the 263 (92%) resident species. Our results indicate high congruence between morphology and barcodes with 91.3% (221/242) of European species forming monophyletic clades that can be identified accurately using barcodes alone. The remaining 8.7% represent cases of non-monophyly making their identification uncertain using barcodes. Species discrimination based on the Barcode Index Number system (BIN) was successful for 93% of species with 7% of species sharing BINs. We discovered as many as 21 undescribed candidate species, of which six were confirmed from an integrative approach; the other 15 require additional material and study to confirm preliminary evidence. Most of these new candidate species are found in mountainous regions of Mediterranean countries, the South-Eastern Alps and the Balkans, with nine candidate species found only on islands. In addition, 13 species were classified as deep conspecific lineages, comprising a total of 27 BINs with no intraspecific morphological differences found, and no known ecological differentiation. Double-digest restriction-site associated DNA sequencing (ddRAD) analysis showed strong mitonuclear discrepancy in four out of five species studied. This discordance is not explained by Wolbachia-mediated genetic sweeps. Finally, 26 species were classified as “unassessed species splits” containing 71 BINs and some involving geographical isolation or ecological specialization that will require further study to test whether they represent new cryptic species. © Copyright © 2021 Lopez-Vaamonde, Kirichenko, Cama, Doorenweerd, Godfray, Guiguet, Gomboc, Huemer, Landry, Lastuvka, Lastuvka, Lee, Lees, Mutanen, van Nieukerken, Segerer, Triberti, Wieser and Rougerie.

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Держатели документа:
INRAE, URZF, Orleans, France
IRBI, UMR 7261, CNRS-Universite de Tours, Tours, France
Sukachev Institute of Forest, Siberian Branch of Russian Academy of Sciences, Federal Research Center “Krasnoyarsk Science Center SB RAS, Krasnoyarsk, Russian Federation
Siberian Federal University, Krasnoyarsk, Russian Federation
La Chapelle sur Loire, France
Department of Plant and Environmental Protection Sciences, College of Tropical Agriculture and Human Resources, University of Hawaii, Honolulu, HI, United States
Naturalis Biodiversity Center, Leiden, Netherlands
Department of Zoology, University of Oxford, Oxford, United Kingdom
Department of Biology, The Pennsylvania State University, University Park, PA, United States
Gancani, Beltinci, Slovenia
Tiroler Landesmuseen Betriebsges.m.b.H, Sammlungs- und Forschungszentrum, Hall in Tirol, Austria
Agriculture and Agri-Food Canada, Ottawa Research and Development Centre, Ottawa, ON, Canada
Prostejov, Czech Republic
Faculty of Agronomy, Mendel University, Brno, Czech Republic
Ecology and Genetics Research Unit, University of Oulu, Oulu, Finland
Department of Life Sciences, Natural History Museum, London, United Kingdom
Staatliche Naturwissenschaftliche Sammlungen Bayerns, Zoologische Staatssammlung Munchen (SNSB-ZSM), Munich, Germany
Museo Civico di Storia Naturale, Zoologia, Verona, Italy
Landesmuseum fur Karnten, Abteilung Zoologie, Sammlungs- und Wissenschaftszentrum, Klagenfurt, Austria
Institut de Systematique, Museum national d’Histoire naturelle, CNRS, Sorbonne Universite, EPHE, Universite des Antilles, Paris, France

Доп.точки доступа:
Lopez-Vaamonde, C.; Kirichenko, N.; Cama, A.; Doorenweerd, C.; Godfray, H. C.J.; Guiguet, A.; Gomboc, S.; Huemer, P.; Landry, J. -F.; Lastuvka, A.; Lastuvka, Z.; Lee, K. M.; Lees, D. C.; Mutanen, M.; van Nieukerken, E. J.; Segerer, A. H.; Triberti, P.; Wieser, C.; Rougerie, R.

/ C. Lopez-Vaamonde, N. Kirichenko, A. Cama [et al.] // Front. Ecol. Evol. - 2021. - Vol. 9. - Ст. 626752, DOI 10.3389/fevo.2021.626752. - Cited References:88. - This work was funded by the Studium (France) to both NK and DL to work as research fellows at INRAE Orleans; the Russian Foundation for Basic Research (No. 19-04-01029-a) and the basic project of Sukachev Institute of Forest SB RAS (project No. 0287-2021-0011) to NK; the Region Centre (France) project ENDOFEED (201000047141) to CL-V; the Ministry of Agriculture (France) project PASSIFOR to CL-V and RR; the Academy of Finland (grant number: 277984) to MM and the Kvantum Institute to KL; Kone foundation, Finnish Cultural foundation for financing the FinBOL (Finnish Barcode of Life) 2011-2015, and the Academy of Finland for financing FinBOL through the FinBIF national infrastructure project since 2014; Agriculture & Agri-Food Canada, Science and Technology Branch (projects Nos. J-000977 and J-002279) to J-FL; Promotion of Educational Policies, University and Research Department of the Autonomous Province of Bolzano - South Tyrol and Austrian Federal Ministry of Science, Research and Economics in the framework of ABOL (Austrian Barcode of Life) to PH. CD's salary and all DNA sequencing at Naturalis Biodiversity Center was funded through the Dutch Economic Restructuring Fund (FES). AS was supported by the Bavarian Ministry of Science and Art (Germany) project BFB and the Federal Ministry of Education and Research (Germany) project GBOL. Funding for DNA barcoding was also partly provided by the Government of Canada through Genome Canada, the Ontario Genomics Institute in support of the International Barcode of Life project, and by the National Science and Engineering Research Council of Canada. . - ISSN 2296-701XРУБ Ecology

Аннотация: Gracillariidae is the most species-rich leaf-mining moth family with over 2,000 described species worldwide. In Europe, there are 263 valid named species recognized, many of which are difficult to identify using morphology only. Here we explore the use of DNA barcodes as a tool for identification and species discovery in European gracillariids. We present a barcode library including 6,791 COI sequences representing 242 of the 263 (92%) resident species. Our results indicate high congruence between morphology and barcodes with 91.3% (221/242) of European species forming monophyletic clades that can be identified accurately using barcodes alone. The remaining 8.7% represent cases of non-monophyly making their identification uncertain using barcodes. Species discrimination based on the Barcode Index Number system (BIN) was successful for 93% of species with 7% of species sharing BINs. We discovered as many as 21 undescribed candidate species, of which six were confirmed from an integrative approach; the other 15 require additional material and study to confirm preliminary evidence. Most of these new candidate species are found in mountainous regions of Mediterranean countries, the South-Eastern Alps and the Balkans, with nine candidate species found only on islands. In addition, 13 species were classified as deep conspecific lineages, comprising a total of 27 BINs with no intraspecific morphological differences found, and no known ecological differentiation. Double-digest restriction-site associated DNA sequencing (ddRAD) analysis showed strong mitonuclear discrepancy in four out of five species studied. This discordance is not explained by Wolbachia-mediated genetic sweeps. Finally, 26 species were classified as "unassessed species splits" containing 71 BINs and some involving geographical isolation or ecological specialization that will require further study to test whether they represent new cryptic species.

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Держатели документа:
URZF, INRAE, Orleans, France.
Univ Tours, IRBI, UMR 7261, CNRS, Tours, France.
RAS, SB, Sukachev Inst Forest, Fed Res Ctr,Krasnoyarsk Sci Ctr, Krasnoyarsk, Russia.
Siberian Fed Univ, Krasnoyarsk, Russia.
Univ Hawaii, Coll Trop Agr & Human Resources, Dept Plant & Environm Protect Sci, Honolulu, HI USA.
Nat Biodivers Ctr, Leiden, Netherlands.
Univ Oxford, Dept Zool, Oxford, England.
Penn State Univ, Dept Biol, University Pk, PA 16802 USA.
Gancani, Beltinci, Slovenia.
Tiroler Landesmuseen BetriebsgesmbH Sammlungs & F, Hall In Tirol, Austria.
Agr & Agri Food Canada, Ottawa Res & Dev Ctr, Ottawa, ON, Canada.
Mendel Univ Brno, Fac Agron, Brno, Czech Republic.
Univ Oulu, Ecol & Genet Res Unit, Oulu, Finland.
Nat Hist Museum, Dept Life Sci, London, England.
Staatliche Nat Wissensch Sammlungen Bayerns, Zool Staatssammlung Munchen SNSB ZSM, Munich, Germany.
Museo Civ Storia Nat, Zool, Verona, Italy.
Landesmuseum Karnten, Abt Zool Sammlungs & Wissensch Zentrum, Klagenfurt, Austria.
Univ Antilles, Inst Systemat Evolut Biodivers ISYEB, Museum Natl Hist Nat, CNRS,Sorbonne Univ,EPHE, Paris, France.

Доп.точки доступа:
Lopez-Vaamonde, Carlos; Kirichenko, Natalia; Cama, Alain; Doorenweerd, Camiel; Godfray, H. Charles J.; Guiguet, Antoine; Gomboc, Stanislav; Huemer, Peter; Landry, Jean-Francois; Lastuvka, Ales; Lastuvka, Zdenek; Lee, Kyung Min; Lees, David C.; Mutanen, Marko; van Nieukerken, Erik J.; Segerer, Andreas H.; Triberti, Paolo; Wieser, Christian; Rougerie, Rodolphe; Studium (France); Russian Foundation for Basic ResearchRussian Foundation for Basic Research (RFBR) [19-04-01029-a]; basic project of Sukachev Institute of Forest SB RAS [0287-2021-0011]; Region Centre (France) project ENDOFEED [201000047141]; Ministry of Agriculture (France) project PASSIFOR; Academy of FinlandAcademy of FinlandEuropean Commission [277984]; Kone foundation; Finnish Cultural foundationFinnish Cultural Foundation; Agriculture & Agri-Food Canada, Science and Technology Branch [J-000977, J-002279]; Promotion of Educational Policies, University and Research Department of the Autonomous Province of Bolzano - South TyrolPronvincia Autonoma di Bolzano; Austrian Federal Ministry of Science, Research and Economics in the framework of ABOL; Dutch Economic Restructuring Fund (FES); Bavarian Ministry of Science and Art (Germany) project BFB; Federal Ministry of Education and Research (Germany) project GBOL; Government of Canada through Genome CanadaGenome Canada; Ontario Genomics Institute in support of the International Barcode of Life project; National Science and Engineering Research Council of CanadaNatural Sciences and Engineering Research Council of Canada (NSERC); Kvantum Institute; Academy of FinlandAcademy of FinlandEuropean Commission