Труды сотрудников ИЛ им. В.Н. Сукачева СО РАН

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Найдено документов в текущей БД: 28

    Individual variability in the composition of volatile secretions of scots pine needles in populations of Khakassia and Tuva
/ I. V. Tikhonova [et al.] // Contemp. Probl. Ecol. - 2012. - Vol. 5, Is. 3. - P292-299, DOI 10.1134/S1995425512030171. - Cited References: 31. - This work was supported in part by the Russian Foundation for Basic Research (projects no. 11-04-98008-r_Sibir'_a and no. 11-04-92226_Mongoliya_a). . - 8. - ISSN 1995-4255
РУБ Ecology
Рубрики:
LOBLOLLY-PINE
   INNER BARK

   MONOTERPENES

Кл.слова (ненормированные):
Scots pine -- composition of terpenoids -- individual variability

Аннотация: The results of the study of the qualitative composition and relative content of highly volatile compounds from the needles in two natural pine populations located in the forest-steppe zone in the south of Central Siberia are presented. Altogether, 89 components were isolated. Analysis of intra- and interpopulation variability of 31 terpenoids (mono- and sesquiterpene fractions) was conducted. The spatial structure of the variance of features was analyzed. Significant interpopulation differences in the content of most compounds were registered. It was determined that, as growing conditions deteriorate, the mass fraction of lighter monoterpene compounds (especially alpha-pinene) is increased within populations, and qualitative diversity of the components of essential oils is decreased. The groups of terpenoids, the relative content of which is to a different degree associated with interpopulation differences and variety of the growing conditions of trees within populations, were isolated.

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Держатели документа:
[Tikhonova, I. V.
Aniskina, A. A.
Mukhortova, L. V.
Loskutov, S. R.] Russian Acad Sci, Siberian Branch, Sukachev Inst Forest, Krasnoyarsk 660036, Russia

Доп.точки доступа:
Tikhonova, I.V.; Aniskina, A.A.; Mukhortova, L.V.; Loskutov, S.R.

    Individual sensitivity of Larix sibirica L. in open woodland of the Shira forest-steppe
[Text] / I. . Tikhonova, O. . Stolyarova // Contemp. Probl. Ecol. - 2008. - Vol. 1, Is. 6. - P682-686, DOI 10.1134/S1995425508060118. - Cited References: 29. - The work was partly supported by Integration Project no. 53 of SB RAS. . - 5. - ISSN 1995-4255
РУБ Ecology

Аннотация: Some indices of individual variability in annual growth of Siberian larch in open woodlands of Khakassia are compared. In the Shira forest-steppe the Siberian larch exhibits high sensitivity of annual growth and diverse responses to changes in vegetative conditions. Stabilizing selection maintains dominance of trees with moderately sensitive annual growth. Such trees are the most vital. It has been shown that the adaptive norm of population's response and the individual variability of annual growth positively correlate with the total annual precipitation. The sensitivity index of annual growth is a better indicator of the genetic structure of the population than the coefficient of variability of annual growth indices.

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Держатели документа:
[Tikhonova, I. V.
Stolyarova, O. A.] RAS, Siberian Branch, Sukachev Inst Forest, Krasnoyarsk 660036, Russia

Доп.точки доступа:
Tikhonova, I...; Stolyarova, O...

    Transformation of climatic response in radial increment of trees depending on topoecological conditions of their occurrence
/ E. A. Babushkina [et al.] // Geography and Natural Resources. - 2011. - Vol. 32, Is. 1. - P80-86, DOI 10.1134/S1875372811010148 . - ISSN 1875-3728
Аннотация: We report the research results derived from identifying the regional climatic signal contained in the coniferous tree ring-width variability for different topoecological conditions in the forest-steppe of the Republic of Khakassia. It is found that under different growth conditions for trees of the same species the climatic signal undergoes a significant transformation. We demonstrate the possibility of using a combination of tree-ring chronologies of different tree species for an adequate dendroclimatic reconstruction of the leading climatic variables. В© 2011 Pleiades Publishing, Inc.

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Держатели документа:
Siberian Federal University, Krasnoyarsk, Russian Federation
Institute of Forest, Siberian Branch, Russian Academy of Sciences, Krasnoyarsk, Russian Federation

Доп.точки доступа:
Babushkina, E.A.; Knorre, A.A.; Vaganov, E.A.; Bryukhanova, M.V.

    Population variability of cones and seeds of scots pine by phenes of color and traits-indices in the south of Siberia
/ I. V. Tikhonova [et al.] // Contemp. Probl. Ecol. - 2014. - Vol. 7, Is. 1. - P60-66, DOI 10.1134/S1995425514010156 . - ISSN 1995-4255

Кл.слова (ненормированные):
cones -- phenotypic variability -- populations of Scots pine -- seeds -- Southern Siberia

Аннотация: Studies of the phenotypic variability of cones and seeds of trees in terms of five index and six qualitative traits in the populations of Scots pine in the south of Krasnoyarsk krai, Khakassia, Tuva, and Buryatia are carried out using techniques of A.I. Vidyakin (2004). The population level of seven traits and validity of their use as markers of genetic variability in Southern Siberian pine populations is confirmed. В© 2014 Pleiades Publishing, Ltd.

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Держатели документа:
Sukachev Institute of Forest, Siberian Branch, Russian Academy of Sciences, Akademgorodok 50/28, Krasnoyarsk, 660036, Russian Federation

Доп.точки доступа:
Tikhonova, I.V.; Tarakanov, V.V.; Tikhonova, N.A.; Barchenkov, A.P.; Ekart, A.K.

    Genetic diversity and differentiation of populations of scots pine in Southern Siberia and Mongolia
/ A. K. Ekart [et al.] // Contemp. Probl. Ecol. - 2014. - Vol. 7, Is. 1. - P52-59, DOI 10.1134/S1995425514010041 . - ISSN 1995-4255

Кл.слова (ненормированные):
differentiation -- genetic diversity -- isoenzymic loci -- Mongolia -- pine -- Southern Siberia

Аннотация: This paper presents the results of studying the genetic diversity, structure, and degree of differentiation of island populations of Scots pine (Pinus sylvestris L.) growing in Southern Siberia (south of Krasnoyarsk krai, Khakassia, Tuva, and Buryatia) in the northeastern part of Mongolia, which were obtained on the basis of an analysis of 20 isoenzymic loci. В© 2014 Pleiades Publishing, Ltd.

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Держатели документа:
Sukachev Institute of Forest, Siberian Branch, Russian Academy of Sciences, Akademgorodok 50/28, Krasnoyarsk, 660036, Russian Federation
West Siberian Division of the Sukachev Forest Institute, Siberian Branch, Russian Academy of Sciences, ul. Zhukovskogo 100/1, Novosibirsk, 630082, Russian Federation
Institute of Botany, Mongolian Academy of Sciences, Ulan Bator, 210523, Mongolia

Доп.точки доступа:
Ekart, A.K.; Larionova, A.Y.; Zatsepina, K.G.; Kravchenko, A.N.; Zhamyansuren, S.; Tikhonova, I.V.; Tarakanov, V.V.

    Analysis of content of (-)-secoisolariciresinol and related polyphenols in different morphological parts and anatomical structures of larch wood from Siberia
[Text] / D. V. Yashunsky [et al.] // Russ. Chem. Bull. - 2015. - Vol. 63, Is. 11. - P2571-2576, DOI 10.1007/s11172-014-0780-7. - Cited References:18. - This work was financially supported by the Russian Foundation for Basic Research (Project No. 14-33-00022). . - ISSN 1066-5285. - ISSN 1573-9171
РУБ Chemistry, Multidisciplinary

Кл.слова (ненормированные):
(-)-secoisolariciresinol -- dihydroquercetin -- knot areas of the larch wood

Аннотация: Productive efficiency of technology of polysaccharide and lignin manufacturing from wood raw materials can be significantly improved by integration of purification stages of low molecular weight wood components widely used in applied chemistry into the technological cycle. In this connection, phenols including lignans and flavonoids, which have a practical application potential, are of a special interest. In the present work the results of a study of the content of (-)-secoisolariciresinol, dihydroquercetin and related polyphenols in different morphological parts and anatomical structures of larch wood from the Siberia are analyzed. Analysis of the content of the listed products by reversed-phase HPLC provides the selection of optimal raw material for organizing the manufacture of the listed compounds with predictable efficiency. Increased content of (-)-secoisolariciresinol (up to 3-4%) observed in wood of the trunk knot areas of larch from Khakassia evidences the prospects of raw material processing in this region for production of (-)-secoisolariciresinol from the wastes of larch wood refinery.

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Держатели документа:
Russian Acad Sci, ND Zelinsky Inst Organ Chem, Moscow 119991, Russia.
VN Orekhovich Inst Biomed Chem, Moscow 119121, Russia.
D Mendeleev Univ Chem Technol Russia, Moscow 125047, Russia.
Closed Joint Stock Co BioKhimMak ST, Moscow 119234, Russia.
Russian Acad Sci, VN Sukachev Forest Inst, Siberian Branch, Krasnoyarsk 660036, Russia.
Ufa State Aviat Tech Univ, Ufa 450000, Russia.

Доп.точки доступа:
Yashunsky, D. V.; Men'shov, V. M.; Tsvetkov, D. E.; Tsvetkov, Yu. E.; Bel'ko, A. A.; Vasiyarov, G. G.; Titova, E. V.; Pimenov, A. V.; Onuchin, A. A.; Dokichev, V. A.; Tomilov, Yu. V.; Nifantiev, N. E.; Russian Foundation for Basic Research [14-33-00022]

    Distribution of Lophodermium needle cast agents in Scots pine stands in Middle Siberia
/ N. A. Kuzmina, V. A. Senashova, S. R. Kuzmin // Contemp. Probl. Ecol. - 2015. - Vol. 8, Is. 7. - P909-915, DOI 10.1134/S1995425515070082 . - ISSN 1995-4255

Кл.слова (ненормированные):
distribution -- forest districts and plantations -- Lophodermium needle cast -- provenance trial -- Scots pine -- Fungi -- Lophodermium -- Pinus sylvestris

Аннотация: Geography of the Scots pine disease, caused by Lophodermium fungi, was analyzed in Krasnoyarsk krai and Khakassia in 1997–2010. Most of the loci were located in taiga; less frequently they occurred in mountain taiga and mountain chern altitudinal belts. Rarely the disease was noted in forest-steppe zone of subboreal forests. The disease dynamics is cyclic; in recent years the wide extension of the pathogen across the studied region was detected. Needle cast is a serious danger for pine grown from seeds from the other regions, especially seeds of western or southern origin. © 2015, Pleiades Publishing, Ltd.

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Держатели документа:
V.N. Sukachev Institute of Forest, Siberian Branch, Russian Academy of Sciences, Akademgorodok 50/28, Krasnoyarsk, Russian Federation

Доп.точки доступа:
Kuzmina, N. A.; Senashova, V. A.; Kuzmin, S. R.

    Disequilibrium distribution of genotypes in the pairs of isozyme loci in the pine populations of the forest-steppe regions of Siberia
/ I. V. Tikhonova [et al.] // Russ. J. Gen. - 2016. - Vol. 52, Is. 9. - P926-938, DOI 10.1134/S1022795416090155 . - ISSN 1022-7954

Кл.слова (ненормированные):
allozymes -- climate -- morphological variability -- nonrandom association of loci -- Pinus sylvestris -- southern Siberia

Аннотация: We performed an analysis of linkage disequilibrium of alleles of 15 allozyme loci in 35 populations of Scots pine in the Siberian part of the range between 50° and 56° N and 79° and 107° E. We found a significant deviation in the distribution of genotypes of 1–9 pairs of loci in the investigated samples. We established correlations between frequencies of certain pairs of linked loci with ecological conditions and geographical coordinates of habitats of the pine populations. We present the results of comparative analysis of the differences in certain morphological features of trees with significantly predominant genotypes for pairs of linked loci in three isolated populations: in the south of Krasnoyarsk krai, Khakassia, and Tuva. © 2016, Pleiades Publishing, Inc.

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Держатели документа:
Sukachev Institute of Forest, Siberian Branch, Russian Academy of Sciences, Krasnoyarsk, Russian Federation

Доп.точки доступа:
Tikhonova, I. V.; Ekart, A. K.; Kravchenko, A. N.; Zatsepina, K. G.

    Soil Biogenecity as an Indicator of Sustainability of Artificial Forest Plantations under Dry-Steppe Conditions in Khakassia
/ N. D. Sorokin, O. A. Sorokina, V. A. Senashova // Biol. Bull. - 2017. - Vol. 44, Is. 3. - P337-343, DOI 10.1134/S1062359017030098. - Cited References:15 . - ISSN 1062-3590. - ISSN 1026-3470
РУБ Biology

Аннотация: Reforestation is very important in controlling land degradation and desertification. It has been established that the early diagnostics of the forest-growth conditions of soils and sustainability of forest plantations can be estimated by biogenic factors, such as the structure, dynamics, and functional activity of microbial complexes closely related to agrochemical soil indicators. The survival and sustainability of experimental forest plantations that were established in 1975 to 1978 on erosion-prone lands in the coastal zone of Shira Lake (Khakassia) have been studied. The forest growing properties of soils and the transformation of their fertility under the influence of stands have been evaluated.

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Держатели документа:
Russian Acad Sci, Sukachev Inst Forestry, Siberian Branch, Akademgorodok 50-28, Krasnoyarsk 660036, Russia.
Krasnoyarsk State Agrarian Univ, Pr Mira 50, Krasnoyarsk 660049, Russia.

Доп.точки доступа:
Sorokin, N. D.; Sorokina, O. A.; Senashova, V. A.

    Variation of the hydrological regime of Bele-Shira closed basin in Southern Siberia and its reflection in the radial growth of Larix sibirica
/ E. A. Babushkina [et al.] // Reg. Envir. Chang. - 2017. - Vol. 17, Is. 6. - P1725-1737, DOI 10.1007/s10113-017-1137-1. - Cited References:41. - This study was funded by the Russian Foundation for Basic Research and the Republic of Khakassia according to the research Projects No. 14-44-04043 and No. 15-05-01666. We also thank anonymous reviewers and editor Wolfgang Cramer for their helpful comments. . - ISSN 1436-3798. - ISSN 1436-378X
РУБ Environmental Sciences + Environmental Studies

Аннотация: This study analyses dynamics of the hydrological regime of Bele-Shira closed basin and evaluates the potential for using radial growth of Siberian larch (Larix sibirica) for its assessment. We investigated the relationships between different characteristics of the water level variation of Lake Shira, precipitation amount and long-term regional chronologies developed from 56 living trees and 32 dead trees on three sites across this basin. Graphical and correlation analysis indicate that the interannual change (June minus previous June) of the water level of Lake Shira is strongly positively related to the annual sum of precipitation from July to June and the radial growth of larch. It was shown that this hydrological characteristic integrates the current dynamics of the regional precipitation and moisture regime as a whole of the Bele-Shira closed basin on interannual and decadal scales. The water level of Lake Shira fluctuates on a multi-year timescale in synchrony with the cumulative sum of the tree-ring chronology and also has strong positive long-term trend, probably driven by the continual groundwater inflow from neighboring Lake Itkul. Delayed relationships of precipitation and radial growth with the Lake Shira level change are interpreted with reference to a water balance model of the closed basin. Results offer the possibility of reconstructing interannual and decadal variation of the hydrological regime during the last few centuries through regression models using tree-ring chronologies or the dynamics of climatic variables recovered from them.

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Держатели документа:
Siberian Fed Univ, Khakass Tech Inst, 27 Shchetinkina St, Abakan 655017, Russia.
Russian Acad Sci, Inst Geog, 29 Staromonetniy Pereulok, Moscow 119017, Russia.
Univ Arizona, Tree Ring Res Lab, 1215 E Lowell St,Box 210045, Tucson, AZ 85721 USA.
Siberian Fed Univ, 79 Pr Svobodniy, Krasnoyarsk 660041, Russia.
Russian Acad Sci, Siberian Branch, VN Sukachev Inst Forest, 50-28 Akademgorodok, Krasnoyarsk 660036, Russia.

Доп.точки доступа:
Babushkina, Elena A.; Belokopytova, Liliana V.; Grachev, Alexi M.; Meko, David M.; Vaganov, Eugene A.; Russian Foundation for Basic Research; Republic of Khakassia [14-44-04043, 15-05-01666]

    Contribution to the Microlepidoptera Fauna of the South of Krasnoyarsk Territory and the Republic of Khakassia
/ E. N. Akulov, N. I. Kirichenko, M. G. Ponomarenko // Entomol. Rev. - 2018. - Vol. 98, Is. 1. - P49-75, DOI 10.1134/S0013873818010074 . - ISSN 0013-8738

Аннотация: This paper provides a list of 125 species from 22 families of Microlepidoptera collected in the south of Krasnoyarsk Territory and in the Republic ofKhakassia, with 63 species (50%) and 2 families (Bucculatricidae and Elachistidae) recorded in the region for the first time, and 11 species from 6 families being new to Siberia: Cauchas fibulella, Nemophora fasciella, N. minimella (Adelidae), Phyllonorycter sorbicola, Phyllocnistis extrematrix (Gracillariidae), Cosmiotes freyerella, Elachista subocellea (Elachistidae), Caryocolum alsinella, Scrobipalpula diffluella (Gelechiidae), Agonopterix intersecta (Depressariidae), and Ypsolopha horridella (Ypsolophidae). Three species are new to science: Phyllonorycter sp. and Phyllocnistis verae (Gracillariidae) from the suburbs of Krasnoyarsk and Chrysoesthia sp. (Gelechiidae) from the Republic of Khakassia. Almost half of the faunistic findings belong to two families, Gelechiidae (34 species) and Gracillariidae (24 species). In the former family, the number of species distributed in Krasnoyarsk Territory and/or Khakassia was increased by 1.5 times based on our collection. Trophic specialization remains unknown only for 7 of the 125 species. Most (90%) of the remaining 118 species are phytophagous, the others are saprophagous; 53 species are known as leaf miners. Phytophagous species feed on plants of 36 families and 21 orders. The largest number of microlepidopteran species inhabit plants of the orders Rosales and Fagales (25 and 24 species, respectively). Twelve species are known as pests: Tineidae (4 species), Gracillariidae, Gelechiidae (2 species in each), Argyresthiidae, Choreutidae, Lyonetiidae, and Plutellidae (one species in each). Four pest species have expanded beyond the Palaearctic in the last century: Choreutis pariana (Choreutidae), Scrobipalpa atriplicella (Gelechiidae), Plutella xylostella (Plutellidae), and Niditinea fuscella (Tineidae). © 2018, Pleiades Publishing, Inc.

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Держатели документа:
Russian Plant Quarantine Center, Krasnoyarsk Branch, Krasnoyarsk, Russian Federation
Sukachev Institute of Forest, Siberian Branch of Russian Academy of Sciences, Federal Research Center “Krasnoyarsk Science Center SB RAS,”, Krasnoyarsk, Russian Federation
Siberian Federal University, Krasnoyarsk, Russian Federation
Federal Research Center for East Asian Terrestrial Biodiversity, Far Eastern Branch of Russian Academy of Sciences, Vladivostok, Russian Federation
Far Eastern Federal University, Vladivostok, Russian Federation

Доп.точки доступа:
Akulov, E. N.; Kirichenko, N. I.; Ponomarenko, M. G.

    Modeled Tracheidograms Disclose Drought Influence on Pinus sylvestris Tree-Rings Structure From Siberian Forest-Steppe
/ M. I. Popkova [et al.] // Front. Plant Sci. - 2018. - Vol. 9. - Ст. 1144, DOI 10.3389/fpls.2018.01144. - Cited References:65. - The work was supported by the Russian Science Foundation (project #14-14-00219 P for simulation approach), the Le Studium/Marie Sklodowska-Curie research fellowship, the State assignment "Science of Future" (project #5.3508.2017/4.6 for data analysis), the Swiss National Science Foundation projects (LOTFOR no. 150205 and the International short visit no. IZK0Z2_16719), as well as the Russian Foundation for Basic Research (project #17-04-00315 for sampling and measurements; project #17-04-00610 for xylogenesis sampling and data; project #18-34-00530 for time-assignment procedure). . - ISSN 1664-462X
РУБ Plant Sciences

Аннотация: Wood formation allows trees to adjust in a changing climate. Understanding what determine its adjustment is crucial to evaluate impacts of climatic changes on trees and forests growth. Despite efforts to characterize wood formation, little is known on its impact on the xylem cellular structure. In this study we apply the Vaganov-Shashkin model to generate synthetic tracheidograms and verify its use to investigate the formation of intra-annual density fluctuations (IADF), one of the most frequent climate tree-ring markers in drought-exposed sites. Results indicate that the model can produce realistic tracheidograms, except for narrow rings (< 1 mm), when cambial activity stops due to an excess of drought or a lack of growth vigor. These observations suggest that IADFs are caused by a release of drought limitation to cells formation in the first half of the growing season, but that narrow rings are indicators of an even more extreme and persistent water stress. Taking the example of IADFs formation, this study demonstrated that the Vaganov-Shashkin model is a useful tool to study the climatic impact on tree-ring structures. The ability to produce synthetic tracheidogram represents an unavoidable step to link climate to tree growth and xylem functioning under future scenarios.

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Держатели документа:
Siberian Fed Univ, Dept Math Methods & Informat Technol, Krasnoyarsk, Russia.
Siberian Fed Univ, Krasnoyarsk, Russia.
SB RAS, VN Sukachev Inst Forest, Krasnoyarsk, Russia.
LE STUDIUM Loire Valley Inst Adv Studies, Orleans, France.
Siberian Fed Univ, Khakassia Tech Inst, Abakan, Russia.
Univ Quebec Chicoutimi, Dept Sci Fondamentales, Chicoutimi, PQ, Canada.
Chinese Acad Sci, Key Lab Vegetat Restorat & Management Degraded Ec, Guangdong Prov Key Lab Appl Bot, South China Bot Garden, Guangzhou, Guangdong, Peoples R China.
Siberian Fed Univ, Inst Ecol & Geog, Krasnoyarsk, Russia.
WSL Swiss Fed Res Inst, Landscape Dynam, Birmensdorf, Switzerland.

Доп.точки доступа:
Popkova, Margarita, I; Vaganov, Eugene A.; Shishov, Vladimir V.; Babushkina, Elena A.; Rossi, Sergio; Fonti, Marina, V; Fonti, Patrick; Russian Science Foundation [14-14-00219 P]; Le Studium/Marie Sklodowska-Curie research fellowship; State assignment "Science of Future" [5.3508.2017/4.6]; Swiss National Science Foundation (LOTFOR) [150205]; Swiss National Science Foundation [IZK0Z2_16719]; Russian Foundation for Basic Research [17-04-00315, 17-04-00610, 18-34-00530]

    Pine and larch tracheids capture seasonal variations of climatic signal at moisture-limited sites
/ L. V. Belokopytova [et al.] // Trees Struct. Funct. - 2018, DOI 10.1007/s00468-018-1772-2 . - Article in press. - ISSN 0931-1890
Аннотация: Key message: Although the radial diameter and wall thickness of conifer tracheids from dry environments are climatic-sensitive across the full ring area, each cell parameter has a specific zone in a ring where its climatic response reaches the maximum. Abstract: Seasonal dynamics of the timing and rate in cell production and differentiation imprint climate signals into intra-ring variations of anatomical wood structure (e.g. intra-annual density fluctuations). Despite recent methodological advances in quantitative wood anatomy, our understanding of xylem response to climate at the finest scale of intra-ring resolution is incomplete. The goal of this study is to investigate intra-ring changes of tracheid dimensions (cell radial diameter and wall thickness) controlled by moisture stress. Anatomical wood parameters of Pinus sylvestris and Larix sibirica from two drought-susceptible locations in Khakassia, South Siberia, were analysed. We found that inter-annual variation of tracheid parameters regularly exceeds the variation between radial tracheid files. This suggests that the climatic signal is recorded throughout the entire ring. However, each cell parameter has a specific zone in the ring where its climatic response reaches the maximum. The climatic response of the radial cell diameter has a temporal shift across the ring, which is particularly apparent in pine rings. The climatic response of cell wall thickness at the intra-ring scale has a more complex pattern. Our results facilitate investigation of the climate impact on tree rings at the finest intra-ring scale by quantifying the timing of climatic impact on ring structure and identifying specifically when climate impacts the formation of a particular cell. © 2018, Springer-Verlag GmbH Germany, part of Springer Nature.

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Держатели документа:
Khakass Technical Institute, Siberian Federal University, 27 Shchetinkina St, Abakan, 655017, Russian Federation
Laboratory of Tree-Ring Research, University of Arizona, 1215 W. Lowell St, Tucson, AZ 85721, United States
Siberian Federal University, 79 Svobodny Pr., Krasnoyarsk, 660041, Russian Federation
V. N. Sukachev Institute of Forest, SB RAS, 50/28 Akademgorodok, Krasnoyarsk, 660036, Russian Federation

Доп.точки доступа:
Belokopytova, L. V.; Babushkina, E. A.; Zhirnova, D. F.; Panyushkina, I. P.; Vaganov, E. A.

    Siberian larch (Larix sibirica Ledeb.) chloroplast genome and development of polymorphic chloroplast markers
/ E. I. Bondar [et al.] // BMC Bioinformatics. - 2019. - Vol. 20: 11th International Multiconference on Bioinformatics of Genome (AUG 20-25, 2018, Novosibirsk, RUSSIA). - Ст. 38, DOI 10.1186/s12859-018-2571-x. - Cited References:25. - The presented study was a part of the project "Genomic studies of major boreal coniferous forest tree species and their most dangerous pathogens in the Russian Federation" funded by the Government of the Russian Federation (grant No 14.Y26.31.0004). Publication costs are funded by the BioMed Central Membership of the University of Gottingen. . - ISSN 1471-2105
РУБ Biochemical Research Methods + Biotechnology & Applied Microbiology

Аннотация: BackgroundThe main objectives of this study were sequencing, assembling, and annotation of chloroplast genome of one of the main Siberian boreal forest tree conifer species Siberian larch (Larix sibirica Ledeb.) and detection of polymorphic genetic markers - microsatellite loci or simple sequence repeats (SSRs) and single nucleotide polymorphisms (SNPs).ResultsWe used thedata of the whole genome sequencing of three Siberian larch trees from different regions - theUrals, Krasnoyarsk, and Khakassia, respectively. Sequence reads were obtained using the Illumina HiSeq2000 in the Laboratory of Forest Genomics at the Genome Research and Education Center ofthe Siberian Federal University. The assembling was done using the Bowtie2 mapping program and the SPAdes genomic assembler. The genome annotation was performed using the RAST service. We used the GMATo program for the SSRs search, and the Bowtie2 and UGENE programs for the SNPs detection. Length of the assembled chloroplast genome was 122,561bp, which is similar to 122,474bp in the closely related European larch (Larix decidua Mill.). As a result of annotation and comparison of the data with theexisting data available only for three larch species - L. decidua, L. potaninii var. chinensis (complete genome 122,492bp), and L. occidentalis (partial genome of 119,680bp), we identified 110 genes, 34 of which represented tRNA, 4 rRNA, and 72 protein-coding genes. In total, 13 SNPs were detected; two of them were in the tRNA-Arg and Cell division protein FtsH genes, respectively. In addition, 23 SSR loci were identified.ConclusionsThe complete chloroplast genome sequence was obtained for Siberian larch for the first time. The reference complete chloroplast genomes, such as one described here, would greatly help in the chloroplast resequencing and search for additional genetic markers using population samples. The results of this research will be useful for further phylogenetic and gene flow studies in conifers.

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Siberian Fed Univ, Genome Res & Educ Ctr, Lab Forest Genom, Krasnoyarsk 660036, Russia.
Russian Acad Sci, VN Sukachev Inst Forest, Lab Forest Genet & Select, Siberian Branch, Krasnoyarsk 660036, Russia.
Georg August Univ Gottingen, Dept Forest Genet & Forest Tree Breeding, Busgenweg 2, D-37077 Gottingen, Germany.
Russian Acad Sci, Vavilov Inst Gen Genet, Lab Populat Genet, Moscow 119333, Russia.
Texas A&M Univ, Dept Ecosyst Sci & Management, College Stn, TX 77843 USA.

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Bondar, Eugeniya I.; Putintseva, Yuliya A.; Oreshkova, Nataliya V.; Krutovsky, Konstantin V.; Krutovsky, Konstantin; Government of the Russian Federation [14.Y26.31.0004]; University of Gottingen

    Formal Criteria for the Humus Status of Mountainous Peat Soils in Altitudinal Zones
/ T. T. Efremova [et al.] // Eurasian Soil Sci. - 2019. - Vol. 52, Is. 8. - P892-902, DOI 10.1134/S1064229319080076. - Cited References:46 . - ISSN 1064-2293. - ISSN 1556-195X
РУБ Soil Science
Рубрики:
ORGANIC-MATTER
   FOREST

Кл.слова (ненормированные):
mountainous peat soils -- organic matter -- diagnostics -- formalized -- classification -- multivariate statistical analysis

Аннотация: Cryogenic oligotrophic (Hyperdystric Cryic Fibric Histosols), oligomesotrophic (Dystric Fibric Histosols), mesoeutrophic (Oligeoeutric Fibric Histosols), and eutrophic (Hypereutric Fibric Histosols) peat soils were studied on the eastern slopes of the Kuznetsk Alatau Ridge (Republic of Khakassia). Their altitudinal differentiation was examined, and clustering according to the qualitative and quantitative composition of organic matter was performed. The most informative indicators of similarity and/or differences between the clusters were suggested. The group composition of organic matter was analyzed using acid and alkaline extractions. Multivariate statistical analyses (cluster, discriminant, and canonic) were applied for evaluation of the humus status. Indicators of organic matter status, which are significant for discrimination form two discriminant functions. Function 1 discriminates between the clusters (80%) and includes the indicators characterizing the depths of peat soil transformation: humification degree ( n-ary sumation HA + n-ary sumation FA), type of humus (C-HA/C-FA ratio), and ratio between the fractions of humic acids extracted by 0.02 N NaOH and 0.1 N NaOH (C-0.02 n NaOH/C-0.1 n NaOH). Function 1 clearly separates clusters of permafrost-affected oligotrophic peat soils of the alpine tundra zone (>1460 m a.s.l.) from oligo-mesotrophic peat soils of the subalpine zone (1087 m a.s.l.). Function 2 discriminates (at the 16% difference level) the clusters of peat soils of the forest zone-meso-eutrophic peat soils of the taiga zone (832 m a.s.l.) and eutrophic peat soils of the subtaiga-forest-steppe zone (622-573 m a.s.l.); it also includes hemicellulose and cellulose-characteristics of the initial state of peat-forming plants. The humus status of the mountainous peat soils corresponds to their diagnostics according to the base saturation and pH criteria and reflects a general pedogenetic trend in mountains: an increase in the humus content in soils with the altitude, which was earlier shown for mineral soils.

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Scopus

Держатели документа:
Russian Acad Sci, Sukachev Inst Forestry, Siberian Branch, Krasnoyarsk 660036, Russia.

Доп.точки доступа:
Efremova, T. T.; Efremov, S. P.; Melent'eva, N. V.; Avrova, A. F.
631.417.2;631.445.12
Е 92

    ФОРМАЛИЗОВАННЫЙ АНАЛИЗ ГУМУСНОГО СОСТОЯНИЯ ГОРНЫХ ТОРФЯНЫХ ПОЧВ НА УРОВНЕ ВЫСОТНЫХ ПОЯСОВ
[Текст] : статья / Т. Т. Ефремова, С. П. Ефремов, Н. В. Мелентьева, А. Ф. Аврова // Почвоведение. - 2019. - № 8. - С. 923-934, DOI 10.1134/S0032180X19080070 . - ISSN 0032-180X
   Перевод заглавия: Formal Criteria of the Humus Status of Mountainous Peat Soilsat the Level of Altitudinal Zones
УДК

Аннотация: Исследован качественный и количественный состав органического вещества горных торфяных почв криогенных олиготрофных (Hyperdystric Cryic Histosols), олиго-мезотрофных (Orthodystric Histosols), мезо-эутрофных (Oligeoeutric Histosols) и эутрофных (Hypereutric Histosols) восточного макросклона Кузнецкого Алатау (республика Хакасия). Изучена высотно-поясная дифференциация и выполнена объективная группировка (кластеризация) торфяных почв по гумусному состоянию, установлены наиболее информативные признаки сходства и/или различия кластеров. Проведены последовательный анализ группового состава органического вещества методом кислотной и щелочной экстракции, оценка по системе показателей гумусного состояния почв, многомерный статистический анализ (кластерный, дискриминантный, канонический). Значимые для дискриминации показатели состояния органического вещества формируют две дискриминантные функции. Первая обладает наибольшими дискриминирующими возможностями различать кластеры (80%) и включает показатели, которые характеризуют глубину преобразования торфяных почв: степень гумификации (∑ГК + ∑ФК), тип гумуса (отношение СГК/СФК), соотношение фракций гумусовых веществ (С0.02 н NaOH/C0.1 н NaOH). Функцией 1 дискриминируются кластеры торфяных почв высокогорья: мерзлотные олиготрофные альпийско-тундрового пояса (1460 м над ур. м.) и олиго-мезотрофные субальпийского пояса (1087 м). Вторая дискриминантная функция обеспечивает меньшую долю различия (16%) и включает показатели исходного состояния растений-торфообразователей: гемицеллюлозы и целлюлоза. Функцией 2 дискриминируются кластеры торфяных почв лесного пояса: мезоэутрофные горно-таежного пояса (832 м) и эутрофные подтаежно-лесостепного пояса (622–573 м над ур. м.). Гумусное состояние горных торфяных почв соответствует их диагностике по принципу насыщенности основаниями и величине рН, а также отражает общие признаки горного почвообразования – увеличение гумусированности с высотой, установленной ранее для почв минерального ряда
Cryogenic oligotrophic (Hyperdystric Cryic Fibric Histosols), oligo-mesotrophic (Dystric Fibric Histosols), meso-eutrophic (Oligeoeutric Fibric Histosols), and eutrophic (Hypereutric Fibric Histosols) peat soils on the eastern slopes of the Kuznetsk Alatau Ridge (Khakassia Republic) were studied. Their altitudinal differentiation was examined, and their clustering according to qualitative and quantitative composition of organic matter was performed. The most informative indicators of similarity and/or differences of the clusters were suggested. The group composition of organic matter was studied using acid and alkaline extractions. Multivariate statistical analyses (cluster, discriminant, and canonic) were applied for evaluation of the humus state of soils. Significant indicators of the organic matter status form two discriminant functions. Function 1 discriminates between the clusters (80%) and includes the following indicators: humification degree (∑HA + ∑FA), type of humus (Cha/Cfa ratio), and ratio between the fractions of humic acids extracted by 0.02 N and 0.1 N NaOH (С0.02N NaOH/C0.1N NaOH). Function 1 clearly separates permafrost-affected oligotrophic peat soils of the tundra zone (>1460 m a.s.l.) from oligo-mesotrophic peat soils of the subalpine zone (1087 m a.s.l.). Function 2 discriminates between the clusters of peat soils of the forest zone—meso-eutrophic peat soils of the taiga zone (832 m a.s.l.) and eutrophic peat soils of the subtaiga–forest-steppe zone (622–573 m a.s.l.) at the 16% difference level. The humus status of the mountainous peat soils corresponds to their diagnostics according to the base saturation and pH criteria and reflects a general tendency for an increase in the soil humus content at higher altitudes, which has earlier been shown the mineral soils

Статья в РИНЦ

Держатели документа:
ИЛ СО РАН : 660036, Красноярск, Академгородок, 50, стр. 28

Доп.точки доступа:
Ефремова, Тамара Тимофеевна; Ефремов, Станислав Петрович; Yefryemov S.P.; Мелентьева, Надежда Васильевна; Melent'yeva Nadezhda Vasil'yevna; Аврова, Ада Федоровна; Avrova Ada Fyedorovna; Efremova T.T.

    Novel Data on the Taxonomic Diversity, Distribution, and Host Plants of Leafmining Moths of the Family Gracillariidae (Lepidoptera) in Siberia, Based on DNA Barcoding
/ N. I. Kirichenko, P. Triberti, E. N. Akulov [et al.] // Entomol. Rev. - 2019. - Vol. 99, Is. 6. - P796-819, DOI 10.1134/S0013873819060083 . - ISSN 0013-8738

Аннотация: The Gracillariidae fauna of Siberia, the region that occupies almost half of the territory of the Russian Federation, remains poorly studied. During a DNA barcoding study of Gracillariidae in Siberia, based on analysis of larvae and pupae collected from their leaf mines on woody plants, we identified 41 species. Three gracillariids were identified only to genus: Caloptilia sp. (host plant Prunus padus), Parornix sp. (Malus sp.), and Phyllonorycter sp. (Crataegus sp.), representing poorly studied or undescribed species. Six species are reported here for the first time for Siberia: Callisto insperatella (from Novosibirsk and Tomsk provinces), Caloptilia alnivorella (Buryatia), Phyllonorycter ermani (Irkutsk Province), Ph. lantanella (Novosibirsk Province), Ph. pumilae (Omsk and Irkutsk provinces), and Ph. viciae (Krasnoyarsk Territory). Parornix pfaffenzelleri, found in Khakassia, is reported as a species new to Russia. Other 15 gracillariid species previously known from Siberia were recorded in new administrative regions. The invasive lime leafminer Phyllonorycter issikii was first documented in Tomsk Province and Krasnoyarsk Territory in 2017 and 2018, respectively. Seven new gracillariid-host plant associations were found: Parectopa ononidis on Lupinaster pentaphyllus, Sauterina hofmanniella on Lathyrus gmelinii, Caloptilia stigmatella on Salix kochiana, Callisto insperatella on Prunus virginiana, Parornix scoticella on Amelanchier sp., Phyllonorycter ermani on Alnus alnobetula subsp. fruticosa, and Phyllonorycter viciae on Vicia unijuga. The Gracillariidae fauna of Siberia has 51% similarity with that of European Russia and only 38% similarity with that of the Russian Far East. © 2019, Pleiades Publishing, Inc.

Scopus

Держатели документа:
Sukachev Institute of Forest, Krasnoyarsk, 660036, Russian Federation
Siberian Federal University, Krasnoyarsk, 660041, Russian Federation
INRA, UR0633 Zoologie Forestiere, Orleans, F-45075, France
Museo Civico di Storia Naturale, Verona, 37129, Italy
Russian Plant Quarantine Center, Krasnoyarsk Branch, Krasnoyarsk, 660075, Russian Federation
Federal Research Center of East Asian Terrestrial Biodiversity Far Eastern Branch of Russian Academy of Sciences, Vladivostok, 690022, Russian Federation
Far Eastern Federal University, Vladivostok, 690922, Russian Federation
Institut de Recherche sur la Biologie de l’Insecte, CNRS-Universite de Tours, UMR 7261, Tours, 37200, France

Доп.точки доступа:
Kirichenko, N. I.; Triberti, P.; Akulov, E. N.; Ponomarenko, M. G.; Lopez-Vaamonde, C.

    Investigating Wood Decaying Fungi Diversity in Central Siberia, Russia Using ITS Sequence Analysis and Interaction with Host Trees
/ J. H. Park, I. N. Pavlov, M. J. Kim [et al.] // Sustainability. - 2020. - Vol. 12, Is. 6. - Ст. 2535, DOI 10.3390/su12062535. - Cited References:60. - This research was funded by the project on Korea Basidiomycota Resources Center of the National Research Foundation (NRF) funded by the Korean government, grant number NRF2015M3A9B8029237. . - ISSN 2071-1050
РУБ Green & Sustainable Science & Technology + Environmental Sciences

Аннотация: Wood-decay fungi (WDF) play a significant role in recycling nutrients, using enzymatic and mechanical processes to degrade wood. Designated as a biodiversity hot spot, Central Siberia is a geographically important region for understanding the spatial distribution and the evolutionary processes shaping biodiversity. There have been several studies of WDF diversity in Central Siberia, but identification of species was based on morphological characteristics, lacking detailed descriptions and molecular data. Thus, the aim of this study was to identify WDF in Central Siberia, regarding the degradation of host trees based on both morphological and molecular analyses. We collected 106 WDF samples from Krasnoyarsk and the Republic of Khakassia in 2014 and 2017, and identified a total of 52 fungal species from six main host tree genera. In order to assess the host preference of the WDF, we examined previous literature, and data from this study. We confirmed a division in host preference of WDF between gymnosperms and angiosperms. DNA-based identification and host preference assessment of the WDF provide preliminary data on WDF diversity and their role in nutrient cycles in the ecosystem of Central Siberia. To fully understand WDF diversity in Central Siberia, continuous long-term surveys, including DNA sequence data, are needed.

WOS

Держатели документа:
Seoul Natl Univ, Sch Biol Sci, Seoul 08826, South Korea.
Seoul Natl Univ, Inst Microbiol, Seoul 08826, South Korea.
Russian Acad Sci, VN Sukachev Inst Forest, Siberian Branch, Lab Reforestat Mycol & Plant Pathol, Krasnoyarsk 660036, Russia.
Reshetnev Siberian State Univ Sci & Technol, Dept Chem Technol Wood & Biotechnol, Krasnoyarsk 660049, Russia.
Natl Inst Forest Sci, Forest Prod Dept, Wood Utilizat Div, Seoul 02455, South Korea.
Changwon Natl Univ, Dept Biol & Chem, Chang Won 51140, South Korea.
Lingnan Univ, Sci Unit, Tuen Mun, Peoples R China.

Доп.точки доступа:
Park, Ji-Hyun; Pavlov, Igor N.; Kim, Min-Ji; Park, Myung Soo; Oh, Seung-Yoon; Park, Ki Hyeong; Fong, Jonathan J.; Lim, Young Woon; Pavlov, Igor; project on Korea Basidiomycota Resources Center of the National Research Foundation (NRF) - Korean government [NRF2015M3A9B8029237]

    Investigating wood decaying fungi diversity in central Siberia, Russia using ITS sequence analysis and interaction with host trees
/ J.-H. Park, I. N. Pavlov, M.-J. Kim [et al.] // Sustainability. - 2020. - Vol. 12, Is. 6. - Ст. 2535, DOI 10.3390/su12062535 . - ISSN 2071-1050
Аннотация: Wood-decay fungi (WDF) play a significant role in recycling nutrients, using enzymatic and mechanical processes to degrade wood. Designated as a biodiversity hot spot, Central Siberia is a geographically important region for understanding the spatial distribution and the evolutionary processes shaping biodiversity. There have been several studies of WDF diversity in Central Siberia, but identification of species was based on morphological characteristics, lacking detailed descriptions and molecular data. Thus, the aim of this study was to identify WDF in Central Siberia, regarding the degradation of host trees based on both morphological and molecular analyses. We collected 106 WDF samples from Krasnoyarsk and the Republic of Khakassia in 2014 and 2017, and identified a total of 52 fungal species from six main host tree genera. In order to assess the host preference of the WDF, we examined previous literature, and data from this study. We confirmed a division in host preference of WDF between gymnosperms and angiosperms. DNA-based identification and host preference assessment of the WDF provide preliminary data on WDF diversity and their role in nutrient cycles in the ecosystem of Central Siberia. To fully understand WDF diversity in Central Siberia, continuous long-term surveys, including DNA sequence data, are needed. © 2020 by the authors. Licensee MDPI, Basel, Switzerland.

Scopus

Держатели документа:
School of Biological Sciences and Institute of Microbiology, Seoul National University, Seoul, 08826, South Korea
Laboratory of Reforestation, Mycology and Plant Pathology, V. N. Sukachev Institute of Forest, Siberian Branch of Russian Academy of Sciences, Krasnoyarsk, 660036, Russian Federation
Department of Chemical Technology ofWood and Biotechnology, Reshetnev Siberian State University of Science and Technology, Krasnoyarsk, 660049, Russian Federation
Wood Utilization Division, Forest Products Department, National Institute of Forest Science, Seoul, 02455, South Korea
Department of Biology and Chemistry, Changwon National University, Changwon, 51140, South Korea
Science Unit, Lingnan University, Tuen Mun, Hong Kong

Доп.точки доступа:
Park, J. -H.; Pavlov, I. N.; Kim, M. -J.; Park, M. S.; Oh, S. -Y.; Park, K. H.; Fong, J. J.; Lim, Y. W.

    История массовых размножений сибирского шелкопряда в восточных предгорьях Кузнецкого Алатау: дендрохронологическая реконструкция
/ Д. А. Демидко, А. А. Ефременко, Ю. Н. Баранчиков // Сибирский лесной журнал. - 2023. - № 1. - P98-110, DOI 10.15372/SJFS20230109 . - ISSN 2311-1410
ГРНТИ

Аннотация: Реконструирована история массовых размножений сибирского шелкопряда ( Dendrolimus sibiricus Tschetverikov, 1908) в лиственничниках лесостепи восточных предгорий Кузнецкого Алатау (запад Чулымо-Енисейской котловины, юг Восточной Сибири, Республика Хакасия). Вспышки массового размножения этого вида неоднократно охватывали леса от Урала до Дальнего Востока на площади более 1 млн га. Однако имеется недостаток продолжительных рядов наблюдений за изменениями численности популяций сибирского шелкопряда. Данные об истории нанесенной им дефолиации позволят хотя бы частично восполнить этот пробел. Для реконструкции нами был изучен радиальный прирост в шести лиственничных древостоях, в прошлом подвергавшихся массовым размножениям сибирского шелкопряда. С помощью алгоритма Outbreak в рядах радиального прироста обнаружены специфические признаки (резкие, глубокие и продолжительные спады прироста), указывающие на дефолиацию в прошлом. Всего в 1740-2017 гг. был обнаружен 31 такой период. Исследование частотных характеристик хронологии дефолиации показало, что после завершения Малого Ледникового периода интервал между дефолиациями постепенно снижался с 10-11 в конце XIX в. до 7 лет в 1930-х годах. С 1940-х годов этот интервал уменьшился до 4-6 лет, что мы связываем с антропогенным воздействием (массированные рубки и, видимо, участившиеся низовые пожары). Следствием этого стали фрагментация древостоев и периодическое уничтожение пожарами зимующих энтомофагов. В результате частота появления очагов сибирского шелкопряда в районе исследований возросла или за счет выхода его из-под контроля энтомофагов, или в результате образования системы существующих в разное время миграционных очагов в фрагментированных древостоях
The outbreaks history of the Siberian moth ( Dendrolimus sibiricus Tschetveraikov, 1908) in larch forests of the forest-steppe at the eastern foothills of the Kuznetsk Alatau mountains (West of the Chulym-Yenisei basin, South of Eastern Siberia, Republic of Khakassia) is reconstructed. Outbreaks of this species have repeatedly covered forests from the Urals to the Far East on an area of more than 1 million hectares. However, there is a lack of long series of observations of changes in the size of the Siberian moth populations. Data on the history of the defoliations caused by it will at least partially fill this gap. For reconstruction, we studied the radial growth in six larch stands, which in the past were subjected to intensive defoliation by the Siberian moth. Using the OUTBREAK algorithm, specific features (abrupt, deep, and prolonged declines in growth) were found in the series of radial growth, indicating defoliation in the past. In total 31 such periods were found in 1740-2017. A study of the frequency characteristics of the chronology of defoliation showed that after the end of the Little Ice Age, the interval between defoliations gradually decreased from 10-11 years at the end of the 19th century to 7 years in the 1930s. Since the 1940s, this interval has decreased to 4-6 years, which we attribute to anthropogenic impact (massive logging and, apparently, more frequent ground fires). The consequence of this was the fragmentation of forest stands and the periodic eliminations of overwintering entomophages by fires. As a result, the frequency of occurrence of the Siberian moth foci in the study area increased either due to its escape from the control of entomophages, or because of the formation of a system of migration foci that existed at different times in fragmented forest stands

РИНЦ

Держатели документа:
Sukachev Institute of Forest, Siberian Branch of the Russian Academy of Sciences, Krasnoyarsk, Russian Federation : 660036, Красноярск, Академгородок, 50, стр. 28

Доп.точки доступа:
Ефременко, Антон Андреевич; Баранчиков, Юрий Николаевич; Baranchikov, Yury Nikolayevich; Demidko D.A.