Труды сотрудников ИЛ им. В.Н. Сукачева СО РАН

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Найдено документов в текущей БД: 9

    Influence of Temperature on Fractional Composition of Proteins and Respiration of Germinating Seeds of Gmelin and Siberian Larch
[Text] / O. V. Masyagina, S. G. Prokushkin, M. Y. Sadilova // Contemp. Probl. Ecol. - 2009. - Vol. 2, Is. 6. - P611-619, DOI 10.1134/S1995425509060198. - Cited References: 30. - This work is partially supported with a grant from Krasnoyarsk Regional Scientific Fund and grant 08-04-00034 from the Russian Foundation for Basic Research, integrated project no. 76. . - 9. - ISSN 1995-4255
РУБ Ecology

Аннотация: The influence of optimal and contrasting temperatures on the fractional composition of proteins and respiration of germinating seeds of Gmelin larch (Larix gmelinii (Rupr.) Rupr.) and Siberian larch (Larix sibirica Ledeb.) was revealed. The dominance of globulins (salt-soluble fraction) and insoluble proteins was noted in viable air-dry seeds of larch. Optimal and contrasting temperatures of germination of seeds caused significant changes in the content and dynamics of separate fractions of protein, the contrasting temperatures causing greater changes: increasing in the content of insoluble proteins, intense consumption of globulins at separate stages of germination. Respiration of the seeds during germination at contrasting temperatures also increased more than at an optimal temperature. Thermal regime of germination affected the character of relations between the respiration rate and contents of different protein fractions.

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Держатели документа:
[Masyagina, O. V.
Prokushkin, S. G.
Sadilova, M. Yu.] Russian Acad Sci, Siberian Branch, VN Sukachev Inst Forest, Krasnoyarsk 660036, Russia

Доп.точки доступа:
Masyagina, O.V.; Prokushkin, S.G.; Sadilova, M.Y.; Krasnoyarsk Regional Scientific Fund; Russian Foundation for Basic Research [08-04-00034]

    Untangling metabolic and spatial interactions of stress tolerance in plants. 1. Patterns of carbon metabolism within leaves
[Text] / K. Y. Biel [et al.] // Protoplasma. - 2010. - Vol. 245, Is. 01.04.2013. - P49-73, DOI 10.1007/s00709-010-0135-7. - Cited References: 136. - Supported in part by the Competitive Research Grants Office, U.S. Department of Agriculture (Grant Nos. 96-35100-3167 and 98-35100-6106 to JNN). IRF and GNN were supported by Sr. Fulbright Scholar Awards. Thanks to Professors Andrew A. Benson (Scripps Institute of Oceanography, La Jolla, California, USA), Edwin A. Cossins (University of Alberta, Edmonton, Canada), and William H. Outlaw, Jr. (Florida State University, Tallahassee, Florida, USA) for the valuable comments on the manuscript, and to Vincent R. Franceschi (Electron Microscopy Center, Washington State University, Pullman, Washington, USA; deceased) for useful discussions about calcium oxalate. Portions of the work were preliminarily reported (Bil' et al. 2003a, b) . - 25. - ISSN 0033-183X
РУБ Plant Sciences + Cell Biology

Аннотация: The localization of the key photoreductive and oxidative processes and some stress-protective reactions within leaves of mesophytic C(3) plants were investigated. The role of light in determining the profile of Rubisco, glutamate oxaloacetate transaminase, catalase, fumarase, and cytochrome-c-oxidase across spinach leaves was examined by exposing leaves to illumination on either the adaxial or abaxial leaf surfaces. Oxygen evolution in fresh paradermal leaf sections and CO(2) gas exchange in whole leaves under adaxial or abaxial illumination was also examined. The results showed that the palisade mesophyll is responsible for the midday depression of photosynthesis in spinach leaves. The photosynthetic apparatus was more sensitive to the light environment than the respiratory apparatus. Additionally, examination of the paradermal leaf sections by optical microscopy allowed us to describe two new types of parenchyma in spinach-pirum mesophyll and pillow spongy mesophyll. A hypothesis that oxaloacetate may protect the upper leaf tissue from the destructive influence of active oxygen is presented. The application of mathematical modeling shows that the pattern of enzymatic distribution across leaves abides by the principle of maximal ecological utility. Light regulation of carbon metabolism across leaves is discussed.

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Держатели документа:
[Nishio, John N.] Calif State Univ Chico, Biocompatible Plant Res Inst, Coll Nat Sci, Chico, CA 95929 USA
[Biel, Karl Y.
Fomina, Irina R.
Nazarova, Galina N.] Russian Acad Sci, Inst Basic Biol Problems, Pushchino 142290, Moscow Region, Russia
[Biel, Karl Y.
Fomina, Irina R.] Biosphere Syst Int Fdn, Oro Valley, AZ 85755 USA
[Soukhovolsky, Vladislav G.
Khlebopros, Rem G.] Russian Acad Sci, Int Sci Ctr Organism Extreme States Res, Krasnoyarsk Sci Ctr, Siberian Branch, Krasnoyarsk 660036, Russia
[Soukhovolsky, Vladislav G.] Russian Acad Sci, Inst Forest, Siberian Branch, Krasnoyarsk 660036, Russia
[Khlebopros, Rem G.] Russian Acad Sci, Inst Biophys, Siberian Branch, Krasnoyarsk 660036, Russia

Доп.точки доступа:
Biel, K.Y.; Fomina, I.R.; Nazarova, G.N.; Soukhovolsky, V.G.; Khlebopros, R.G.; Nishio, J.N.

    Intermittent low temperatures constrain spring recovery of photosynthesis in boreal Scots pine forests
[Text] / I. . Ensminger [et al.] // Glob. Change Biol. - 2004. - Vol. 10, Is. 6. - P995-1008, DOI 10.1111/j.1365-2486.2004.00781.x. - Cited References: 57 . - 14. - ISSN 1354-1013
РУБ Biodiversity Conservation + Ecology + Environmental Sciences

Аннотация: During winter and early spring, evergreen boreal conifers are severely stressed because light energy cannot be used when photosynthesis is pre-empted by low ambient temperatures. To study photosynthetic performance dynamics in a severe boreal climate, seasonal changes in photosynthetic pigments, chloroplast proteins and photochemical efficiency were studied in a Scots pine forest near Zotino, Central Siberia. In winter, downregulation of photosynthesis involved loss of chlorophylls, a twofold increase in xanthophyll cycle pigments and sustained high levels of the light stress-induced zeaxanthin pigment. The highest levels of xanthophylls and zeaxanthin did not occur during the coldest winter period, but rather in April when light was increasing, indicating an increased capacity for thermal dissipation of excitation energy at that time. Concomitantly, in early spring the D1 protein of the photosystem II (PSII) reaction centre and the light-harvesting complex of PSII dropped to their lowest annual levels. In April and May, recovery of PSII activity, chloroplast protein synthesis and rearrangements of pigments were observed as air temperatures increased above 0degreesC. Nevertheless, severe intermittent low-temperature episodes during this period not only halted but actually reversed the physiological recovery. During these spring low-temperature episodes, protective processes involved a complementary function of the PsbS and early light-induced protein thylakoid proteins. Full recovery of photosynthesis did not occur until the end of May. Our results show that even after winter cold hardening, photosynthetic activity in evergreens responds opportunistically to environmental change throughout the cold season. Therefore, climate change effects potentially improve the sink capacity of boreal forests for atmospheric carbon. However, earlier photosynthesis in spring in response to warmer temperatures is strongly constrained by environmental variation, counteracting the positive effects of an early recovery process.

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Держатели документа:
Max Planck Inst Biogeochem, D-07701 Jena, Germany
Umea Univ, Dept Plant Physiol, S-90187 Umea, Sweden
Mt Allison Univ, Sackville, NB E4L 1G7, Canada
Umea Univ, Dept Biochem, S-90187 Umea, Sweden
Russian Acad Sci, Inst Forest, Siberian Branch, Krasnoyarsk 660036, Russia

Доп.точки доступа:
Ensminger, I...; Sveshnikov, D...; Campbell, D.A.; Funk, C...; Jansson, S...; Lloyd, J...; Shibistova, O...; Oquist, G...

    Nitrogen dynamics in Turbic Cryosols from Siberia and Greenland
/ B. Wild [et al.] // Soil Biology and Biochemistry. - 2013. - Vol. 67. - P85-93, DOI 10.1016/j.soilbio.2013.08.004 . - ISSN 0038-0717

Кл.слова (ненормированные):
Arctic -- Cryoturbation -- Ecological stoichiometry -- Nitrification -- Nitrogen availability -- Nitrogen mineralization -- Nitrogen transformation -- Protein depolymerization -- Soil organic matter -- Tundra -- Arctic -- Cryoturbation -- Ecological stoichiometry -- Nitrogen availability -- Nitrogen mineralization -- Nitrogen transformations -- Protein depolymerization -- Soil organic matters -- Tundra -- Amino acids -- Biogeochemistry -- Decay (organic) -- Depolymerization -- Mineralogy -- Nitrification -- Nitrogen -- Organic compounds -- Permafrost -- Proteins -- Soils -- arctic environment -- cryoturbation -- decomposition -- freezing -- microbial community -- mineralization -- nitrification -- nitrogen -- nitrogen cycle -- permafrost -- protein -- soil horizon -- soil organic matter -- stoichiometry -- subsoil -- thawing -- transformation -- tundra -- Arctic -- Greenland -- Siberia

Аннотация: Turbic Cryosols (permafrost soils characterized by cryoturbation, i.e., by mixing of soil layers due to freezing and thawing) are widespread across the Arctic, and contain large amounts of poorly decomposed organic material buried in the subsoil. This cryoturbated organic matter exhibits retarded decomposition compared to organic material in the topsoil. Since soil organic matter (SOM) decomposition is known to be tightly linked to N availability, we investigated N transformation rates in different soil horizons of three tundra sites in north-eastern Siberia and Greenland. We measured gross rates of protein depolymerization, N mineralization (ammonification) and nitrification, as well as microbial uptake of amino acids and NH4 + using an array of 15N pool dilution approaches. We found that all sites and horizons were characterized by low N availability, as indicated by low N mineralization compared to protein depolymerization rates (with gross N mineralization accounting on average for 14% of gross protein depolymerization). The proportion of organic N mineralized was significantly higher at the Greenland than at the Siberian sites, suggesting differences in N limitation. The proportion of organic N mineralized, however, did not differ significantly between soil horizons, pointing to a similar N demand of the microbial community of each horizon. In contrast, absolute N transformation rates were significantly lower in cryoturbated than in organic horizons, with cryoturbated horizons reaching not more than 32% of the transformation rates in organic horizons. Our results thus indicate a deceleration of the entire N cycle in cryoturbated soil horizons, especially strongly reduced rates of protein depolymerization (16% of organic horizons) which is considered the rate-limiting step in soil N cycling. В© 2013 The Authors.

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Держатели документа:
University of Vienna, Department of Microbiology and Ecosystem Science, Division of Terrestrial Ecosystem Research, Althanstrasse 14, 1090 Vienna, Austria
Austrian Polar Research Institute, 1090 Vienna, Austria
University of South Bohemia, Department of Ecosystems Biology, Branisovska 31, 37005 Ceske Budejovice, Czech Republic
Leibniz Universitat Hannover, Institut fur Bodenkunde, Herrenhauser Strasse 2, 30419 Hannover, Germany
International Institute for Applied Systems Analysis (IIASA), Schlossplatz 1, 2361 Laxenburg, Austria
Central Siberian Botanical Garden, Siberian Branch of Russian Academy of Sciences, St. Zolotodolinskaya 101, 630090 Novosibirsk, Russian Federation
VN Sukachev Institute of Forest, Siberian Branch of Russian Academy of Sciences, Akademgorodok, 660036 Krasnoyarsk, Russian Federation
University of Vienna, Department of Ecogenomics and Systems Biology, Althanstrasse 14, 1090 Vienna, Austria
University of Bergen, Department of Biology/Centre for Geobiology, Allegaten 41, 5007 Bergen, Norway
Northeast Scientific Station, Pacific Institute for Geography, Far-East Branch of Russian Academy of Sciences, 678830 Chersky, Republic of Sakha, Russian Federation

Доп.точки доступа:
Wild, B.; Schnecker, J.; Barta, J.; Capek, P.; Guggenberger, G.; Hofhansl, F.; Kaiser, C.; Lashchinsky, N.; Mikutta, R.; Mooshammer, M.; Santruckova, H.; Shibistova, O.; Urich, T.; Zimov, S.A.; Richter, A.

    LOCATION OF ARABINOGALACTAN PROTEINS IN XYLEM OF SIBERIAN LARCH
[Text] / G. F. ANTONOVA, V. V. STASOVA // SOVIET PLANT PHYSIOLOGY. - 1990. - Vol. 37, Is. 4. - P547-554. - Cited References: 23 . - 8. - ISSN 0038-5719
РУБ Plant Sciences

Аннотация: We conducted a comparative study on the composition of water soluble carbohydrate-protein complexes of primary cell walls and cytoplasm in xylem cells of Siberian larch (Larix sibirica Ldb.). Preparations were obtained in the process of isolating protoplasts from xylem cells at the stage of elongation. Water-soluble high-molecular-weight compounds were fractionated on DEAE cellulose. It was found that the dominant fraction in composition of these compounds consists of a carbohydrate-protein complex. Comparison of the composition of neutral sugars, uronic acids, and amino acids of these complexes showed that water-soluble arabinogalactan proteins were absent in the cytoplasm, but present in the solution after plasmolysis. They were bound with pectins and arabinoxylans, detected in solutions obtained after isolation and purification of protoplasts, and capable of forming a gel at low water content and low temperature. It is hypothesized that arabinogalactan proteins are components of primary cell walls, that they are located for the most part on the surface, and that their solubility in an aqueous medium depends upon binding with pectins of the middle plate and with other cell wall components.

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Доп.точки доступа:
ANTONOVA, G.F.; STASOVA, V.V.

    WATER-SOLUBLE ARABINOGALACTAN PROTEINS OF THE XYLEM OF THE SIBERIAN LARCH AT DIFFERENT STAGES OF TRACHEID ONTOGENESIS
[Text] / G. F. ANTONOVA, V. V. STASOVA, E. S. MALYUTINA // Biochem.-Moscow. - 1988. - Vol. 53, Is. 6. - P818-827. - Cited References: 25 . - 10. - ISSN 0006-2979
РУБ Biochemistry & Molecular Biology


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Доп.точки доступа:
ANTONOVA, G.F.; STASOVA, V.V.; MALYUTINA, E.S.

    Biochemical composition of vegetative explants and callus pinus sibirica du tour
/ Zh. A. Koh, Yu. A. Litovka, P. V. Makolova [и др.] // Khimiya Rastitel'nogo Syr'ya. - 2021. - Is. 4. - С. 395-403, DOI 10.14258/JCPRM.2020048530 . - ISSN 1029-5151
   Перевод заглавия: Биохимический состав вегетативных эксплантов и каллусов pinus sibirica du tour

Кл.слова (ненормированные):
Biochemical composition -- Callus -- Explants -- In vitro cultivation -- Pinus sibirica -- Sterilization -- Water-soluble proteins

Аннотация: The methods of sterilization of annual shoots Pinus sibirica Du Tour and the conditions for their introduction into in vitro culture were studied. Induction of callusogenesis of aseptically viable explants of P. sibirica proceeds more intensively on the modified Murasige-Skoog medium: hormonal supply of 0.4% kinetin and 0.25% 6-benzylaminopurine; reduced sucrose concentration of 1.5%. The frequency of callus formation was 83%. Close quantitative indicators of extractive substances were established (36 and 33% of absolutely dry weight for callus and explant, respectively); easily hydrolyzable polysaccharides (18 and 16%) and proteins (11 and 10%).Callus P. sibirica has a higher content of ascorbic acid, flavanoids, tocopherols and ash elements compared to explants and a low amount of hard-hydrolyzable polysaccharides, lipids, tannins, pigments, and essential oils.The electrophoretic spectrum of water-soluble callus proteins is represented by eleven fractions: 63% of the total water-soluble proteins are fractions with a molecular weight of 33 kD and above. Fractions with molecular weights of 50 and 62 kD (20 and 17%, respectively) are represented as much as possible.In the explants of P. sibirica, low molecular weight fractions of proteins with molecular masses of 5 kD and lower (59%) predominate. The amino acid composition of calli and explants of P. sibirica is identical and is represented by fifteen individual amino acids. Callus tissue has a higher content of glutamic acid and two hydrophobic amino acids (proline and isoleucine) compared to the vegetative part of the plant and low tyrosine content. © 2020 Altai State University. All rights reserved.

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Держатели документа:
Institute of Forest Named After V.N. Sukachev, SB, RAS, FRC, KSC, SB, RAS, Akademgorodok, 50/28, Krasnoyarsk, 660036, Russian Federation
Krasnoyarsk State Agrarian University, pr. Mira, 90, Krasnoyarsk, 660049, Russian Federation
Siberian State University of Science and Technology Named After Academician M.F. Reshetneva, pr. Mira, 82, Krasnoyarsk, 660049, Russian Federation

Доп.точки доступа:
Koh, Zh. A.; Litovka, Yu. A.; Makolova, P. V.; Shabanova, K. A.; Pavlov, I. N.

    Short- and long-term effects of surface fires on heat stress protein content in Scots pine needles
/ N. E. Korotaeva, I. G. Gette, N. V. Pacharkova [et al.] // Int. J. Wildland Fire. - 2021, DOI 10.1071/WF20084. - Cited References:51. - This research was supported by the Russian Foundation for Basic Research, Government of Krasnoyarsk Krai, Krasnoyarsk Regional Science Fund, research project No. 18-44-243007. . - Article in press. - ISSN 1049-8001. - ISSN 1448-5516
РУБ Forestry

Аннотация: Plants can minimise the damaging effects of high temperatures through numerous protective mechanisms; however, it is largely unknown how these mechanisms respond to extreme temperatures associated with wildfire. We investigated the effect of experimental burning (EB) on the accumulation of stress heat shock proteins (Hsps), which are one of the factors of thermotolerance in plants, in the needles of Scots pine (Pinus sylvestris L.). Previous fire exposure led not only to short- and long-term changes in the content of stress proteins in needles but also to changes in the accumulation of these proteins in response to reheating. The content of Hsp 101, Hsp 70 and Hsp 17.6 in the needles increased on the second day after EB (short-term effect of fire). Three years after EB, the content of Hsps in the fire-exposed needles was lower compared with the control needles. When these needles were subjected to the heat stress test at 45 degrees C, the content of Hsps increased, whereas the content of Hsps in control needles decreased. Our results suggest that Scots pine needles retain a fairly long-term 'stress memory', expressed through proteomic defence mechanisms, to wildfire heat-induced damage.

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Держатели документа:
Russian Acad Sci, Siberian Inst Plant Physiol & Biochem, Siberian Branch, Irkutsk Sci Ctr, RU-664033 Irkutsk, Russia.
Siberian Fed Univ, RU-660041 Krasnoyarsk, Russia.
Russian Acad Sci, Sukachev Inst Forest, Siberian Branch, Krasnoyarsk Sci Ctr, RU-660036 Krasnoyarsk, Russia.

Доп.точки доступа:
Korotaeva, N. E.; Gette, I. G.; Pacharkova, N. V.; Kosov, I. V.; Borovskii, G. B.; Russian Foundation for Basic Research, Government of Krasnoyarsk Krai; Krasnoyarsk Regional Science Fund [18-44-243007]

    ГЕНЕТИЧЕСКАЯ СТРУКТУРА И ГЕОГРАФИЧЕСКАЯ ДИФФЕРЕНЦИАЦИЯ ПОПУЛЯЦИЙ ЛИСТВЕННИЦЫ СИБИРСКОЙ (LARIX SIBIRICA LEDEB.) НА ОСНОВЕ ГЕНОТИПИРОВАНИЯ ГЕНОМА ПУТЕМ СЕКВЕНИРОВАНИЯ
[Текст] : научное издание / С. В. Новикова, Н. В. Орешкова, В. В. Шаров, В. Л. Семериков, К. В. Крутовский // Сибирский экологический журнал. - 2023. - Т. 30, № 5. - С. 675-691, DOI 10.15372/SEJ20230509 . - ISSN 0869-8619
   Перевод заглавия: GENETIC STRUCTURE AND GEOGRAPHICAL DIFFERENTIATION OF SIBERIAN LARCH (LARIX SIBIRICA LEDEB.) POPULATIONS BASED ON GENOME GENOTYPING BY SEQUENCING
ГРНТИ

Аннотация: Приведены результаты исследования генетической дифференциации популяций лиственницы сибирской (Larix sibirica Ledeb.) в широтном градиенте климатических условий, полученные на основе генотипирования генома с помощью высокопроизводительного секвенирования геномных районов ДНК, ассоциированных с сайтами рестрикции (ddRADseq). Изучена также корреляция пяти основных климатических переменных с изменчивостью 47 929 генетических маркеров - однонуклеотидных полиморфизмов или “снипов” (от английского SNPs - single nucleotide polymorphisms). Всего изучено 125 деревьев: 61 дерево в четырех популяциях вдоль западной географической трансекты и 64 дерева в четырех популяциях вдоль восточной географической трансекты. Выявлен 21 SNPs с признаками отбора, включая 9 SNPs аутлайеров, чья изменчивость не может быть объяснена селективно-нейтральными процессами, и 12 SNPs, чья изменчивость коррелировала с изменчивостью некоторых климатических факторов. Семь SNPs расположены в интронах митохондриальных генов, три расположены вблизи митохондриальных генов, кодирующих NAD2 и рибосомальные белки S7 и S11, один на отдалении от ядерного гена, кодирующего белок, гомологичный связанному с микротрубочками futsch-подобному белку Arabidopsis thaliana, два в белковых генах неизвестной природы и три в контигах, не содержащих гены, и для которых не найдены гомологичные последовательности в NCBI GenBank.
The genetic differentiation of Siberian larch (Larix sibirica Ledeb.) populations in the latitudinal gradient of climatic conditions was studied based on high-throughput double digest restriction-site associated DNA sequencing (ddRADseq) data. We studied the correlation of five main climatic variables with the variability of 47,929 single nucleotide polymorphisms (SNPs). A total of 125 trees were studied: 61 trees in four populations along the western geographic transect and 64 trees in four populations along the eastern geographic transect. 21 SNPs with signatures of selection were identified, including 9 outlier SNPs whose variability cannot be explained by selectively neutral processes, and 12 SNPs whose variability correlated with the environmental factors. Seven SNPs are located in the introns of mitochondrial genes, three are located relatively close to the mitochondrial genes encoding NAD2 and ribosomal proteins S7 and S11, one is located at a distance from the nuclear gene encoding a protein homologous to the microtubule-associated futsch-like protein of Arabidopsis thaliana, two in the protein genes of an unknown nature and three in contigs containing no genes, and for which no homologous sequences were found in the NCBI GenBank.

РИНЦ

Держатели документа:
ИЛ СО РАН : 660036, Красноярск, Академгородок, 50, стр. 28

Доп.точки доступа:
Орешкова, Наталья Викторовна; Шаров, В.В.; Семериков, В.Л.; Semerikov V.L.; Крутовский, Константин Валерьевич; Krutovsky, Konstantin V.