/ Z. Zhu [et al.] // Biogeosciences. - 2016. - Vol. 13, Is. 15. - P4481-4489, DOI 10.5194/bg-13-4481-2016
. - ISSN 1726-4170
Аннотация: The input of recently photosynthesized C has significant implications on soil organic C sequestration, and in paddy soils, both plants and soil microbes contribute to the overall C input. In the present study, we investigated the fate and priming effect of organic C from different sources by conducting a 300-day incubation study with four different 13C-labelled substrates: rice shoots (shoot-C), rice roots (root-C), rice rhizodeposits (rhizo-C), and microbe-assimilated C (micro-C). The efflux of both 13CO2 and 13CH4 indicated that the mineralization of C in shoot-C-, root-C-, rhizo-C-, and micro-C-treated soils rapidly increased at the beginning of the incubation and decreased gradually afterwards. The highest cumulative C mineralization was observed in root-C-treated soil (45.4%), followed by shoot-C- (31.9%), rhizo-C- (7.90%), and micro-C-treated (7.70%) soils, which corresponded with mean residence times of 39.5, 50.3, 66.2, and 195 days, respectively. Shoot and root addition increased C emission from native soil organic carbon (SOC), up to 11.4 and 2.3 times higher than that of the control soil by day 20, and decreased thereafter. Throughout the incubation period, the priming effect of shoot-C on CO2 and CH4 emission was strongly positive; however, root-C did not exhibit a significant positive priming effect. Although the total C contents of rhizo-C-(1.89%) and micro-C-treated soils (1.90%) were higher than those of untreated soil (1.81%), no significant differences in cumulative C emissions were observed. Given that about 0.3 and 0.1% of the cumulative C emission were derived from labelled rhizo-C and micro-C, we concluded that the soil organic C-derived emissions were lower in rhizo-C- and micro-C-treated soils than in untreated soil. This indicates that rhizodeposits and microbe-assimilated C could be used to reduce the mineralization of native SOC and to effectively improve soil C sequestration. The contrasting behaviour of the different photosynthesized C substrates suggests that recycling rice roots in paddies is more beneficial than recycling shoots and demonstrates the importance of increasing rhizodeposits and microbe-assimilated C in paddy soils via nutrient management. © 2016 Author(s).
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Держатели документа:
Key Laboratory of Agro-ecological Processes in Subtropical Region, Institute of Subtropical Agriculture, Chinese Academy of Sciences, Hunan, China
Changsha Research Station for Agricultural and Environmental Monitoring, Institute of Subtropical Agriculture, Chinese Academy of Sciences, Hunan, China
Institute of Soil Science, Leibniz Universitat Hannover, Hannover, Germany
VN Sukachev Institute of Forest, Siberian Branch, Russian Academy of Science, Krasnoyarsk, Russian Federation
College of Resources and Environment, Southwest University, Chongqing, China
Доп.точки доступа:
Zhu, Z.; Zeng, G.; Ge, T.; Hu, Y.; Tong, C.; Shibistova, O.; He, X.; Wang, J.; Guggenberger, G.; Wu, J.
Труды сотрудников ИЛ им. В.Н. Сукачева СО РАН
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Fate of rice shoot and root residues, rhizodeposits, and microbe-assimilated carbon in paddy soil - Part 1: Decomposition and priming effect
Fate of carbohydrates and lignin in north-east Siberian permafrost soils
/ T. T. Dao [et al.] // Soil Biol. Biochem. - 2018. - Vol. 116. - P311-322, DOI 10.1016/j.soilbio.2017.10.032
. - ISSN 0038-0717
Кл.слова (ненормированные):
Carbohydrates -- Lignin -- Permafrost -- Soil biomarker -- Soil fraction -- Carbohydrates -- Carbon -- Copper compounds -- Lignin -- Organic carbon -- Oxygen supply -- Phenols -- Soils -- Sugars -- Environmental conditions -- Lignin-derived phenol -- Oxidative decomposition -- Permafrost degradation -- Soil density fractions -- Soil fractions -- Soil organic matters -- Total neutral sugars -- Permafrost -- active layer -- biomarker -- carbohydrate -- decomposition -- environmental fate -- lignin -- oxidation -- permafrost -- soil chemistry -- soil depth -- soil organic matter -- soil type -- transformation -- tundra soil -- Arctic -- Siberia
Аннотация: Permafrost soils preserve huge amounts of organic carbon (OC) prone to decomposition under changing climatic conditions. However, knowledge on the composition of soil organic matter (OM) and its transformation and vulnerability to decomposition in these soils is scarce. We determined neutral sugars and lignin-derived phenols, released by trifluoroacetic acid (TFA) and CuO oxidation, respectively, within plants and soil density fractions from the active layer and the upper permafrost layer at three different tundra types (shrubby grass, shrubby tussock, shrubby lichen) in the Northeast Siberian Arctic. The heavy fraction (HF; >1.6 g mL?1) was characterized by a larger enrichment of microbial sugars (hexoses vs. pentoses) and more pronounced lignin degradation (acids vs. aldehydes) as compared to the light fraction (LF; <1.6 g mL?1), showing the transformation from plant residue-dominated particulate OM to a largely microbial imprint in mineral-associated OM. In contrast to temperate and tropical soils, total neutral sugar contents and galactose plus mannose to arabinose plus xylose ratios (GM/AX) decreased in the HF with soil depth, which may indicate a process of effective recycling of microbial biomass rather than utilizing old plant materials. At the same time, lignin-derived phenols increased and the degree of oxidative decomposition of lignin decreased with soil depth, suggesting a selective preservation of lignin presumably due to anaerobiosis. As large parts of the plant-derived pentoses are incorporated in lignocelluloses and thereby protected against rapid decomposition, this might also explain the relative enrichment of pentoses with soil depth. Hence, our results show a relatively large contribution of plant-derived OM, particularly in the buried topsoil and subsoil, which is stabilized by the current soil environmental conditions but may become available to decomposers if permafrost degradation promotes soil drainage and improves the soil oxygen supply. © 2017
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Держатели документа:
Institute of Soil Science, Leibniz University Hannover, Germany
Soil Science and Soil Protection, Martin Luther University Halle-Wittenberg, Germany
VN Sukachev Institute of Forest, Krasnoyarsk, Russian Federation
Department of Microbiology and Ecosystem Science, University of Vienna, Vienna, Austria
Austrian Polar Research Institute, Vienna, Austria
Department of Environmental Science and Analytical Chemistry, Stockholm University, Stockholm, Sweden
Department of Natural Resources and the Environment, University of New Hampshire, Durham, NH, United States
Department of Ecosystem Biology, University of South Bohemia, Ceske Budejovice, Czech Republic
Department of Biology, Centre for Geobiology, University of Bergen, Bergen, Norway
Department of Bioscience, Center for Geomicrobiology, Aarhus, Denmark
Central Siberian Botanical Garden, Siberian Branch of Russian Academy of Sciences, Novosibirsk, Russian Federation
Department of Ecogenomics and Systems Biology, University of Vienna, Vienna, Austria
Institute of Microbiology, Ernst-Moritz-Arndt University, Greifswald, Germany
Доп.точки доступа:
Dao, T. T.; Gentsch, N.; Mikutta, R.; Sauheitl, L.; Shibistova, O.; Wild, B.; Schnecker, J.; Barta, J.; Capek, P.; Gittel, A.; Lashchinskiy, N.; Urich, T.; Santruckova, H.; Richter, A.; Guggenberger, G.
Кл.слова (ненормированные):
Carbohydrates -- Lignin -- Permafrost -- Soil biomarker -- Soil fraction -- Carbohydrates -- Carbon -- Copper compounds -- Lignin -- Organic carbon -- Oxygen supply -- Phenols -- Soils -- Sugars -- Environmental conditions -- Lignin-derived phenol -- Oxidative decomposition -- Permafrost degradation -- Soil density fractions -- Soil fractions -- Soil organic matters -- Total neutral sugars -- Permafrost -- active layer -- biomarker -- carbohydrate -- decomposition -- environmental fate -- lignin -- oxidation -- permafrost -- soil chemistry -- soil depth -- soil organic matter -- soil type -- transformation -- tundra soil -- Arctic -- Siberia
Аннотация: Permafrost soils preserve huge amounts of organic carbon (OC) prone to decomposition under changing climatic conditions. However, knowledge on the composition of soil organic matter (OM) and its transformation and vulnerability to decomposition in these soils is scarce. We determined neutral sugars and lignin-derived phenols, released by trifluoroacetic acid (TFA) and CuO oxidation, respectively, within plants and soil density fractions from the active layer and the upper permafrost layer at three different tundra types (shrubby grass, shrubby tussock, shrubby lichen) in the Northeast Siberian Arctic. The heavy fraction (HF; >1.6 g mL?1) was characterized by a larger enrichment of microbial sugars (hexoses vs. pentoses) and more pronounced lignin degradation (acids vs. aldehydes) as compared to the light fraction (LF; <1.6 g mL?1), showing the transformation from plant residue-dominated particulate OM to a largely microbial imprint in mineral-associated OM. In contrast to temperate and tropical soils, total neutral sugar contents and galactose plus mannose to arabinose plus xylose ratios (GM/AX) decreased in the HF with soil depth, which may indicate a process of effective recycling of microbial biomass rather than utilizing old plant materials. At the same time, lignin-derived phenols increased and the degree of oxidative decomposition of lignin decreased with soil depth, suggesting a selective preservation of lignin presumably due to anaerobiosis. As large parts of the plant-derived pentoses are incorporated in lignocelluloses and thereby protected against rapid decomposition, this might also explain the relative enrichment of pentoses with soil depth. Hence, our results show a relatively large contribution of plant-derived OM, particularly in the buried topsoil and subsoil, which is stabilized by the current soil environmental conditions but may become available to decomposers if permafrost degradation promotes soil drainage and improves the soil oxygen supply. © 2017
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Держатели документа:
Institute of Soil Science, Leibniz University Hannover, Germany
Soil Science and Soil Protection, Martin Luther University Halle-Wittenberg, Germany
VN Sukachev Institute of Forest, Krasnoyarsk, Russian Federation
Department of Microbiology and Ecosystem Science, University of Vienna, Vienna, Austria
Austrian Polar Research Institute, Vienna, Austria
Department of Environmental Science and Analytical Chemistry, Stockholm University, Stockholm, Sweden
Department of Natural Resources and the Environment, University of New Hampshire, Durham, NH, United States
Department of Ecosystem Biology, University of South Bohemia, Ceske Budejovice, Czech Republic
Department of Biology, Centre for Geobiology, University of Bergen, Bergen, Norway
Department of Bioscience, Center for Geomicrobiology, Aarhus, Denmark
Central Siberian Botanical Garden, Siberian Branch of Russian Academy of Sciences, Novosibirsk, Russian Federation
Department of Ecogenomics and Systems Biology, University of Vienna, Vienna, Austria
Institute of Microbiology, Ernst-Moritz-Arndt University, Greifswald, Germany
Доп.точки доступа:
Dao, T. T.; Gentsch, N.; Mikutta, R.; Sauheitl, L.; Shibistova, O.; Wild, B.; Schnecker, J.; Barta, J.; Capek, P.; Gittel, A.; Lashchinskiy, N.; Urich, T.; Santruckova, H.; Richter, A.; Guggenberger, G.
Carbon and nitrogen recycling from microbial necromass to cope with C:N stoichiometric imbalance by priming
/ J. Cui, Z. Zhu, X. Xu [et al.] // Soil Biol. Biochem. - 2020. - Vol. 142. - Ст. 107720, DOI 10.1016/j.soilbio.2020.107720
. - ISSN 0038-0717
Кл.слова (ненормированные):
Compound-specific 13C-PLFA analysis -- Glucose mineralization -- Necromass recycling -- Priming effects -- Soil carbon -- Stoichiometric imbalance -- Carbon dioxide -- Glucose -- Mineralogy -- Nitrogen -- Recycling -- Soils -- Compound-specific. 3C-PLFA analysis -- Necromass -- Priming effects -- Soil carbon -- Stoichiometric imbalance -- Bacteria -- anoxic conditions -- biomineralization -- carbon isotope -- decomposition -- glucose -- nitrogen -- nutrient cycling -- soil carbon -- soil nitrogen -- soil organic matter -- stoichiometry -- Actinobacteria (class) -- Bacteria (microorganisms) -- Fungi -- Negibacteria -- Posibacteria
Аннотация: The impact of increasing amounts of labile C input on priming effects (PE) on soil organic matter (SOM) mineralization remains unclear, particularly under anoxic conditions and under high C input common in microbial hotspots. PE and their mechanisms were investigated by a 60-day incubation of three flooded paddy soils amended with13C-labeled glucose equivalent to 50–500% of microbial biomass C (MBC). PE (14–55% of unamended soil) peaked at moderate glucose addition rates (i.e., 50–300% of MBC). Glucose addition above 300% of MBC suppressed SOM mineralization but intensified microbial N acquisition, which contradicted the common PE mechanism of accelerating SOM decomposition for N-supply (frequently termed as “N mining”). Particularly at glucose input rate higher than 3 g kg?1 (i.e., 300–500% of MBC), mineral N content dropped on day 2 close to zero (1.1–2.5 mg N kg?1) because of microbial N immobilization. To cope with the N limitation, microorganisms greatly increased N-acetyl glucosaminidase and leucine aminopeptidase activities, while SOM decomposition decreased. Several discrete peaks of glucose-derived CO2 (contributing >80% to total CO2) were observed between days 13–30 under high glucose input (300–500% of MBC), concurrently with CH4 peaks. Such CO2 dynamics was distinct from the common exponential decay pattern, implicating the recycling and mineralization of 13C-enriched microbial necromass driven by glucose addition. Therefore, N recycling from necromass was hypothesized as a major mechanism to alleviate microbial N deficiency without SOM priming under excess labile C input. Compound-specific 13C-PLFA confirmed the redistribution of glucose-derived C among microbial groups, i.e., necromass recycling. Following glucose input, more than 4/5 of total 13C-PLFA was in the gram-negative and some non-specific bacteria, suggesting these microorganisms as r-strategists capable of rapidly utilizing the most labile C. However, their 13C-PLFA content decreased by 70% after 60 days, probably as a result of death of these r-strategists. On the contrary, the 13C-PLFA in gram-positive bacteria, actinomycetes and fungi (K-strategists) was initially minimal but increased by 0.5–5 folds between days 2 and 60. Consequently, the necromass of dead r-strategists provided a high-quality C–N source to the K-strategists. We conclude that under severe C excess, N recycling from necromass is a much more efficient microbial strategy to cover the acute N demand than N acquisition from the recalcitrant SOM. © 2020 Elsevier Ltd
Scopus
Держатели документа:
Key Laboratory of Agro-ecological Processes in Subtropical Region & Changsha Research Station for Agricultural and Environmental Monitoring, Institute of Subtropical Agriculture, Chinese Academy of Sciences, Hunan, 410125, China
State Key Laboratory of Organic Geochemistry, Guangzhou Institute of Geochemistry, Chinese Academy of Sciences, Gongdong, 510640, China
Jiangsu Provincial Key Laboratory for Bioresources of Coastal Saline Soils, Jiangsu Coastal Biological Agriculture Synthetic Innovation Center, Yancheng Teachers' University, Yancheng, 224002, China
Key Laboratory of Ecosystem Network Observation and Modeling, Institute of Geographic Sciences and Natural Resources Research, Chinese Academy of Sciences, Beijing, 100101, China
School of Environment, Natural Resources & Geography, Bangor University, Gwynedd, LL57 2UW, United Kingdom
Department of Agricultural Soil Science, Department of Soil Science of Temperate Ecosystems, University of G?ttingen, G?ttingen, Germany
Institute of Environmental Sciences, Kazan Federal University, Kazan, 420049, Russian Federation
Agro-Technological Institute, RUDN University, Moscow, 117198, Russian Federation
Departamento de Ciencias Quimicas y Recursos Naturales, Universidad de La Frontera, Temuco, Chile
VN Sukachev Institute of Forest, SB-RAS, Krasnoyarsk, 660036, Russian Federation
Доп.точки доступа:
Cui, J.; Zhu, Z.; Xu, X.; Liu, S.; Jones, D. L.; Kuzyakov, Y.; Shibistova, O.; Wu, J.; Ge, T.
Кл.слова (ненормированные):
Compound-specific 13C-PLFA analysis -- Glucose mineralization -- Necromass recycling -- Priming effects -- Soil carbon -- Stoichiometric imbalance -- Carbon dioxide -- Glucose -- Mineralogy -- Nitrogen -- Recycling -- Soils -- Compound-specific. 3C-PLFA analysis -- Necromass -- Priming effects -- Soil carbon -- Stoichiometric imbalance -- Bacteria -- anoxic conditions -- biomineralization -- carbon isotope -- decomposition -- glucose -- nitrogen -- nutrient cycling -- soil carbon -- soil nitrogen -- soil organic matter -- stoichiometry -- Actinobacteria (class) -- Bacteria (microorganisms) -- Fungi -- Negibacteria -- Posibacteria
Аннотация: The impact of increasing amounts of labile C input on priming effects (PE) on soil organic matter (SOM) mineralization remains unclear, particularly under anoxic conditions and under high C input common in microbial hotspots. PE and their mechanisms were investigated by a 60-day incubation of three flooded paddy soils amended with13C-labeled glucose equivalent to 50–500% of microbial biomass C (MBC). PE (14–55% of unamended soil) peaked at moderate glucose addition rates (i.e., 50–300% of MBC). Glucose addition above 300% of MBC suppressed SOM mineralization but intensified microbial N acquisition, which contradicted the common PE mechanism of accelerating SOM decomposition for N-supply (frequently termed as “N mining”). Particularly at glucose input rate higher than 3 g kg?1 (i.e., 300–500% of MBC), mineral N content dropped on day 2 close to zero (1.1–2.5 mg N kg?1) because of microbial N immobilization. To cope with the N limitation, microorganisms greatly increased N-acetyl glucosaminidase and leucine aminopeptidase activities, while SOM decomposition decreased. Several discrete peaks of glucose-derived CO2 (contributing >80% to total CO2) were observed between days 13–30 under high glucose input (300–500% of MBC), concurrently with CH4 peaks. Such CO2 dynamics was distinct from the common exponential decay pattern, implicating the recycling and mineralization of 13C-enriched microbial necromass driven by glucose addition. Therefore, N recycling from necromass was hypothesized as a major mechanism to alleviate microbial N deficiency without SOM priming under excess labile C input. Compound-specific 13C-PLFA confirmed the redistribution of glucose-derived C among microbial groups, i.e., necromass recycling. Following glucose input, more than 4/5 of total 13C-PLFA was in the gram-negative and some non-specific bacteria, suggesting these microorganisms as r-strategists capable of rapidly utilizing the most labile C. However, their 13C-PLFA content decreased by 70% after 60 days, probably as a result of death of these r-strategists. On the contrary, the 13C-PLFA in gram-positive bacteria, actinomycetes and fungi (K-strategists) was initially minimal but increased by 0.5–5 folds between days 2 and 60. Consequently, the necromass of dead r-strategists provided a high-quality C–N source to the K-strategists. We conclude that under severe C excess, N recycling from necromass is a much more efficient microbial strategy to cover the acute N demand than N acquisition from the recalcitrant SOM. © 2020 Elsevier Ltd
Scopus
Держатели документа:
Key Laboratory of Agro-ecological Processes in Subtropical Region & Changsha Research Station for Agricultural and Environmental Monitoring, Institute of Subtropical Agriculture, Chinese Academy of Sciences, Hunan, 410125, China
State Key Laboratory of Organic Geochemistry, Guangzhou Institute of Geochemistry, Chinese Academy of Sciences, Gongdong, 510640, China
Jiangsu Provincial Key Laboratory for Bioresources of Coastal Saline Soils, Jiangsu Coastal Biological Agriculture Synthetic Innovation Center, Yancheng Teachers' University, Yancheng, 224002, China
Key Laboratory of Ecosystem Network Observation and Modeling, Institute of Geographic Sciences and Natural Resources Research, Chinese Academy of Sciences, Beijing, 100101, China
School of Environment, Natural Resources & Geography, Bangor University, Gwynedd, LL57 2UW, United Kingdom
Department of Agricultural Soil Science, Department of Soil Science of Temperate Ecosystems, University of G?ttingen, G?ttingen, Germany
Institute of Environmental Sciences, Kazan Federal University, Kazan, 420049, Russian Federation
Agro-Technological Institute, RUDN University, Moscow, 117198, Russian Federation
Departamento de Ciencias Quimicas y Recursos Naturales, Universidad de La Frontera, Temuco, Chile
VN Sukachev Institute of Forest, SB-RAS, Krasnoyarsk, 660036, Russian Federation
Доп.точки доступа:
Cui, J.; Zhu, Z.; Xu, X.; Liu, S.; Jones, D. L.; Kuzyakov, Y.; Shibistova, O.; Wu, J.; Ge, T.
Carbon and nitrogen recycling from microbial necromass to cope with C:N stoichiometric imbalance by priming
/ J. Cui, Z. K. Zhu, X. L. Xu [et al.] // Soil Biol. Biochem. - 2020. - Vol. 142. - Ст. 107720, DOI 10.1016/j.soilbio.2020.107720. - Cited References:80. - The study was supported by the National Key Research and Development Program of China (2017YFD0800104), the National Natural Science Foundation of China (41430860, 41771337, 41977093 and 31872695), State Key Laboratory of Organic Geochemistry, GIGCAS (SKLOG-201728), Hunan Province Base for Scientific and Technological Innovation Cooperation (2018WK4012), the Youth Innovation Team Project of Institute of Subtropical Agriculture, Chinese Academy of Sciences (2017QNCXTD_GTD), NSFC-RFBR joint project (N 19-54-53026) and Innovation Groups of National Natural Science Foundation of Hunan Province (2019JJ10003). We thank the Public Service Technology Center, Institute of Subtropical Agriculture, Chinese Academy of Sciences for technical assistance. The publication was supported by the Government Program of Competitive Growth of Kazan Federal University and with the support of the "RUDN University program 5-100."
. - ISSN 0038-0717
РУБ Soil Science
Аннотация: The impact of increasing amounts of labile C input on priming effects (PE) on soil organic matter (SOM) mineralization remains unclear, particularly under anoxic conditions and under high C input common in microbial hotspots. PE and their mechanisms were investigated by a 60-day incubation of three flooded paddy soils amended with(13)C-labeled glucose equivalent to 50-500% of microbial biomass C (MBC). PE (14-55% of unamended soil) peaked at moderate glucose addition rates (i.e., 50-300% of MBC). Glucose addition above 300% of MBC suppressed SOM mineralization but intensified microbial N acquisition, which contradicted the common PE mechanism of accelerating SOM decomposition for N-supply (frequently termed as "N mining"). Particularly at glucose input rate higher than 3 g kg(-1) (i.e., 300-500% of MBC), mineral N content dropped on day 2 close to zero (1.1-2.5 mg N kg(-1)) because of microbial N immobilization. To cope with the N limitation, microorganisms greatly increased N-acetyl glucosaminidase and leucine aminopeptidase activities, while SOM decomposition decreased. Several discrete peaks of glucose-derived CO2 (contributing >80% to total CO2) were observed between days 13-30 under high glucose input (300-500% of MBC), concurrently with CH4 peaks. Such CO2 dynamics was distinct from the common exponential decay pattern, implicating the recycling and mineralization of C-13-enriched microbial necromass driven by glucose addition. Therefore, N recycling from necromass was hypothesized as a major mechanism to alleviate microbial N deficiency without SOM priming under excess labile C input. Compound-specific C-13-PLFA confirmed the redistribution of glucose-derived C among microbial groups, i.e., necromass recycling. Following glucose input, more than 4/5 of total C-13-PLFA was in the gram-negative and some non-specific bacteria, suggesting these microorganisms as r-strategists capable of rapidly utilizing the most labile C. However, their C-13-PLFA content decreased by 70% after 60 days, probably as a result of death of these r-strategists. On the contrary, the C-13-PLFA in gram-positive bacteria, actinomycetes and fungi (K-strategists) was initially minimal but increased by 0.5-5 folds between days 2 and 60. Consequently, the necromass of dead r-strategists provided a high-quality C-N source to the K-strategists. We conclude that under severe C excess, N recycling from necromass is a much more efficient microbial strategy to cover the acute N demand than N acquisition from the recalcitrant SOM.
WOS
Держатели документа:
Chinese Acad Sci, Inst Subtrop Agr, Key Lab Agroecol Proc Subtrop Reg, Changsha 410125, Hunan, Peoples R China.
Chinese Acad Sci, Inst Subtrop Agr, Changsha Res Stn Agr & Environm Monitoring, Changsha 410125, Hunan, Peoples R China.
Chinese Acad Sci, State Key Lab Organ Geochem, Guangzhou Inst Geochem, Gongdong 510640, Peoples R China.
Yancheng Teachers Univ, Jiangsu Prov Key Lab Bioresources Coastal Saline, Jiangsu Coastal Biol Agr Synthet Innovat Ctr, Yancheng 224002, Peoples R China.
Chinese Acad Sci, Key Lab Ecosyst Network Observat & Modeling, Inst Geog Sci & Nat Resources Res, Beijing, Peoples R China.
Bangor Univ, Sch Environm Nat Resources & Geog, Bangor LL57 2UW, Gwynedd, Wales.
Univ Gottingen, Dept Agr Soil Sci, Dept Soil Sci Temperate Ecosyst, Gottingen, Germany.
Kazan Fed Univ, Inst Environm Sci, Kazan 420049, Russia.
RUDN Univ, Agrotechnol Inst, Moscow 117198, Russia.
Univ La Frontera, Dept Ciencias Quim & Recursos Nat, Temuco, Chile.
RAS, SB, VN Sukachev Inst Forest, Krasnoyarsk 660036, Russia.
Доп.точки доступа:
Cui, Jun; Zhu, Zhenke; Xu, Xingliang; Liu, Shoulong; Jones, Davey L.; Kuzyakov, Yakov; Shibistova, Olga; Wu, Jinshui; Ge, Tida; National Key Research and Development Program of China [2017YFD0800104]; National Natural Science Foundation of ChinaNational Natural Science Foundation of China [41430860, 41771337, 41977093, 31872695]; State Key Laboratory of Organic Geochemistry, GIGCAS [SKLOG-201728]; Hunan Province Base for Scientific and Technological Innovation Cooperation [2018WK4012]; Youth Innovation Team Project of Institute of Subtropical Agriculture, Chinese Academy of Sciences [2017QNCXTD_GTD]; NSFC-RFBR joint project [N 19-54-53026]; Innovation Groups of National Natural Science Foundation of Hunan Province [2019JJ10003]; Government Program of Competitive Growth of Kazan Federal University; RUDN University program 5-100
Рубрики:
SOIL ORGANIC-MATTER
LABILE CARBON
ENZYME-ACTIVITIES
PADDY SOIL
Кл.слова (ненормированные):
Soil carbon -- Priming effects -- Glucose mineralization -- Compound-specific -- C-13-PLFA analysis -- Necromass recycling -- Stoichiometric imbalance
SOIL ORGANIC-MATTER
LABILE CARBON
ENZYME-ACTIVITIES
PADDY SOIL
Кл.слова (ненормированные):
Soil carbon -- Priming effects -- Glucose mineralization -- Compound-specific -- C-13-PLFA analysis -- Necromass recycling -- Stoichiometric imbalance
Аннотация: The impact of increasing amounts of labile C input on priming effects (PE) on soil organic matter (SOM) mineralization remains unclear, particularly under anoxic conditions and under high C input common in microbial hotspots. PE and their mechanisms were investigated by a 60-day incubation of three flooded paddy soils amended with(13)C-labeled glucose equivalent to 50-500% of microbial biomass C (MBC). PE (14-55% of unamended soil) peaked at moderate glucose addition rates (i.e., 50-300% of MBC). Glucose addition above 300% of MBC suppressed SOM mineralization but intensified microbial N acquisition, which contradicted the common PE mechanism of accelerating SOM decomposition for N-supply (frequently termed as "N mining"). Particularly at glucose input rate higher than 3 g kg(-1) (i.e., 300-500% of MBC), mineral N content dropped on day 2 close to zero (1.1-2.5 mg N kg(-1)) because of microbial N immobilization. To cope with the N limitation, microorganisms greatly increased N-acetyl glucosaminidase and leucine aminopeptidase activities, while SOM decomposition decreased. Several discrete peaks of glucose-derived CO2 (contributing >80% to total CO2) were observed between days 13-30 under high glucose input (300-500% of MBC), concurrently with CH4 peaks. Such CO2 dynamics was distinct from the common exponential decay pattern, implicating the recycling and mineralization of C-13-enriched microbial necromass driven by glucose addition. Therefore, N recycling from necromass was hypothesized as a major mechanism to alleviate microbial N deficiency without SOM priming under excess labile C input. Compound-specific C-13-PLFA confirmed the redistribution of glucose-derived C among microbial groups, i.e., necromass recycling. Following glucose input, more than 4/5 of total C-13-PLFA was in the gram-negative and some non-specific bacteria, suggesting these microorganisms as r-strategists capable of rapidly utilizing the most labile C. However, their C-13-PLFA content decreased by 70% after 60 days, probably as a result of death of these r-strategists. On the contrary, the C-13-PLFA in gram-positive bacteria, actinomycetes and fungi (K-strategists) was initially minimal but increased by 0.5-5 folds between days 2 and 60. Consequently, the necromass of dead r-strategists provided a high-quality C-N source to the K-strategists. We conclude that under severe C excess, N recycling from necromass is a much more efficient microbial strategy to cover the acute N demand than N acquisition from the recalcitrant SOM.
WOS
Держатели документа:
Chinese Acad Sci, Inst Subtrop Agr, Key Lab Agroecol Proc Subtrop Reg, Changsha 410125, Hunan, Peoples R China.
Chinese Acad Sci, Inst Subtrop Agr, Changsha Res Stn Agr & Environm Monitoring, Changsha 410125, Hunan, Peoples R China.
Chinese Acad Sci, State Key Lab Organ Geochem, Guangzhou Inst Geochem, Gongdong 510640, Peoples R China.
Yancheng Teachers Univ, Jiangsu Prov Key Lab Bioresources Coastal Saline, Jiangsu Coastal Biol Agr Synthet Innovat Ctr, Yancheng 224002, Peoples R China.
Chinese Acad Sci, Key Lab Ecosyst Network Observat & Modeling, Inst Geog Sci & Nat Resources Res, Beijing, Peoples R China.
Bangor Univ, Sch Environm Nat Resources & Geog, Bangor LL57 2UW, Gwynedd, Wales.
Univ Gottingen, Dept Agr Soil Sci, Dept Soil Sci Temperate Ecosyst, Gottingen, Germany.
Kazan Fed Univ, Inst Environm Sci, Kazan 420049, Russia.
RUDN Univ, Agrotechnol Inst, Moscow 117198, Russia.
Univ La Frontera, Dept Ciencias Quim & Recursos Nat, Temuco, Chile.
RAS, SB, VN Sukachev Inst Forest, Krasnoyarsk 660036, Russia.
Доп.точки доступа:
Cui, Jun; Zhu, Zhenke; Xu, Xingliang; Liu, Shoulong; Jones, Davey L.; Kuzyakov, Yakov; Shibistova, Olga; Wu, Jinshui; Ge, Tida; National Key Research and Development Program of China [2017YFD0800104]; National Natural Science Foundation of ChinaNational Natural Science Foundation of China [41430860, 41771337, 41977093, 31872695]; State Key Laboratory of Organic Geochemistry, GIGCAS [SKLOG-201728]; Hunan Province Base for Scientific and Technological Innovation Cooperation [2018WK4012]; Youth Innovation Team Project of Institute of Subtropical Agriculture, Chinese Academy of Sciences [2017QNCXTD_GTD]; NSFC-RFBR joint project [N 19-54-53026]; Innovation Groups of National Natural Science Foundation of Hunan Province [2019JJ10003]; Government Program of Competitive Growth of Kazan Federal University; RUDN University program 5-100
Investigating Wood Decaying Fungi Diversity in Central Siberia, Russia Using ITS Sequence Analysis and Interaction with Host Trees
/ J. H. Park, I. N. Pavlov, M. J. Kim [et al.] // Sustainability. - 2020. - Vol. 12, Is. 6. - Ст. 2535, DOI 10.3390/su12062535. - Cited References:60. - This research was funded by the project on Korea Basidiomycota Resources Center of the National Research Foundation (NRF) funded by the Korean government, grant number NRF2015M3A9B8029237.
. - ISSN 2071-1050
РУБ Green & Sustainable Science & Technology + Environmental Sciences
Аннотация: Wood-decay fungi (WDF) play a significant role in recycling nutrients, using enzymatic and mechanical processes to degrade wood. Designated as a biodiversity hot spot, Central Siberia is a geographically important region for understanding the spatial distribution and the evolutionary processes shaping biodiversity. There have been several studies of WDF diversity in Central Siberia, but identification of species was based on morphological characteristics, lacking detailed descriptions and molecular data. Thus, the aim of this study was to identify WDF in Central Siberia, regarding the degradation of host trees based on both morphological and molecular analyses. We collected 106 WDF samples from Krasnoyarsk and the Republic of Khakassia in 2014 and 2017, and identified a total of 52 fungal species from six main host tree genera. In order to assess the host preference of the WDF, we examined previous literature, and data from this study. We confirmed a division in host preference of WDF between gymnosperms and angiosperms. DNA-based identification and host preference assessment of the WDF provide preliminary data on WDF diversity and their role in nutrient cycles in the ecosystem of Central Siberia. To fully understand WDF diversity in Central Siberia, continuous long-term surveys, including DNA sequence data, are needed.
WOS
Держатели документа:
Seoul Natl Univ, Sch Biol Sci, Seoul 08826, South Korea.
Seoul Natl Univ, Inst Microbiol, Seoul 08826, South Korea.
Russian Acad Sci, VN Sukachev Inst Forest, Siberian Branch, Lab Reforestat Mycol & Plant Pathol, Krasnoyarsk 660036, Russia.
Reshetnev Siberian State Univ Sci & Technol, Dept Chem Technol Wood & Biotechnol, Krasnoyarsk 660049, Russia.
Natl Inst Forest Sci, Forest Prod Dept, Wood Utilizat Div, Seoul 02455, South Korea.
Changwon Natl Univ, Dept Biol & Chem, Chang Won 51140, South Korea.
Lingnan Univ, Sci Unit, Tuen Mun, Peoples R China.
Доп.точки доступа:
Park, Ji-Hyun; Pavlov, Igor N.; Kim, Min-Ji; Park, Myung Soo; Oh, Seung-Yoon; Park, Ki Hyeong; Fong, Jonathan J.; Lim, Young Woon; Pavlov, Igor; project on Korea Basidiomycota Resources Center of the National Research Foundation (NRF) - Korean government [NRF2015M3A9B8029237]
Рубрики:
POLYPORE APHYLLOPHORALES
BOREAL FORESTS
EAST SIBERIA
RIVER-BASIN
Кл.слова (ненормированные):
Central Siberia -- ITS sequence -- host preference -- wood-decay fungi
POLYPORE APHYLLOPHORALES
BOREAL FORESTS
EAST SIBERIA
RIVER-BASIN
Кл.слова (ненормированные):
Central Siberia -- ITS sequence -- host preference -- wood-decay fungi
Аннотация: Wood-decay fungi (WDF) play a significant role in recycling nutrients, using enzymatic and mechanical processes to degrade wood. Designated as a biodiversity hot spot, Central Siberia is a geographically important region for understanding the spatial distribution and the evolutionary processes shaping biodiversity. There have been several studies of WDF diversity in Central Siberia, but identification of species was based on morphological characteristics, lacking detailed descriptions and molecular data. Thus, the aim of this study was to identify WDF in Central Siberia, regarding the degradation of host trees based on both morphological and molecular analyses. We collected 106 WDF samples from Krasnoyarsk and the Republic of Khakassia in 2014 and 2017, and identified a total of 52 fungal species from six main host tree genera. In order to assess the host preference of the WDF, we examined previous literature, and data from this study. We confirmed a division in host preference of WDF between gymnosperms and angiosperms. DNA-based identification and host preference assessment of the WDF provide preliminary data on WDF diversity and their role in nutrient cycles in the ecosystem of Central Siberia. To fully understand WDF diversity in Central Siberia, continuous long-term surveys, including DNA sequence data, are needed.
WOS
Держатели документа:
Seoul Natl Univ, Sch Biol Sci, Seoul 08826, South Korea.
Seoul Natl Univ, Inst Microbiol, Seoul 08826, South Korea.
Russian Acad Sci, VN Sukachev Inst Forest, Siberian Branch, Lab Reforestat Mycol & Plant Pathol, Krasnoyarsk 660036, Russia.
Reshetnev Siberian State Univ Sci & Technol, Dept Chem Technol Wood & Biotechnol, Krasnoyarsk 660049, Russia.
Natl Inst Forest Sci, Forest Prod Dept, Wood Utilizat Div, Seoul 02455, South Korea.
Changwon Natl Univ, Dept Biol & Chem, Chang Won 51140, South Korea.
Lingnan Univ, Sci Unit, Tuen Mun, Peoples R China.
Доп.точки доступа:
Park, Ji-Hyun; Pavlov, Igor N.; Kim, Min-Ji; Park, Myung Soo; Oh, Seung-Yoon; Park, Ki Hyeong; Fong, Jonathan J.; Lim, Young Woon; Pavlov, Igor; project on Korea Basidiomycota Resources Center of the National Research Foundation (NRF) - Korean government [NRF2015M3A9B8029237]
Investigating wood decaying fungi diversity in central Siberia, Russia using ITS sequence analysis and interaction with host trees
/ J.-H. Park, I. N. Pavlov, M.-J. Kim [et al.] // Sustainability. - 2020. - Vol. 12, Is. 6. - Ст. 2535, DOI 10.3390/su12062535
. - ISSN 2071-1050
Кл.слова (ненормированные):
Central Siberia -- Host preference -- ITS sequence -- Wood-decay fungi -- biodiversity -- fungus -- genetic analysis -- host preference -- spatial distribution -- spatiotemporal analysis -- species diversity -- tree -- Khakassia -- Khakassia -- Krasnoyarsk -- Russian Federation -- Siberia -- Fungi -- Gymnospermae -- Magnoliophyta
Аннотация: Wood-decay fungi (WDF) play a significant role in recycling nutrients, using enzymatic and mechanical processes to degrade wood. Designated as a biodiversity hot spot, Central Siberia is a geographically important region for understanding the spatial distribution and the evolutionary processes shaping biodiversity. There have been several studies of WDF diversity in Central Siberia, but identification of species was based on morphological characteristics, lacking detailed descriptions and molecular data. Thus, the aim of this study was to identify WDF in Central Siberia, regarding the degradation of host trees based on both morphological and molecular analyses. We collected 106 WDF samples from Krasnoyarsk and the Republic of Khakassia in 2014 and 2017, and identified a total of 52 fungal species from six main host tree genera. In order to assess the host preference of the WDF, we examined previous literature, and data from this study. We confirmed a division in host preference of WDF between gymnosperms and angiosperms. DNA-based identification and host preference assessment of the WDF provide preliminary data on WDF diversity and their role in nutrient cycles in the ecosystem of Central Siberia. To fully understand WDF diversity in Central Siberia, continuous long-term surveys, including DNA sequence data, are needed. © 2020 by the authors. Licensee MDPI, Basel, Switzerland.
Scopus
Держатели документа:
School of Biological Sciences and Institute of Microbiology, Seoul National University, Seoul, 08826, South Korea
Laboratory of Reforestation, Mycology and Plant Pathology, V. N. Sukachev Institute of Forest, Siberian Branch of Russian Academy of Sciences, Krasnoyarsk, 660036, Russian Federation
Department of Chemical Technology ofWood and Biotechnology, Reshetnev Siberian State University of Science and Technology, Krasnoyarsk, 660049, Russian Federation
Wood Utilization Division, Forest Products Department, National Institute of Forest Science, Seoul, 02455, South Korea
Department of Biology and Chemistry, Changwon National University, Changwon, 51140, South Korea
Science Unit, Lingnan University, Tuen Mun, Hong Kong
Доп.точки доступа:
Park, J. -H.; Pavlov, I. N.; Kim, M. -J.; Park, M. S.; Oh, S. -Y.; Park, K. H.; Fong, J. J.; Lim, Y. W.
Кл.слова (ненормированные):
Central Siberia -- Host preference -- ITS sequence -- Wood-decay fungi -- biodiversity -- fungus -- genetic analysis -- host preference -- spatial distribution -- spatiotemporal analysis -- species diversity -- tree -- Khakassia -- Khakassia -- Krasnoyarsk -- Russian Federation -- Siberia -- Fungi -- Gymnospermae -- Magnoliophyta
Аннотация: Wood-decay fungi (WDF) play a significant role in recycling nutrients, using enzymatic and mechanical processes to degrade wood. Designated as a biodiversity hot spot, Central Siberia is a geographically important region for understanding the spatial distribution and the evolutionary processes shaping biodiversity. There have been several studies of WDF diversity in Central Siberia, but identification of species was based on morphological characteristics, lacking detailed descriptions and molecular data. Thus, the aim of this study was to identify WDF in Central Siberia, regarding the degradation of host trees based on both morphological and molecular analyses. We collected 106 WDF samples from Krasnoyarsk and the Republic of Khakassia in 2014 and 2017, and identified a total of 52 fungal species from six main host tree genera. In order to assess the host preference of the WDF, we examined previous literature, and data from this study. We confirmed a division in host preference of WDF between gymnosperms and angiosperms. DNA-based identification and host preference assessment of the WDF provide preliminary data on WDF diversity and their role in nutrient cycles in the ecosystem of Central Siberia. To fully understand WDF diversity in Central Siberia, continuous long-term surveys, including DNA sequence data, are needed. © 2020 by the authors. Licensee MDPI, Basel, Switzerland.
Scopus
Держатели документа:
School of Biological Sciences and Institute of Microbiology, Seoul National University, Seoul, 08826, South Korea
Laboratory of Reforestation, Mycology and Plant Pathology, V. N. Sukachev Institute of Forest, Siberian Branch of Russian Academy of Sciences, Krasnoyarsk, 660036, Russian Federation
Department of Chemical Technology ofWood and Biotechnology, Reshetnev Siberian State University of Science and Technology, Krasnoyarsk, 660049, Russian Federation
Wood Utilization Division, Forest Products Department, National Institute of Forest Science, Seoul, 02455, South Korea
Department of Biology and Chemistry, Changwon National University, Changwon, 51140, South Korea
Science Unit, Lingnan University, Tuen Mun, Hong Kong
Доп.точки доступа:
Park, J. -H.; Pavlov, I. N.; Kim, M. -J.; Park, M. S.; Oh, S. -Y.; Park, K. H.; Fong, J. J.; Lim, Y. W.