Труды сотрудников ИЛ им. В.Н. Сукачева СО РАН

/ N. Kirichenko [et al.] // ZooKeys. - 2018. - Is. 736. - P79-118, DOI 10.3897/zookeys.736.20739. - Cited References:57. - We thank E.J. van Nieukerken (The Netherlands), H. Kuroko, A. Kawakita, N. Hirano, K. Niimi, M. Murase, S. Yagi, C. Tsuji (Japan), G. Deschka (Austria), M. Jones (USA), A. Lastuvka, Z. Lastuvka (Czech Republic), A. Cama, J. Nel (France) and P. van Wielink (The Netherlands) for providing specimens and / or DNA barcodes of Phyllocnistis spp., J.C. Koster (The Netherlands) for preparing the genitalia slide of P. cornella, C. van den Berg (The Netherlands) for helping with collection of P. cornella in Japan, S.V. Baryshnikova and M.G. Ponomarenko (Russia) for checking the collections of their institutes for Cornus-feeding Phyllocnistis and for their useful remarks. Special thanks to R. Brito and G.R.P Moreira (Brazil) for their careful reading of the latest version of our manuscript, to D. Lees (UK) for checking the English, to the reviewers R. Rougerie (France) and D. Wagner (USA) and to the editor E.J. van Nieukerken for their insightful comments and suggestions. N. Kirichenko was supported by a fellowship of LE STUDIUM (R), Institute for advanced studies - Loire Valley, France (grant No. INRA-URZF-007); French Embassy in Russia, Bourse Metchnikov (grant No. 908981L, Campus France) and by the Russian Foundation for Basic Research (grant No. 15-29-02645). T. Hirowatari. and I. Ohshima were supported by JSPS KAKENHI (grant No. JP16H05766). . - ISSN 1313-2989. - ISSN 1313-2970РУБ Zoology

Аннотация: During an ongoing DNA-barcoding campaign of the leaf-mining moths that feed on woody plants in Northeast Asia, four lineages of the genus Phyllocnistis (Gracillariidae, Phyllocnistinae) were discovered on dogwood (Cornus spp): P. cornella Ermolaev, 1987 on C. controversa Hemsl. (Japan: Hokkaido) and three new species - one feeding on C. controversa, C. florida L. and C. macrophylla Wall. in Japan (Honshu, Shikoku, Kyushu), a second species on C. macrophylla in China (Yunnan) and a third on Siberian dogwood Cornus alba L. in Russia (Siberia). All these species showed differences in morphology, in the barcode region of the cytochrome c oxidase I gene and in two nuclear genes (histone H3 and 28S ribosomal RNA). No correlation was found between the deep mitochondrial splits observed and the Wolbachia infection pattern. Based on both morphological and molecular evidence, the three recently discovered lineages are described here as new species: P. indistincta Kobayashi & Triberti, sp. n. (Japan), P. saepta Kirichenko, Ohshima & Huang, sp. n. (China) and P. verae Kirichenko, Triberti & Lopez-Vaamonde, sp. n. (Russia). In addition, the authors re-describe the adult morphology of P. cornella, provide the first record of this species from Japan and highlight the diagnostic characters that allow these Cornus-feeding Phyllocnistis species to be distinguished.

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Держатели документа:
RAS, Sukachev Inst Forest, SB, Akademgorodok 50-28, Krasnoyarsk 660036, Russia.
Siberian Fed Univ, 79 Svobodny Pr, Krasnoyarsk 660041, Russia.
INRA, UR0633, Zool Forestiere, F-45075 Orleans, France.
Museo Civ Storia Nat, Lungadige Porta Vittoria 9, I-37129 Verona, Italy.
Osaka Prefecture Univ, Grad Sch Life & Environm Sci, Entomol Lab, Sakai, Osaka 5998531, Japan.
Kyushu Univ, Fac Agr, Entomol Lab, 6-10-1 Hakozaki, Fukuoka 8128581, Japan.
Univ Hawaii, Dept Plant & Environm Protect Sci, 3050 Maile Way, Honolulu, HI 96822 USA.
Nat Biodivers Ctr, POB 9557, NL-2300 RA Leiden, Netherlands.
Kyoto Prefectural Univ, Dept Life & Environm Sci, Kyoto 6068522, Japan.
Hunan Agr Univ, Hunan Prov Key Lab Biol & Control Plant Dis & Ins, Changsha 410128, Hunan, Peoples R China.
South China Agr Univ, Dept Entomol, Guangzhou 510642, Guangdong, Peoples R China.
Univ Francois Rabelais Tours, CNRS, Inst Rech Biol Insecte, UMR 7261,UFR Sci & Tech, F-37200 Tours, France.

Доп.точки доступа:
Kirichenko, Natalia; Triberti, Paolo; Kobayashi, Shigeki; Hirowatari, Toshiya; Doorenweerd, Camiel; Ohshima, Issei; Huang, Guo-Hua; Wang, Min; Magnoux, Emmanuelle; Lopez-Vaamonde, Carlos; LE STUDIUM(R), Institute for advanced studies - Loire Valley, France [INRA-URZF-007]; French Embassy in Russia, Bourse Metchnikov (Campus France) [908981L]; Russian Foundation for Basic Research [15-29-02645]; JSPS KAKENHI [JP16H05766]

/ C. Lopez-Vaamonde, N. Kirichenko, A. Cama [et al.] // Front. ecol. evol. - 2021. - Vol. 9. - Ст. 626752, DOI 10.3389/fevo.2021.626752 . - ISSN 2296-701X
Аннотация: Gracillariidae is the most species-rich leaf-mining moth family with over 2,000 described species worldwide. In Europe, there are 263 valid named species recognized, many of which are difficult to identify using morphology only. Here we explore the use of DNA barcodes as a tool for identification and species discovery in European gracillariids. We present a barcode library including 6,791 COI sequences representing 242 of the 263 (92%) resident species. Our results indicate high congruence between morphology and barcodes with 91.3% (221/242) of European species forming monophyletic clades that can be identified accurately using barcodes alone. The remaining 8.7% represent cases of non-monophyly making their identification uncertain using barcodes. Species discrimination based on the Barcode Index Number system (BIN) was successful for 93% of species with 7% of species sharing BINs. We discovered as many as 21 undescribed candidate species, of which six were confirmed from an integrative approach; the other 15 require additional material and study to confirm preliminary evidence. Most of these new candidate species are found in mountainous regions of Mediterranean countries, the South-Eastern Alps and the Balkans, with nine candidate species found only on islands. In addition, 13 species were classified as deep conspecific lineages, comprising a total of 27 BINs with no intraspecific morphological differences found, and no known ecological differentiation. Double-digest restriction-site associated DNA sequencing (ddRAD) analysis showed strong mitonuclear discrepancy in four out of five species studied. This discordance is not explained by Wolbachia-mediated genetic sweeps. Finally, 26 species were classified as “unassessed species splits” containing 71 BINs and some involving geographical isolation or ecological specialization that will require further study to test whether they represent new cryptic species. © Copyright © 2021 Lopez-Vaamonde, Kirichenko, Cama, Doorenweerd, Godfray, Guiguet, Gomboc, Huemer, Landry, Lastuvka, Lastuvka, Lee, Lees, Mutanen, van Nieukerken, Segerer, Triberti, Wieser and Rougerie.

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Держатели документа:
INRAE, URZF, Orleans, France
IRBI, UMR 7261, CNRS-Universite de Tours, Tours, France
Sukachev Institute of Forest, Siberian Branch of Russian Academy of Sciences, Federal Research Center “Krasnoyarsk Science Center SB RAS, Krasnoyarsk, Russian Federation
Siberian Federal University, Krasnoyarsk, Russian Federation
La Chapelle sur Loire, France
Department of Plant and Environmental Protection Sciences, College of Tropical Agriculture and Human Resources, University of Hawaii, Honolulu, HI, United States
Naturalis Biodiversity Center, Leiden, Netherlands
Department of Zoology, University of Oxford, Oxford, United Kingdom
Department of Biology, The Pennsylvania State University, University Park, PA, United States
Gancani, Beltinci, Slovenia
Tiroler Landesmuseen Betriebsges.m.b.H, Sammlungs- und Forschungszentrum, Hall in Tirol, Austria
Agriculture and Agri-Food Canada, Ottawa Research and Development Centre, Ottawa, ON, Canada
Prostejov, Czech Republic
Faculty of Agronomy, Mendel University, Brno, Czech Republic
Ecology and Genetics Research Unit, University of Oulu, Oulu, Finland
Department of Life Sciences, Natural History Museum, London, United Kingdom
Staatliche Naturwissenschaftliche Sammlungen Bayerns, Zoologische Staatssammlung Munchen (SNSB-ZSM), Munich, Germany
Museo Civico di Storia Naturale, Zoologia, Verona, Italy
Landesmuseum fur Karnten, Abteilung Zoologie, Sammlungs- und Wissenschaftszentrum, Klagenfurt, Austria
Institut de Systematique, Museum national d’Histoire naturelle, CNRS, Sorbonne Universite, EPHE, Universite des Antilles, Paris, France

Доп.точки доступа:
Lopez-Vaamonde, C.; Kirichenko, N.; Cama, A.; Doorenweerd, C.; Godfray, H. C.J.; Guiguet, A.; Gomboc, S.; Huemer, P.; Landry, J. -F.; Lastuvka, A.; Lastuvka, Z.; Lee, K. M.; Lees, D. C.; Mutanen, M.; van Nieukerken, E. J.; Segerer, A. H.; Triberti, P.; Wieser, C.; Rougerie, R.

/ C. Lopez-Vaamonde, N. Kirichenko, A. Cama [et al.] // Front. Ecol. Evol. - 2021. - Vol. 9. - Ст. 626752, DOI 10.3389/fevo.2021.626752. - Cited References:88. - This work was funded by the Studium (France) to both NK and DL to work as research fellows at INRAE Orleans; the Russian Foundation for Basic Research (No. 19-04-01029-a) and the basic project of Sukachev Institute of Forest SB RAS (project No. 0287-2021-0011) to NK; the Region Centre (France) project ENDOFEED (201000047141) to CL-V; the Ministry of Agriculture (France) project PASSIFOR to CL-V and RR; the Academy of Finland (grant number: 277984) to MM and the Kvantum Institute to KL; Kone foundation, Finnish Cultural foundation for financing the FinBOL (Finnish Barcode of Life) 2011-2015, and the Academy of Finland for financing FinBOL through the FinBIF national infrastructure project since 2014; Agriculture & Agri-Food Canada, Science and Technology Branch (projects Nos. J-000977 and J-002279) to J-FL; Promotion of Educational Policies, University and Research Department of the Autonomous Province of Bolzano - South Tyrol and Austrian Federal Ministry of Science, Research and Economics in the framework of ABOL (Austrian Barcode of Life) to PH. CD's salary and all DNA sequencing at Naturalis Biodiversity Center was funded through the Dutch Economic Restructuring Fund (FES). AS was supported by the Bavarian Ministry of Science and Art (Germany) project BFB and the Federal Ministry of Education and Research (Germany) project GBOL. Funding for DNA barcoding was also partly provided by the Government of Canada through Genome Canada, the Ontario Genomics Institute in support of the International Barcode of Life project, and by the National Science and Engineering Research Council of Canada. . - ISSN 2296-701XРУБ Ecology

Аннотация: Gracillariidae is the most species-rich leaf-mining moth family with over 2,000 described species worldwide. In Europe, there are 263 valid named species recognized, many of which are difficult to identify using morphology only. Here we explore the use of DNA barcodes as a tool for identification and species discovery in European gracillariids. We present a barcode library including 6,791 COI sequences representing 242 of the 263 (92%) resident species. Our results indicate high congruence between morphology and barcodes with 91.3% (221/242) of European species forming monophyletic clades that can be identified accurately using barcodes alone. The remaining 8.7% represent cases of non-monophyly making their identification uncertain using barcodes. Species discrimination based on the Barcode Index Number system (BIN) was successful for 93% of species with 7% of species sharing BINs. We discovered as many as 21 undescribed candidate species, of which six were confirmed from an integrative approach; the other 15 require additional material and study to confirm preliminary evidence. Most of these new candidate species are found in mountainous regions of Mediterranean countries, the South-Eastern Alps and the Balkans, with nine candidate species found only on islands. In addition, 13 species were classified as deep conspecific lineages, comprising a total of 27 BINs with no intraspecific morphological differences found, and no known ecological differentiation. Double-digest restriction-site associated DNA sequencing (ddRAD) analysis showed strong mitonuclear discrepancy in four out of five species studied. This discordance is not explained by Wolbachia-mediated genetic sweeps. Finally, 26 species were classified as "unassessed species splits" containing 71 BINs and some involving geographical isolation or ecological specialization that will require further study to test whether they represent new cryptic species.

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Держатели документа:
URZF, INRAE, Orleans, France.
Univ Tours, IRBI, UMR 7261, CNRS, Tours, France.
RAS, SB, Sukachev Inst Forest, Fed Res Ctr,Krasnoyarsk Sci Ctr, Krasnoyarsk, Russia.
Siberian Fed Univ, Krasnoyarsk, Russia.
Univ Hawaii, Coll Trop Agr & Human Resources, Dept Plant & Environm Protect Sci, Honolulu, HI USA.
Nat Biodivers Ctr, Leiden, Netherlands.
Univ Oxford, Dept Zool, Oxford, England.
Penn State Univ, Dept Biol, University Pk, PA 16802 USA.
Gancani, Beltinci, Slovenia.
Tiroler Landesmuseen BetriebsgesmbH Sammlungs & F, Hall In Tirol, Austria.
Agr & Agri Food Canada, Ottawa Res & Dev Ctr, Ottawa, ON, Canada.
Mendel Univ Brno, Fac Agron, Brno, Czech Republic.
Univ Oulu, Ecol & Genet Res Unit, Oulu, Finland.
Nat Hist Museum, Dept Life Sci, London, England.
Staatliche Nat Wissensch Sammlungen Bayerns, Zool Staatssammlung Munchen SNSB ZSM, Munich, Germany.
Museo Civ Storia Nat, Zool, Verona, Italy.
Landesmuseum Karnten, Abt Zool Sammlungs & Wissensch Zentrum, Klagenfurt, Austria.
Univ Antilles, Inst Systemat Evolut Biodivers ISYEB, Museum Natl Hist Nat, CNRS,Sorbonne Univ,EPHE, Paris, France.

Доп.точки доступа:
Lopez-Vaamonde, Carlos; Kirichenko, Natalia; Cama, Alain; Doorenweerd, Camiel; Godfray, H. Charles J.; Guiguet, Antoine; Gomboc, Stanislav; Huemer, Peter; Landry, Jean-Francois; Lastuvka, Ales; Lastuvka, Zdenek; Lee, Kyung Min; Lees, David C.; Mutanen, Marko; van Nieukerken, Erik J.; Segerer, Andreas H.; Triberti, Paolo; Wieser, Christian; Rougerie, Rodolphe; Studium (France); Russian Foundation for Basic ResearchRussian Foundation for Basic Research (RFBR) [19-04-01029-a]; basic project of Sukachev Institute of Forest SB RAS [0287-2021-0011]; Region Centre (France) project ENDOFEED [201000047141]; Ministry of Agriculture (France) project PASSIFOR; Academy of FinlandAcademy of FinlandEuropean Commission [277984]; Kone foundation; Finnish Cultural foundationFinnish Cultural Foundation; Agriculture & Agri-Food Canada, Science and Technology Branch [J-000977, J-002279]; Promotion of Educational Policies, University and Research Department of the Autonomous Province of Bolzano - South TyrolPronvincia Autonoma di Bolzano; Austrian Federal Ministry of Science, Research and Economics in the framework of ABOL; Dutch Economic Restructuring Fund (FES); Bavarian Ministry of Science and Art (Germany) project BFB; Federal Ministry of Education and Research (Germany) project GBOL; Government of Canada through Genome CanadaGenome Canada; Ontario Genomics Institute in support of the International Barcode of Life project; National Science and Engineering Research Council of CanadaNatural Sciences and Engineering Research Council of Canada (NSERC); Kvantum Institute; Academy of FinlandAcademy of FinlandEuropean Commission