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    Genetic variability in Scotch pine in the southeastern part of its range
[Text] / A. Y. Larionova // Russ. J. Genet. - 2002. - Vol. 38, Is. 12. - P1391-1396, DOI 10.1023/A:1021639806123. - Cited References: 34 . - 6. - ISSN 1022-7954
РУБ Genetics & Heredity

Аннотация: The main parameters of genetic variability have been determined in an isolated natural Scotch pine population from Chita oblast (Tsasuchei Forest) by analysis of 19 genes coding for nine enzymes: GDH, IDH, LAP, PGM, AAT, ADH, MDH, 6-PGD, and DIA. Polymorphic genes constituted 63.2% of all structural genes studied in the population at the 99% polymorphism criterion. The mean number of alleles per locus was 1.63. The observed and expected heterozygosities were 0.237 and 0.251, respectively. These estimates are close to the corresponding mean values for Scotch pine according to the data on 18 or more structural genes.

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Держатели документа:
Russian Acad Sci, Sukachev Inst Forestry, Krasnoyarsk 660036, Russia

Доп.точки доступа:
Larionova, A.Y.

    INHERITANCE OF ALLOZYME VARIANTS IN SIBERIAN SPRUCE (PICEA-OBOVATA LEDEB)
[Текст] / A. Y. LARIONOVA // Genetika. - 1995. - Vol. 31, Is. 9. - С. 1261-1267. - Cited References: 43 . - 7. - ISSN 0016-6758
РУБ Genetics & Heredity

Аннотация: By means of electrophoresis followed by histochemical staining, water-soluble enzymes of megagametophytes and embryos of seeds collected from 42 trees in two natural populations of Picea obovata were studied. A detailed analysis of electrophoretic patterns of enzymes ADH, GDH, 6-PGD, IDH, MDH, LAP, EST, and GOT is presented. It is shown that the allozyme diversity of the enzymes assayed is coded for by at least 20 loci. Fine electrophoretic resolution was obtained for the products of 16 loci, four of them (Mdh-1, Mdh-2, Got-1, and Got-2) were monomorphic, while the remaining loci (Adh-1, Adh-2, 6-Pgd-2, 6-Pgd-3, Mdh-3, Idh-2, Lap-1, Lap-2, Est-1, Est-3, Got-3 and Gdh) appeared polymorphic. Segregation data confirms the monogenic inheritance of the allozyme variants revealed.


Доп.точки доступа:
LARIONOVA, A.Y.

    Microsatellite loci polymorphism of chloroplast DNA of scots pine (Pinus sylvestris L.) in Asia and eastern Europe
[Text] / V. L. Semerikov [et al.] // Russ. J. Genet. - 2014. - Vol. 50, Is. 6. - P577-585, DOI 10.1134/S1022795414040127. - Cited References: 38. - This work was supported by the Russian Foundation for Basic Researches, project nos. 11-04-92226-Mong_a and 12-04-00062-a, and by the Program of the Ural Branch of the Russian Academy of Sciences, project no. 12-I-4-2064. The authors thank the director of the Institute for Botany, Academy of Science of Mongolia, Academician Ch. Dzhugarzhav, and the director of the branch of FBI "Roslesoashchita" Centre of Forest Protection, Altai region, A.Ya. Bondarev, for help with material collection. . - ISSN 1022-7954. - ISSN 1608-3369
РУБ Genetics & Heredity

Аннотация: The variability of four microsatellite loci of chloroplast DNA was studied in 38 populations of Pinus sylvestris in the European part of Russia, in Siberia, Kazakhstan, Transbaikalia and Mongolia. High variability was observed in all regions. In total, 152 haplotypes were identified. The level of population differentiation R (ST) was 2.1%. The differentiation of three geographical groups of populations (European, Siberian-Kazakhstan and Transbaikalian-Mongolian) was insignificant (R (CT) = 0.004). At the same time, some rare haplotypes were found to be specific for a certain geographical region. Distribution of the rare haplotypes, which differentiated European populations from Asian populations and Mongolian and Transbaikalian populations from the Siberian, showed the independence of the history of these regions. This corresponds more to the hypothesis that the modern area of Pinus sylvestris originated via settlement from many origins than to the hypothesized single center of the post-glacial recolonization. The distribution of the pairwise differences between the individual specimens corresponded to the model of sudden population growth. The assessments of the age of this event for Pinus sylvestris (4.5-4.7 million years), which were obtained on the basis of this model, significantly exceeded the age of the Quaternary. Therefore, the revealed population growth is hardly due to the changes in flora related with the glaciation, but rather mirrors the moment of the species formation.

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Держатели документа:
[Semerikov, V. L.
Semerikova, S. A.
Dymshakova, O. S.] Russian Acad Sci, Inst Plant & Anim Ecol, Ural Branch, Ekaterinburg 620144, Russia
[Zatsepina, K. G.
Tarakanov, V. V.
Tikhonova, I. V.
Ekart, A. K.] Russian Acad Sci, Sukachev Forest Inst, Siberian Branch, Krasnoyarsk 660036, Russia
[Vidyakin, A. I.] Russian Acad Sci, Inst Biol, Ural Branch, Komi Sci Ctr, Kirov 610035, Russia
[Jamiyansuren, S.] Acad Sci Mongolia, Inst Bot, Ulaanbaatar 210361, Mongol Peo Rep
[Rogovtsev, R. V.] Ctr Forest Protect Novosibirsk Reg, Novosibirsk 630015, Russia
[Kalchenko, L. I.] Ctr Forest Protect Altai Reg, Barnaul 656056, Russia
ИЛ СО РАН

Доп.точки доступа:
Semerikov, V.L.; Semerikova, S.A.; Dymshakova, O.S.; Zatsepina, K.G.; Tarakanov, V.V.; Tikhonova, I.V.; Ekart, A.K.; Vidyakin, A.I.; Jamiyansuren, S...; Rogovtsev, R.V.; Kalchenko, L.I.; Russian Foundation for Basic Researches [11-04-92226-Mong_a, 12-04-00062-a]; Program of the Ural Branch of the Russian Academy of Sciences [12-I-4-2064]

    Development of new mitochondrial DNA markers in Scots pine (Pinus sylvestris L.) for population and phylogeographic studies
[Text] / V. L. Semerikov [et al.] // Russ. J. Genet. - 2015. - Vol. 51, Is. 12. - P1199-1203, DOI 10.1134/S1022795415120108. - Cited References:20. - We thank Y.Y. Hhrunyk, A. I. Vidjakin, V.V. Tarakanov, E.V. Hantemirova, and I.V. Tikhonova for assistance with the pine material collection. The study was supported by Russian Foundation for Basic Research (grant 13-04-01028) and by Russian Federation Government (grant 14.Y26.31.0004). . - ISSN 1022-7954. - ISSN 1608-3369
РУБ Genetics & Heredity

Аннотация: Fragments of genomic DNA of Scots pine (Pinus sylvestris L.) homologous to the mitochondrial DNA (mtDNA) contigs of Norway spruce (Picea abies (L.) Karst.) and loblolly pine (Pinus taeda L.) were resequenced in a sample of the Scots pine trees of European, Siberian, Mongolian, and Caucasian origin in order to develop mtDNA markers. Flanking non-coding regions of some mitochondrial genes were also investigated and resequenced. Five single nucleotide polymorphisms (SNPs) and a single minisatellite locus were identified. Caucasian samples differed from the rest by three SNPs. Two SNPs have been linked to an early described marker in the first intron of the nad7 gene, and all together revealed three haplotypes in European populations. No variable SNPs were found in the Siberian and Mongolian populations. The minisatellite locus contained 41 alleles across European, Siberian, and Mongolian populations, but, this locus demonstrated a weak population differentiation (F (ST) = 5.8), probably due to its high mutation rate.

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Держатели документа:
Russian Acad Sci, Ural Branch, Inst Plant & Anim Ecol, Ekaterinburg 620144, Russia.
Siberian Fed Univ, Genome Res & Educ Ctr, Krasnoyarsk 660036, Russia.
Russian Acad Sci, Siberian Branch, Sukachev Inst Forest, Krasnoyarsk 660036, Russia.
Univ Gottingen, D-37077 Gottingen, Germany.
Russian Acad Sci, Vavilov Inst Gen Genet, Moscow 119991, Russia.
Texas A&M Univ, College Stn, TX 77843 USA.

Доп.точки доступа:
Semerikov, V. L.; Putintseva, Yu. A.; Oreshkova, N. V.; Semerikova, S. A.; Krutovsky, K. V.; Russian Foundation for Basic Research [13-04-01028]; Russian Federation Government [14.Y26.31.0004]

    Genetic Polymorphism of Siberian Stone Pine (Pinus sibirica Du Tour) in Kuznetsk Alatau
/ N. V. Oreshkova, T. S. Sedel'nikova, S. P. Efremov, A. V. Pimenov // Contemp. Probl. Ecol. - 2020. - Vol. 13, Is. 6. - P569-576, DOI 10.1134/S1995425520060116. - Cited References:28 . - ISSN 1995-4255. - ISSN 1995-4263
РУБ Ecology

Аннотация: The DNA polymorphism of seven coenopopulations of Siberian stone pine (Pinus sibirica Du Tour) growing in a region which is typical for mountain taiga pine forests-the northeastern part of the Kuznetsk Alatau-has been studied. According to the data of 11 nuclear microsatellite loci, 44 allelic variants which significantly differed between the studied coenopopulations in composition and frequency of occurrence are identified. The highest level of allelic diversity is found in the Ps_80612 and Ps_1502048 loci, in which eight and seven alleles are detected, respectively. The calculation of the main parameters of genetic diversity have shown, on the whole, a relatively low level of polymorphism of the studied samples (N-A = 3.078, N-E = 1.877, H-E = 0.445, and H-O = 0.401). An analysis of the degree of subdivision of coenopopulations has revealed that about 95% of the total genetic diversity is concentrated within populations, while the interpopulation component accounts for only about 5% (F-ST = 0.049). The diagnosed differences in the level of P. sibirica genetic polymorphism are determined by several factors: the presence of orographic and phytocenotic barriers between the coenopopulations, which define the directions of seed propagation vectors along the watercourses of river basins that form the Chulym River in the eastern sector of the Kuznetsk Alatau and Tom River in the western sector; a significant level of bioclimatic and environmental extremeness of habitats of coenopopulations in accordance with the height above sea level; and anthropogenic pressure, including periodic deforestation and recreational impact on coenopopulations located near settlements. These factors, which have a significant microevolutionary component, determine the adaptation trends of coenopopulations of P. sibirica and morphological singularities and reproductive potential of trees and, ultimately, they control their genetic polymorphism in the studied part of the Kuznetsk Alatau.

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Держатели документа:
Russian Acad Sci, Fed Res Ctr, Kola Sci Ctr, Siberian Branch, Krasnoyarsk 660036, Russia.
Siberian Fed Univ, Krasnoyarsk 660041, Russia.
Russian Acad Sci, Sukachev Inst Forestry, Siberian Branch, Krasnoyarsk 660036, Russia.

Доп.точки доступа:
Oreshkova, N., V; Sedel'nikova, T. S.; Efremov, S. P.; Pimenov, A., V