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Algorithms of self-adaptation for atmospheric model designing [Text] / J. P. Lankin, T. F. Baskanova ; ed.: GG Matvienko, o, GG Matvie // TENTH JOINT INTERNATIONAL SYMPOSIUM ON ATMOSPHERIC AND OCEAN OPTICS/ATMOSPHERIC PHYSICS, PT 2: LASER SENSING AND ATMOSPHERIC PHYSICS. Ser. PROCEEDINGS OF THE SOCIETY OF PHOTO-OPTICAL INSTRUMENTATION ENGINEERS (SPIE) : SPIE-INT SOC OPTICAL ENGINEERING, 2004. - Vol. 5397: 10th Joint International Symposium on Atmospheric and Ocean Optics/Atmospheric Physics (JUN 24-28, 2003, Tomsk, RUSSIA). - P. 260-270, DOI 10.1117/12.548609. - Cited References: 23 . - ISBN 0277-786X. - ISBN 0-8194-5316-1

РУБ Environmental Sciences + Meteorology & Atmospheric Sciences + Optics

Аннотация: The paper describes the principal limitations of the traditional methods used to construct atmospheric models. These limitations would not allow any fundamental improvement of atmospheric modeling. Ways are proposed to overcome the current limitations, based oil the methodology of constructing adaptive models and neuroinformatics. Algorithms of self-adaptation for neural networks intended for the construction of atmospheric models are given. Essentially, the developed algorithms are adaptive shells and can be easily transferred to other models.

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Держатели документа:
RAS, SB, Inst Biophys, Krasnoyarsk 660036, Russia
ИБФ СО РАН : 660036, Красноярск, Академгородок, д. 50, стр. 50

Доп.точки доступа:
Lankin, J.P.; Baskanova, T.F.; Matvienko, GG \ed.\; Matvie, o, GG \ed.\

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Fatty acid composition of Cladocera and Copepoda from lakes of contrasting temperature [Text] / M. I. Gladyshev [et al.] // Freshw. Biol. - 2015. - Vol. 60, Is. 2. - P373-386, DOI 10.1111/fwb.12499. - Cited References:88. - The work was supported by the project No. 6.1089.214/K of SiberianFederal University, carried out according to Federal Tasks of Ministryof Education and Science of Russian Federation, and partly supported bygrant of Russian Foundation for Basic Research (RFBR) No. 14-04-00087.We are grateful to Dr. G. Kirillin, Dr. H.-P. Grossart and Dr. P.Kasprzak for their kind help during sampling at Lake Stechlin and to Dr.M.A. Baturina for valuable assistance at Bolshezemelskaya tundra lakes. . - ISSN 0046-5070. - ISSN 1365-2427

РУБ Marine & Freshwater Biology
Рубрики:
FRESH-WATER ZOOPLANKTON
   SEASONAL DYNAMICS
   DAPHNIA-GALEATA
   TROPHIC
Кл.слова (ненормированные):
climate warming -- essential polyunsaturated fatty acids -- temperature -- adaptation -- zooplankton
Аннотация: We studied the fatty acid (FA) composition of six species of Cladocera and six species of Copepoda from five cold-water lakes, situated in the tundra and/or in the mountains, and eight species of Cladocera and four species of Copepoda from eight warm-water lakes (including one reservoir) in temperate regions. We asked whether the contrasting temperature would result primarily simply in changes in the percentages (i.e. percentage of total FAs) and absolute contents (quantities) of the long-chain polyunsaturated fatty acids (PUFAs), eicosapentaenoic acid (20:5n-3, EPA) and docosahexaenoic acid (22:6n-3, DHA), or whether there are other FAs with various number of double bonds and/or chain lengths which could be responsible for a putative homeoviscous adaptation. We also aimed to reveal any consistent phylogenetic differences in FA percentages and contents between Cladocera and Copepoda, separable from any temperature effects. Both taxa in warm waters had greater percentages of 18:0, and lower percentages of 14:0 and 18:4n-3, than in cold waters, but there were no differences in percentages of DHA. In addition, Cladocera, besides the lower percentage of EPA, had higher percentages of 20:0 and 22:0 in warm waters. These patterns in the percentages of 14:0, 18:0, 18:4n-3, 20:0 and 22:0 are in a good agreement with the hypothesis of homeoviscous adaptation. Thus, the role of EPA, and particularly DHA, as unique regulators of the homeoviscous adaptation of the zooplankton may have been overestimated. Overall, we confirmed the known differences between Cladocera and Copepoda, namely higher percentages of EPA in Cladocera and higher percentages of DHA in Copepoda. However, there was c.50% overlap in the ranges of the percentage of EPA in Cladocera and Copepoda, while the ranges in the content of EPA per unit organic carbon in Cladocera and Copepoda overlapped completely. Differences in the percentages and content of DHA between Cladocera and Copepoda were statistically significant and invariant with temperature, and therefore are probably due to phylogenetic factors, rather than any temperature adaptation. Contrasting temperature was not associated with significant differences in the contents of EPA and DHA per unit of organic carbon within the taxa studied. If this remained the case in a warming climate, such warming would be unlikely to reduce the accumulation of these important PUFAs in the zooplankton, at least if species composition was unchanged. However, if there were shifts in the proportions of Cladocera and Copepoda in the zooplankton, for example fewer copepods as temperature rises, a decrease of the flux of PUFA in the ecosystem is plausible, taking into account the phylogenetic (and temperature invariant) differences in DHA between the two groups.

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Держатели документа:
Russian Acad Sci, Inst Biophys, Siberian Branch, Krasnoyarsk, Russia.
Siberian Fed Univ, Krasnoyarsk, Russia.
Natl Acad Sci Belarus Bioresources, Sci & Pract Ctr, Minsk, Byelarus.
Russian Acad Sci, Inst Biol, Komi Sci Ctr, Ural Div, Syktyvkar, Russia.
Russian Acad Sci, AN Severtsov Inst Ecol & Evolut, Moscow, Russia.
ИБФ СО РАН

Доп.точки доступа:
Gladyshev, Michail I.; Sushchik, Nadezhda N.; Dubovskaya, Olga P.; Buseva, Zhanna F.; Makhutova, Olesia N.; Fefilova, Elena B.; Feniova, Irina Y.; Semenchenko, Vitaliy P.; Kolmakova, Anzhelika A.; Kalachova, Galina S.; Siberian Federal University [6.1089.214/K]; Russian Foundation for BasicResearch (RFBR) [14-04-00087]

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Genotoxicity assessment of low-level doses of gamma radiation with the SOS chromotest and the Ames test / A. Y. Bolsunovsky [et al.] // Doklad. Biochem. Biophys. - 2016. - Vol. 469, Is. 1. - P309-312, DOI 10.1134/S1607672916040190 . - ISSN 1607-6729
Аннотация: This is the first study to present data on the genotoxicity of low γ-irradiation doses for E. coli and S. typhimurium cells obtained using the SOS chromotest and the Ames test. The most pronounced effect was recorded in the first 24 h of γ-irradiation. After 72 h in the Ames test and after 96 h in the SOS chromotest, a significant effect of γ-irradiation on bacterial cells was detected. The absence of genotoxicity at the later stages can be explained by the adaptation of bacterial cells to the conditions of exposure. The findings allow the bacterial test system to be used for studying the effects of low doses at the early stages of exposure to radiation. © 2016, Pleiades Publishing, Ltd.

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Держатели документа:
Institute of Biophysics, Siberian Branch, Russian Academy of Sciences, Akademgorodok, Krasnoyarsk, Russian Federation
Institute of Cytology and Genetics, Siberian Branch, Russian Academy of Sciences, pr. Akademika Lavrent’eva 10, Novosibirsk, Russian Federation
Novosibirsk State University, ul. Pirogova 2, Novosibirsk, Russian Federation
Vorozhtsov Institute of Organic Chemistry, Siberian Branch, Russian Academy of Sciences, pr. Akademika Lavrent’eva 9, Novosibirsk, Russian Federation

Доп.точки доступа:
Bolsunovsky, A. Y.; Sinitsyna, O. I.; Frolova, T. S.; Vasyunina, E. A.; Dementyev, D. V.

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Maternal effects, conspecific chemical cues, and switching from parthenogenesis to gametogenesis in the cladoceran Moina macrocopa [Text] / Y. S. Zadereev // Aquat. Ecol. - 2003. - Vol. 37, Is. 3. - P. 251-255, DOI 10.1023/A:1025850417717. - Cited References: 19 . - ISSN 1386-2588

РУБ Ecology + Limnology + Marine & Freshwater Biology
Рубрики:
POPULATION-DENSITY
   DAPHNIA-MAGNA
   CRUSTACEA
   REPRODUCTION
   DIAPAUSE
Кл.слова (ненормированные):
adaptation -- Cladocera -- chemical signals -- gametogenesis induction -- maternal control
Аннотация: The change in reproductive mode from parthenogenesis to gametogenesis in Cladocera is controlled by multiple environmental cues. Maternal effects are involved in the control of reproductive switching. In this study, we estimated the readiness of Moina macrocopa females to change reproduction mode under the effect of conspecific chemicals on maternal and offspring generations. The results demonstrated that information about the chemical environment was not transmitted between generations (none of the females produced diapausing eggs in the control medium irrespective of their mothers' environment). Differences in maternal energetic investments were not significant, hence the maternal environment did not affect the fecundity. However, tested animals adapted to the effect of the diapause inducing factor. When offspring of mothers cultured in crowded water were also cultured in crowded water (the constant effect of conspecific chemicals), they switched less readily to gametogenesis than offsprings of mothers cultured in fresh medium.

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Держатели документа:
RAS, SB, Inst Biophys, Krasnoyarsk 660036, Russia
ИБФ СО РАН : 660036, Красноярск, Академгородок, д. 50, стр. 50

Доп.точки доступа:
Zadereev, Y.S.

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Salt-dependent inhibition of light emitting of the luminescent microorganism Escherichia coli Z9051 [Текст] / A. N. Boyandin, L. Y. Popova // Biofizika. - 2001. - Vol. 46, Is. 2. - P. 251-255. - Cited References: 12 . - ISSN 0006-3029

РУБ Biophysics

Кл.слова (ненормированные):
bacterial luminescence -- recombinant plasmid -- salt concentration
Аннотация: The influence of some mineral salts on the recombinant strain Escherichia coli Z9051 was investigated. It was shown that the composition (NaCl, Na2SO4, MgCl2 and MgSO4) and concentration (5 and 10%) of the salts substantially affect the expression of genes for the luminescence system of fight-emitting bacteria cloned in the plasmid under the control of the lac-promoter. In some cases, the luminescence level of the microorganism in the presence of salts was similar to the luminescence level under catabolite repression by glucose, the more strong influence of the salts exceeding the effect of catabolite repression. The possibility of adaptation of the genetically modified microorganism to the salinity factor is discussed.

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Держатели документа:
Russian Acad Sci, Inst Biophys, Siberian Branch, Krasnoyarsk 660036, Russia
ИБФ СО РАН : 660036, Красноярск, Академгородок, д. 50, стр. 50

Доп.точки доступа:
Boyandin, A.N.; Popova, L.Y.

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Population dynamics of transgenic microorganisms in the different microecosystem conditions [Text] / L. Y. Popova [et al.] ; ed. , AN Boyand // SPACE LIFE SCIENCES: CLOSED ECOLOGICAL SYSTEMS: EARTH AND SPACE APPLICATIONS. Ser. ADVANCES IN SPACE RESEARCH : ELSEVIER SCIENCE BV, 2001. - Vol. 27: F4 4 Symposium of COSPAR Scientific Commission F held at the 33rd COSPAR Scientific Assembly (JUL, 2000, WARSAW, POLAND), Is. 9. - P. 1571-1579, DOI 10.1016/S0273-1177(01)00248-4. - Cited References: 8 . - ISBN 0273-1177

РУБ Engineering, Aerospace + Astronomy & Astrophysics + Geosciences, Multidisciplinary + Meteorology & Atmospheric Sciences
Рубрики:
GENETICALLY-ENGINEERED MICROORGANISMS
Аннотация: The role of key environmental factors in adaptation of spore-forming and non-spore-forming transgenic microorganisms (TM) have been studied in model ecosystems. Model TM Escherichia coli Z905 (bearing plasmid genes of bacterial luminescence Ap(r)Lux(+)) has been found to have a higher adaptation potential than TM Bacillus subtilis 2335/105 (bearing genes of human alpha 2-interferon Km(r)lnf(+)), planned for employment as a living vaccine under varying environmental conditions. Effects of abiotic factors on migration of natural and recombinant plasmids between microorganisms under model ecosystem conditions has been estimated. The transgenic microorganisms with low copy number survived better under introduction conditions in the microcosms studied. This trend has been shown to be independent of the microcosm type and its complexity. (C) 2001 COSPAR. Published by Elsevier Science Ltd. All rights reserved.

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Держатели документа:
Russian Acad Sci, Siberian Branch, Inst Biophys, Krasnoyarsk 660036, Russia
ИБФ СО РАН : 660036, Красноярск, Академгородок, д. 50, стр. 50

Доп.точки доступа:
Popova, L.Y.; Lobova, T.I.; Krylova, T.Y.; Kargatova, T.V.; Maksimova, E.E.; Boyandin, A.N.; Pechurkin, N.S.; Boyand, , AN \ed.\

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Adaptive simulation of atmospheric phenomena [Text] / J. P. Lankin ; ed. GA Zherebtsov [et al.] // EIGHTH INTERNATIONAL SYMPOSIUM ON ATMOSPHERIC AND OCEAN OPTICS: ATMOSPHERIC PHYSICS. Ser. PROCEEDINGS OF THE SOCIETY OF PHOTO-OPTICAL INSTRUMENTATION ENGINEERS (SPIE) : SPIE-INT SOC OPTICAL ENGINEERING, 2002. - Vol. 4678: 8th International Symposium on Atmospheric and Ocean Optics - Atmospheric Physics (JUN 25-29, 2001, IRKUTSK, RUSSIA). - P. 668-679, DOI 10.1117/12.458507. - Cited References: 46 . - ISBN 0277-786X. - ISBN 0-8194-4433-2

РУБ Meteorology & Atmospheric Sciences + Optics + Spectroscopy

Кл.слова (ненормированные):
atmosphere -- system -- adaptation -- self-adaptation -- neuroinformatics
Аннотация: The paper describes scientific methodology of developing complex nonlinear dynamic models which form the basis of a new scientific trend called Stikhioniks(1) and are a efficient tool to devise atmosphere models. The model is aimed to develop complexly organized hierarchical non-equilibrium adaptive systems with a wide range of connections and elements and is a new step as related to the now dominant mechanical-statistical paradigm.

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Держатели документа:
Russian Acad Sci, Siberian Branch, Inst Biophys, Krasnoyarsk 660036, Russia
ИБФ СО РАН : 660036, Красноярск, Академгородок, д. 50, стр. 50

Доп.точки доступа:
Lankin, J.P.; Zherebtsov, GA \ed.\; Matvienko, GG \ed.\; Banakh, VA \ed.\; Banakh, \ed.\

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Salinity modulates thermotolerance, energy metabolism and stress response in amphipods Gammarus lacustris / K. P. Vereshchagina [et al.] // PeerJ. - 2016. - Vol. 2016, Is. 11, DOI 10.7717/peerj.2657 . - ISSN 2167-8359
Кл.слова (ненормированные):
Adaptation -- Amphipoda -- Gammarus lacustris -- Salinity -- Thermal tolerance
Аннотация: Temperature and salinity are important abiotic factors for aquatic invertebrates. We investigated the influence of different salinity regimes on thermotolerance, energy metabolism and cellular stress defense mechanisms in amphipods Gammarus lacustris Sars from two populations. We exposed amphipods to different thermal scenarios and determined their survival as well as activity of major antioxidant enzymes (peroxidase, catalase, glutathione S-transferase) and parameters of energy metabolism (content of glucose, glycogen, ATP, ADP, AMP and lactate). Amphipods from a freshwater population were more sensitive to the thermal challenge, showing higher mortality during acute and gradual temperature change compared to their counterparts from a saline lake. A more thermotolerant population from a saline lake had high activity of antioxidant enzymes. The energy limitations of the freshwater population (indicated by low baseline glucose levels, downward shift of the critical temperature of aerobic metabolism and inability to maintain steady-state ATP levels during warming) was ob- served, possibly reflecting a trade-off between the energy demands for osmoregulation under the hypo-osmotic condition of a freshwater environment and protection against temperature stress. © 2016 Vereshchagina et al.

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Держатели документа:
Institute of Biology, Irkutsk State University, Irkutsk, Russian Federation
Baikal Research Centre, Irkutsk, Russian Federation
Institute of Biophysics SB RAS, Krasnoyarsk, Russian Federation
Siberian Federal University, Krasnoyarsk, Russian Federation
Institute for Biological Sciences, University of Rostock, Rostock, Germany

Доп.точки доступа:
Vereshchagina, K. P.; Lubyaga, Y. A.; Shatilina, Z.; Bedulina, D.; Gurkov, A.; Axenov-Gribanov, D. V.; Baduev, B.; Kondrateva, E. S.; Gubanov, M.; Zadereev, E.; Sokolova, I.; Timofeyev, M.

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Pine stands as bioindicators: Justification for air toxicity monitoring in an industrial metropolis / G. Polyakova, N. Pashenova, V. Senashova [et al.] // Environ. - MDPI. - 2020. - Vol. 7, Is. 4. - Ст. 28, DOI 10.3390/environments7040028 . - ISSN 2076-3298
Кл.слова (ненормированные):
Bioindicators -- Creeping fire -- Environmental monitoring -- High-grade pine stands -- Pollutants -- Toxicity
Аннотация: Five permanent sample plots (SPs; 200-250 trees per plot) were established in middleaged high-grade suburban pine stands near the industrial city of Krasnoyarsk, Siberia, Russia. Needle damage, inventory parameters of the stands, and the defense response of the stem phloem were evaluated annually for the years 2002-2019 and attributed to acute or chronic toxic exposures (creeping fire or industrial pollutants, respectively). The results form a basis for using trees as bioindicators. A newly elaborated stem lesion test was formed from a hypothesis on the upward sugar transport for the regeneration of an injured crown, based on Eschrich‘s model of bidirectional sugar transport in the phloem. The formation of a phloem lesion was induced by inoculation of the stem with a mycelial extract of the ophiostomatoid fungus Ceratocystis laricicola. The lesion length and its shift relative to the inoculation hole were measured. An increase in the length of needles at early stages of stand weakening by pollutants was found to correspond to the hormesis model (Selye‘s adaptation syndrome). A possibility of assessing the chronology of pollutant toxicity and the duration of the recovery period after creeping fire was shown. © 2020 by the authors.

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Держатели документа:
Sukachev Institute of Forest SB RAS, FRC KSC SB RAS, Krasnoyarsk, 660036, Russian Federation
Non-State Educational Institution of Higher Professional Education Siberian Institute of Business, Management and Psychology, Krasnoyarsk, 660069, Russian Federation
Photobiology Lab, Institute of Biophysics SB RAS, FRC KSC SB RAS, Krasnoyarsk, 660036, Russian Federation
Biophysics Department, Siberian Federal University, Krasnoyarsk, 660049, Russian Federation

Доп.точки доступа:
Polyakova, G.; Pashenova, N.; Senashova, V.; Podolyak, N.; Kudryasheva, N.

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10.

The effect of salinity on the grazing rate and survival of Daphnia magna females adapted to different salinities / E. S. Zadereev, T. S. Lopatina, S. D. Ovchinnikov [et al.] // Aquat. Ecol. - 2022, DOI 10.1007/s10452-021-09941-7. - Cited References:47. - The reported study was funded by the Krasnoyarsk Regional Fund for supporting scientific and technical activities, the Krasnoyarsk Krai Government and the Russian Foundation for Basic Research, project number 19-44-240010. We are grateful to professional English translator Elena Krasova for language corrections. . - Article in press. - ISSN 1386-2588. - ISSN 1573-5125

РУБ Ecology + Limnology + Marine & Freshwater Biology
Рубрики:
FEEDING-BEHAVIOR
PHYTOPLANKTON CONTROL
SPECIES COMPOSITION
Кл.слова (ненормированные):
Salinity -- Grazing -- Phytoplankton -- Adaptation -- Daphnia
Аннотация: The cladoceran Daphnia magna inhabits lakes with salinities up to 10 g L-1. We compared the effects of different salinities (up to 9 g L-1) on the survival, specific grazing rate, and size selective feeding of Daphnia females adapted to fresh or saline waters (3-4 g L-1). The freshwater population was more sensitive to high salinity (LC50 = 5.3 g L-1), while the survival of the saline water population also decreased in fresh water. Freshwater population demonstrated a higher grazing rate in fresh water, while the saline water population had a higher grazing rate at the salinity above 3 g L-1. A decrease in the grazing rate of the freshwater population was observed at the salinity above 4-5 g L-1. Populations differed in food selectivity. The saline water population consumed particles of larger sizes than the freshwater population. The average size of phytoplankton particles grazed in fresh water was larger than in saline water. This size selective salinity-dependent grazing may be related to the dependence of the feeding efficiency of cladocerans on the viscosity of water and size of phytoplankton particles. Our results indicate that Daphnia populations adapted to a certain salinity can temporarily lose the ability to control phytoplankton because of salinity fluctuations.

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Держатели документа:
Russian Acad Sci, Fed Res Ctr, Krasnoyarsk Sci Ctr, Inst Biophys, 50-50 Akademgorodok, Krasnoyarsk 660036, Russia.
Siberian Fed Univ, 79 Svobodniy Ave, Krasnoyarsk 660041, Russia.
Khakassky State Nat Reserve, POB 189, Abakan 655017, Russia.

Доп.точки доступа:
Zadereev, E. S.; Lopatina, T. S.; Ovchinnikov, S. D.; Oskina, N. A.; Drobotov, A., V; Tolomeev, A. P.; Krasnoyarsk Regional Fund; Krasnoyarsk Krai Government; Russian Foundation for Basic ResearchRussian Foundation for Basic Research (RFBR) [19-44-240010]

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11.

Adaptation of a Bacterial Bioluminescent Assay to Monitor Bioeffects of Gold Nanoparticles / M. R. Yehia, T. E. Smolyarova, A. V. Shabanov [et al.] // Bioengineering-Basel. - 2022. - Vol. 9, Is. 2. - Ст. 61, DOI 10.3390/bioengineering9020061. - Cited References:91 . - ISSN 2306-5354

РУБ Biotechnology & Applied Microbiology + Engineering, Biomedical

Кл.слова (ненормированные):
gold nanoparticles -- luminous marine bacteria -- bioassay -- hormesis -- tritium -- reactive oxygen species
Аннотация: Our current study aimed to adapt a bioluminescent bacteria-based bioassay to monitor the bioeffects of gold nanoparticles (AuNPs). Luminous marine bacteria Photobacterium phosphoreum and AuNPs modified with polyvinylpyrrolidone were employed; low-concentration (<= 10(-3) g/L) bioeffects of AuNPs were studied. Bioluminescence intensity was used as an indicator of physiological activity in bacteria. Two additional methods were used: reactive oxygen species (ROS) content was estimated with a chemiluminescent luminol method, and bacterial size was monitored using electron microscopy. The bacterial bioluminescent response to AuNPs corresponded to the "hormesis" model and involved time-dependent bioluminescence activation, as well as a pronounced increase in the number of enlarged bacteria. We found negative correlations between the time courses of bioluminescence and the ROS content in bacterial suspensions, demonstrating the relationship between bioluminescence activation and bacterial ROS consumption. The combined effects of AuNPs and a beta-emitting radionuclide, tritium, revealed suppression of bacterial bioluminescent activity (as compared to their individual effects) and a reduced percentage of enlarged bacteria. Therefore, we demonstrated that our bacteria-based bioluminescence assay is an appropriate tool to study the bioeffects of AuNPs; the bioeffects can be further classified within a unified framework for rapid bioassessment.

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Держатели документа:
Siberian Fed Univ, Biophys Dept, Krasnoyarsk 660041, Russia.
RAS, Inst Phys SB, Fed Res Ctr, Krasnoyarsk Sci Ctr SB RAS, Krasnoyarsk 660036, Russia.
RAS, Inst Biophys SB, Fed Res Ctr, Krasnoyarsk Sci Ctr SB RAS, Krasnoyarsk 660036, Russia.
Moscow MV Lomonosov State Univ, Dept Chem, Moscow 119991, Russia.

Доп.точки доступа:
Yehia, Moustafa R.; Smolyarova, Tatyana E.; Shabanov, Alexandr V.; Sushko, Ekaterina S.; Badun, Gennady A.; Kudryasheva, Nadezhda S.; Badun, Gennadii

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12.

Pine Stands as Bioindicators: Justification for Air Toxicity Monitoring in an Industrial Metropolis / G. Polyakova, N. Pashenova, V. Senashova [et al.] // Environments. - 2020. - Vol. 7, Is. 4. - Ст. 28, DOI 10.3390/environments7040028. - Cited References:35. - This work was supported by the state budget allocated to the fundamental research at the Russian Academy of Sciences, projects 0356-2018-0742 and 0356-2017-0017, and by RFBR grant 15-04-06575, RFBR-Krasnoyarsk Regional Foundation N 18-44-240004, grant 18-44-242002. . - ISSN 2076-3298

РУБ Environmental Sciences
Рубрики:
HORMESIS
Кл.слова (ненормированные):
environmental monitoring -- pollutants -- toxicity -- creeping fire -- high-grade pine stands -- bioindicators
Аннотация: Five permanent sample plots (SPs; 200-250 trees per plot) were established in middle-aged high-grade suburban pine stands near the industrial city of Krasnoyarsk, Siberia, Russia. Needle damage, inventory parameters of the stands, and the defense response of the stem phloem were evaluated annually for the years 2002-2019 and attributed to acute or chronic toxic exposures (creeping fire or industrial pollutants, respectively). The results form a basis for using trees as bioindicators. A newly elaborated stem lesion test was formed from a hypothesis on the upward sugar transport for the regeneration of an injured crown, based on Eschrich's model of bidirectional sugar transport in the phloem. The formation of a phloem lesion was induced by inoculation of the stem with a mycelial extract of the ophiostomatoid fungus Ceratocystis laricicola. The lesion length and its shift relative to the inoculation hole were measured. An increase in the length of needles at early stages of stand weakening by pollutants was found to correspond to the hormesis model (Selye's adaptation syndrome). A possibility of assessing the chronology of pollutant toxicity and the duration of the recovery period after creeping fire was shown.

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Держатели документа:
FRC KSC SB RAS, Sukachev Inst Forest SB RAS, Krasnoyarsk 660036, Russia.
Nonstate Educ Inst Higher Profess Educ Siberian I, Krasnoyarsk 660069, Russia.
FRC KSC SB RAS, Photobiol Lab, Inst Biophys SB RAS, Krasnoyarsk 660036, Russia.
Siberian Fed Univ, Biophys Dept, Krasnoyarsk 660049, Russia.

Доп.точки доступа:
Polyakova, Galina; Pashenova, Natalia; Senashova, Vera; Podolyak, Natalia; Kudryasheva, Nadezhda; Russian Academy of SciencesRussian Academy of Sciences [0356-2018-0742, 0356-2017-0017]; RFBRRussian Foundation for Basic Research (RFBR) [15-04-06575]; RFBR-Krasnoyarsk Regional Foundation [18-44-240004, 18-44-242002]

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13.

The novel extremely psychrophilic luciferase from Metridia longa: Properties of a high-purity protein produced in insect cells / M. D. Larionova, S. V. Markova, E. S. Vysotski // Biochem. Biophys. Res. Commun. - 2017. - Vol. 483, Is. 1. - P772-778, DOI 10.1016/j.bbrc.2016.12.067. - Cited References:24. - The cloning of cDNAs encoding MLuc2 isoforms of M. longa was supported by Bayer AG (Germany) and the state budget allocated to the fundamental research at the Russian Academy of Sciences (project No. 01201351504); all other studies were funded by RFBR and Government of Krasnoyarsk Territory according to the research project No. 16-44-242099. . - ISSN 0006-291X. - ISSN 1090-2104

РУБ Biochemistry & Molecular Biology + Biophysics
Рубрики:
CDNA CLONING
EXPRESSION
ENZYME
Кл.слова (ненормированные):
Bioluminescence -- Coelenterazine -- Bioluminescent reporter -- Psychrophilic -- enzyme -- Molecular adaptation
Аннотация: The bright bioluminescence of copepod Metridia longa is conditioned by a small secreted coelenterazinedependent luciferase (MLuc). To date, three isoforms of MLuc differing in length, sequences, and some properties were cloned and successfully applied as high sensitive bioluminescent reporters. In this work, we report cloning of a novel group of genes from M. longa encoding extremely psychrophilic isoforms of MLuc (MLuc2-type). The novel isoforms share only similar to 54-64% of protein sequence identity with the previously cloned isoforms and, consequently, are the product of a separate group of paralogous genes. The MLuc2 isoform with consensus sequence was produced as a natively folded protein using baculovirus/ insect cell expression system, purified, and characterized. The MLuc2 displays a very high bioluminescent activity and high thermostability similar to those of the previously characterized M. longa luciferase isoform MLuc7. However, in contrast to MLuc7 revealing the highest activity at 12-17 degrees C and 0.5 M NaCl, the bioluminescence optima of MLuc2 isoforms are at similar to 5 degrees C and 1 M NaCl. The MLuc(2) adaptation to cold is also accompanied by decrease of melting temperature and affinity to substrate suggesting a more conformational flexibility of a protein structure. The luciferase isoforms with different temperature optima may provide adaptability of the M. longa bioluminescence to the changes of water temperature during diurnal vertical migrations. (C) 2016 Elsevier Inc. All rights reserved.

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Держатели документа:
Fed Res Ctr Krasnoyarsk Sci Ctr SB RAS, Inst Biophys SB RAS, Photobiol Lab, Krasnoyarsk, Russia.
Siberian Fed Univ, Krasnoyarsk, Russia.

Доп.точки доступа:
Larionova, Marina D.; Markova, Svetlana V.; Vysotski, Eugene S.; Bayer AG (Germany); Russian Academy of Sciences [01201351504]; RFBR; Government of Krasnoyarsk Territory [16-44-242099]

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14.

Meta-analysis of factors associated with omega-3 fatty acid contents of wild fish / M. I. Gladyshev [et al.] // Rev. Fish. Biol. Fish. - 2018. - Vol. 28, Is. 2. - P277-299, DOI 10.1007/s11160-017-9511-0. - Cited References:138. - The work was supported by a Russian Science Foundation Grant (No. 16-14-10001). . - ISSN 0960-3166. - ISSN 1573-5184

РУБ Fisheries + Marine & Freshwater Biology
Рубрики:
FATTY-ACID-COMPOSITION
DIETARY DOCOSAHEXAENOIC ACID
LONG-CHAIN
Кл.слова (ненормированные):
Docosahexaenoic acid -- Ecomorphological factors -- Eicosapentaenoic acid -- Nutritive value -- Phylogenetic factors
Аннотация: Fish are recognized as the main source of physiologically important omega-3 long-chain polyunsaturated fatty acids, namely, eicosapentaenoic acid (EPA) and docosahexaenoic acid (DHA), for human nutrition. However, muscle tissue contents of these fatty acids in diverse fish species, i.e., their nutritive value for humans, varied within two orders of magnitude. We reviewed contents of EPA and DHA, measured by similar methods using an internal standard during chromatography as mg per g of wet mass in 172 fish species belonging to 16 orders, to evaluate probable variations in phylogenetic and ecological drivers. EPA + DHA content varied from 25.6 mg g(-1) of wet mass (Sardinops sagax) to 0.12 mg g(-1) (Gymnura spp.). Multidimensional redundancy analysis revealed that among phylogenetic, ecomorphological and abiotic environmental factors, the highest proportion of variation contribution belonged to the shared contribution of sets of phylogenetic and ecomorphological factors. Specifically, the highest values of EPA + DHA content were characteristic of fish belonging to the orders Clupeiformes or Salmoniformes, were pelagic fast swimmers, ate zooplankton and inhabited marine waters or migrated from fresh to marine waters (anadromous migrations). High EPA and DHA content in muscle tissues of the above species appeared to be a metabolic adaptation for fast continuous swimming. In contrast to common beliefs, our meta-analysis did not support the significant influence of higher trophic levels (piscivory) and cold environments (homeoviscous adaptation) on EPA and DHA content in fish. However, many causes of high and low levels of physiologically important fatty acids in certain fish species remained unexplained and require evaluation in future studies.

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Держатели документа:
Russian Acad Sci, Fed Res Ctr, Krasnoyarsk Sci Ctr, Inst Biophys,Siberian Branch, Krasnoyarsk 660036, Russia.
Siberian Fed Univ, Svobodny Av 79, Krasnoyarsk 660041, Russia.
Russian Acad Sci, AN Severtsov Inst Ecol & Evolut, Leninsky Prospect 33, Moscow 119071, Russia.
Lomonosov Moscow State Univ, Moscow 119899, Russia.

Доп.точки доступа:
Gladyshev, Michail I.; Sushchik, Nadezhda N.; Tolomeev, Alexander P.; Dgebuadze, Yury Yu; Russian Science Foundation [16-14-10001]

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15.

Modeling production processes in forest stands: An adaptation of the Solow growth model / V. Soukhovolsky, Y. Ivanova // Forests. - 2018. - Vol. 9, Is. 7, DOI 10.3390/f9070391 . - ISSN 1999-4907
Кл.слова (ненормированные):
Components of phytomass -- Forest stands -- Modeling of growth processes -- Net primary production (NPP) -- Economics -- Needles -- Energy productions -- Forest stand -- Growth process -- Independent model -- Model of economics -- Net primary production -- Phytomass -- Production process -- Forestry -- Hexapoda
Аннотация: The model of forest stand growth proposed in this study is based on R. Solow's model of economic growth. The variables introduced into the model are the "capital" (the phytomass of the non-synthesizing tree components in the stand-the stem, roots, and branches) and the "labor" (the phytomass of the photosynthesizing tree components in the stand-leaves or needles). Root phytomass is calculated with a special independent model. The process of energy production by the trees is described with the Cobb-Douglas equation. The proposed approach is used to describe growth processes in the forest stands comprising various species in Siberia and the age dynamics of net primary production. The model can explain a number of effects (such as death of the forest stand after the needles have been consumed by defoliating insects) that cannot be explained by standard logistic models. © 2018 by the authors.

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Держатели документа:
Sukachev Institute of Forest SB RAS, Federal Research Center 'Krasnoyarsk Science Center SB RAS', Akademgorodok 50-28, Krasnoyarsk, Russian Federation
Institute of Biophysics SB RAS, Federal Research Center 'Krasnoyarsk Science Center SB RAS', Akademgorodok 50-50, Krasnoyarsk, Russian Federation

Доп.точки доступа:
Soukhovolsky, V.; Ivanova, Y.

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16.

A study on the possibility of environmental adaptation of a Bacillus subtilis strain containing a recombinant plasmid with the gene of human interferon alpha 2 [Text] / L. Y. Popova [et al.] // Microbiology. - 1997. - Vol. 66, Is. 6. - P. 637-641. - Cited References: 13 . - ISSN 0026-2617

РУБ Microbiology
Рубрики:
GENETICALLY-MODIFIED MICROORGANISMS
Кл.слова (ненормированные):
microecosystem -- Bacillus subtilis -- recombinant plasmid -- interferon -- adaptation
Аннотация: Adaptation of the Bacillus subtilis strain 2335/105 (Km(r)Inf(+)) containing a recombinant plasmid encoding the extracellular human interferon alpha 2 was studied under various conditions. Stability of the plasmid in the population of B. subtilis 2335/105 was estimated under nonselective conditions. The plasmid-free cells and cells with a low number of plasmid copies were found to accumulate progressively, constituting 80% of the population after 10 culture passages, indicating the poor competitiveness of cells carrying a high number of plasmid copies. The behavior of vegetative cells of the recombinant strain introduced into aquatic microcosms differing in trophic chain length was studied. Within the first 10 days, the lysis of vegetative cells of B. subtilis 2335/105 occurred; the number of viable spores was very low but remained constant for half a year.

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Держатели документа:
Russian Acad Sci, Akademgorodok, Inst Biophys, Siberian Div, Krasnoyarsk 660036, Russia
State Sci Ctr VB Vektor, Sci Res Design & Technol Inst Biol Act Subst, Berdsk 633190, Russia
ИБФ СО РАН : 660036, Красноярск, Академгородок, д. 50, стр. 50

Доп.точки доступа:
Popova, L.Y.; Kargatova, T.V.; Maksimova, E.E.; Belyavskaya, V.A.

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17.

An ontogenetic approach to the assessment of plant resistance to stress factors based on the method of chlorophyll fluorescence induction. / T. V. Nesterenko, A. A. Tikhomirov // Doklady. Biochemistry and biophysics. - 2003. - Vol. 388. - P4-7 . - ISSN 1607-6729
Кл.слова (ненормированные):
chlorophyll -- adaptation -- aging -- article -- comparative study -- cucumber -- light -- metabolism -- methodology -- photostimulation -- photosynthesis -- physiology -- plant leaf -- radiation dose -- radiation exposure -- spectrofluorometry -- Adaptation, Physiological -- Aging -- Chlorophyll -- Cucumis sativus -- Light -- Photic Stimulation -- Photosynthetic Reaction Center Complex Proteins -- Plant Leaves -- Radiation Dosage -- Spectrometry, Fluorescence

Scopus
Держатели документа:
Institute of Biophysics, Siberian Division, Russian Academy of Sciences, Akademgorodok, Krasnoyarsk, 660036 Russia. : 660036, Красноярск, Академгородок, д. 50, стр. 50

Доп.точки доступа:
Nesterenko, T.V.; Tikhomirov, A.A.

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18.

Tolerance of LSS plant component to elevated temperatures / S. A. Ushakova, A. A. Tikhomirov // Acta Astronautica. - 2002. - Vol. 50, Is. 12. - P759-764, DOI 10.1016/S0094-5765(02)00010-3 . - ISSN 0094-5765
Кл.слова (ненормированные):
Metabolism -- Photosynthesis -- Rate constants -- Thermal effects -- Thermoanalysis -- Thermal tolerance -- Life support systems (spacecraft) -- carbon dioxide -- adaptation -- article -- Brassicaceae -- comparative study -- heat -- instrumentation -- light -- metabolism -- microclimate -- photosynthesis -- physiology -- plant physiology -- wheat -- Adaptation, Physiological -- Brassicaceae -- Carbon Dioxide -- Ecological Systems, Closed -- Heat -- Life Support Systems -- Light -- Photosynthesis -- Plant Physiology -- Triticum
Аннотация: Stability of LSS based on biological regeneration of water, air and food subject to damaging factors is largely dependent on the behavior of the photosynthesizing component represented, mainly, by higher plants. The purpose of this study is to evaluate the tolerance of uneven-aged wheat and radish cenoses to temperature effects different in time and value. Estimation of thermal tolerance of plants demonstrated that exposure for 20 h to the temperature increasing to 45В°C brought about irreversible damage both in photosynthetic processes (up to 80% of initial value) and the processes of growth and development. Kinetics of visible photosynthesis during exposure to elevated temperatures can be used to evaluate critical exposure time within the range of which the damage of metabolic processes is reversible. With varying light intensity and air temperature it is possible to find a time period admissible for the plants to stay under adverse conditions without considerable damage of metabolic processes. В© 2002 Elsevier Science Ltd. All rights reserved.

Scopus
Держатели документа:
Institute of Biophysics (Russian Academy of Sciences, Siberian Branch) Academgorodok, 660036 Krasnoyarsk, Russian Federation : 660036, Красноярск, Академгородок, д. 50, стр. 50

Доп.точки доступа:
Ushakova, S.A.; Tikhomirov, A.A.

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19.

Photosynthesis and respiration in plants grown under red and white light / S. A. Ushakova [et al.] // Russian Journal of Plant Physiology. - 1997. - Vol. 44, Is. 3. - P317-321 . - ISSN 1021-4437
Кл.слова (ненормированные):
Cucumis sativus -- Dark respiration -- Helianthus annuus -- Line-structured spectrum -- Lycopersicon esculentum -- Photosynthesis -- Plant resistance -- Red light -- Respiration in light
Аннотация: Tomato (Lycopersicon esculentum Mill), sunflower (Helianthus annuus L.), and cucumber (Cucumis sativus L.) plants were grown under red or white light at a radiance of 115 W/m2 under controlled conditions. The red spectra were characterized by either two well-distinguished spectral lines (RL1) or only one (RL2). Apparent photosynthesis (Pa), gross photosynthesis (Pg), dark (Rd), and light (R1) respiration, the content of pigments, and the biochemical composition of plants were estimated. Enhancing the destructive red light influence led to a rise in the Pa/R1 and Pa/Pg ratios and to a decrease in chlorophyll a, nitrate, and reduced nitrogen. RL1 was more inhibitory for plants than RL2. It is concluded that declined energy efficiency of respiration contributes to the destructive effect of RL in sunflower and cucumber plants. The rearrangement of metabolic processes, at which energy efficiency of respiration is maintained, is responsible for adaptation of tomato plants to red light. The obtained results allow one to outline the ways to study the species-specific mechanisms of plant responses to prolonged RL action.

Scopus
Держатели документа:
Institute of Biophysics, Siberian Division, Russian Academy of Sciences, Krasnoyarsk, 660036, Russian Federation : 660036, Красноярск, Академгородок, д. 50, стр. 50

Доп.точки доступа:
Ushakova, S.A.; Tikhomirov, A.A.; Volkova, E.K.; Alekhina, E.B.; Zavorueva, E.N.

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20.

Chlorophyll fluorescence induction and estimation of plant resistance to stress factors / T. V. Nesterenko, A. A. Tikhomirov, V. N. Shikhov // Zhurnal Obshchei Biologii. - 2007. - Vol. 68, Is. 6. - С. 444-458 . - ISSN 0044-4596
Кл.слова (ненормированные):
chlorophyll -- adaptation -- cucumber -- fluorescence -- growth, development and aging -- metabolism -- physiology -- plant leaf -- review -- Adaptation, Physiological -- Chlorophyll -- Cucumis sativus -- Fluorescence -- Plant Leaves -- Cucumis sativus
Аннотация: The usage of chlorophyll fluorescence induction (CFI) for estimating various types of plant resistance (primary, general, initial, adaptive) to stress factors is reviewed. The necessity of ontogenetic approach (considering the age-specific properties of the photosynthetic apparatus) in determining general and adaptive resistance of plants to prolonged action of stress factors by the CFI method is argued. In the plant Cucumbis sativus L., the possibility is shown of using age-specific qualitative and quantitative traits of leaf CFI (changes in the shape of chlorophyll fluorescence induction curves and in the dynamics of CFI parameters in the course of leaf ontogeny) for comparative study of differences between fully active and stressed plants. Possible criteria are suggested for estimating the effect of outer stress factors by the presence or absence of a steady-state phase in the dynamics of CFI parameters during leaf ontogeny. It is also suggested to use the duration of the steady-state phase following the termination of leaf growth (estimated by the dynamics of the slow phase of CFI as the ratio of fluorescence intensity at the peak P and the steady-state fluorescence intensity, FP/FS, or as the viability index Rfd) and the variability of CFI parameters during this period as qualitative estimates of plant resistance to prolonged action of stress factors.

Scopus
Держатели документа:
Institute of Biophysics, Siberian Branch of Russian Academy of Sciences, Akademgorodok, Krasnoyarsk 660036, Russian Federation : 660036, Красноярск, Академгородок, д. 50, стр. 50

Доп.точки доступа:
Nesterenko, T.V.; Tikhomirov, A.A.; Shikhov, V.N.

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