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^a621.99.29^2VINITI
П 86

Психрофильные и психротолерантные гетеротрофные микроорганизмы карстовых полостей Средней Сибири [Текст] : научное издание / С. В. Хижняк [и др.] // Экология. - 2003. - N 4. - С. 261-266 . - ISSN 0367-0597

ГРНТИ

62.99.29

РУБ 621.99.29
Рубрики:
ПСИХРОФИЛЬНЫЕ МИКРООРГАНИЗМЫ
   ПСИХРОТОЛЕРАНТНЫЕ МИКРООРГАНИЗМЫ
   ЧИСЛЕННОСТЬ
   ИДЕНТИФИКАЦИЯ
   ПОДЗЕМНЫЕ ЭКОСИСТЕМЫ
   ПЕЩЕРЫ
Аннотация: Исследовали естественную микрофлору карстовых полостей Средней Сибири, представленную психрофильными и психротолерантными бактериями и грибами, способными к росту при т-ре +3...+15'ГРАДУС'C и +3...+28'ГРАДУС'C соответственно. Бактерии в пещерах распространены повсеместно, их численность колеблется от 10{3} до 10{7} клеток/г грунта. Идентификация показала наличие родов Pseudomonas, Arthrobacter, Bacillus и коринебактерий. Грибы встречаются в местах с повышенной антропогенной нагрузкой, их численность достигает 10{6}-10{7} колониеобразующих единиц/г грунта. Среди грибов доминируют представители родов Mucor, Penicillium, Chrysosporium. Россия, Красноярский гос. аграрный ун-т, Красноярск. Библ. 12
: 660036, Красноярск, Академгородок, д. 50, стр. 50

Доп.точки доступа:
Хижняк, С.В.; Таушева, И.В.; Березикова, А.А.; Нестеренко, Е.В.; Рогозин, Д.Ю.

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^a621.01.94^2VINITI
Б 86

Бояндин, А. Н.
Плазмидсодержащий и бесплазмидный штаммы Bacillus subtilis при изменении источников углеродного питания [Текст] : научное издание / А. Н. Бояндин, Л. Ю. Попова, Н. С. Печуркин // Биотехнология. - 2000. - N 4. - С. 40-44 . - ISSN 0234-2758

ГРНТИ

62.01.94

РУБ 621.01.94
Рубрики:
BACILLUS SUBTILIS (BACT)
   ПЛАЗМИДСОДЕРЖАЩИЙ ШТАММ
   БЕСПЛАЗМИДНЫЙ ШТАММ
   РОСТОВЫЕ ХАРАКТЕРИСТИКИ
   СРАВНИТЕЛЬНЫЙ АНАЛИЗ
   СМЕНА ИСТОЧНИКОВ УГЛЕРОДА
   ВАКЦИНЫ
   ГЕН 'АЛЬФА'-ИНТЕРФЕРОНА
   ПРОБИОТИКИ
   ОХРАНА ОКРУЖАЮЩЕЙ СРЕДЫ
Аннотация: В данной работе оценивалась способность к росту бесплазмидного и рекомбинантного штаммов Bacillus subtilis в зависимости от изменения источника углеродного питания. Штамм B. subtilis 2335/105, содержащий рекомбинантную плазмиду с клонированными под контролем конститутивного промотора генами 'альфа'-2-интерферона человека, вместе с бесплазмидным штаммом B. subtilis 2335 входит в состав пробиотического препарата "Субалин" и планируется для использования в животноводстве и ветеринарии в качестве лечебно-профилактического (антивирусного и антибактериального) средства, что делает необходимым работы как по повышению эффективности препарата, так и по оценке риска последствий его использования для природных экосистем. Бесплазмидный штамм проявлял значительно лучший рост, чем генетически модифицированный, при выращивании на глюкозной и глицериновой средах, а также после пересева с них. На среде с пептоном не наблюдалось существенных различий между штаммами по данному признаку. Наличие пептона в среде способствует устойчивости микроорганизмов к повышенной конц-ии (5%) хлорида натрия. Рассматриваются условия доминирования бесплазмидного или плазмидсодержащего штаммов. Россия, Ин-т биофизики СО РАН, Красноярск, Академгородок, 660036. Библ. 6
: 660036, Красноярск, Академгородок, д. 50, стр. 50

Доп.точки доступа:
Попова, Л.Ю.; Печуркин, Н.С.

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^a341.27.21.09.02^2VINITI
И 39

Изучение гетерогенности в популяциях плазмидсодержащего и бесплазмидного штаммов Bacillus subtilis в разных условиях существования [Текст] : научное издание / Т. Ю. Крылова [и др.] // Микробиология. - 2000. - Т. 69, N 2. - С. 270-275 . - ISSN 0026-3656

ГРНТИ

34.27.21

РУБ 341.27.21.09.02
Рубрики:
ПОПУЛЯЦИИ
   РЕКОМБИНАНТНЫЕ
   БЕСПЛАЗМИДНЫЕ
   ГЕТЕРОГЕННОСТЬ
   ВОДНЫЕ МИКРОКОСМЫ
   РАЗНЫЕ УСЛОВИЯ СУЩЕСТВОВАНИЯ
   BACILLUS SUBTILIS (BACT.)
   ШТАММ L335
Аннотация: Проведено сравнение гетерогенности популяций рекомбинантного и бесплазмидного штаммов Bacillus subtilis при интродукции в водные микрокосмы. Бесплазмидный штамм B. subtilis 2335 сохранялся как в форме вегетативных клеток, так и в форме спор, рекомбинантный штамм B. subtilis 2335/105 (Km{r}Inf{+}) - преимущественно в форме спор. У "споровых" изолятов рекомбинантного штамма отмечали сохранение исходной копийности плазмиды, а у "вегетативных" изолятов - снижение исходной копийности. У изолятов B. subtilis 2335/105, полученных из микрокосмов, и вариантов, полученных после 10 последовательных пассажей (среды М9 и 0.1*М9 с Km и без Km), отмечали изменения по копийности, устойчивости к Km и максимальному приросту биомассы в зависимости от условий выделения. На среде М9 (независимо от присутствия Km) у 50 и более процентов вариантов наблюдали снижение копийности. На 0.1*М9 - около 70% на среде с Km и 90% вариантов на среде без Km сохраняли исходную копийность, что в основном коррелировало с устойчивостью к Km. У всех вариантов, выделенных со сред с Km, наблюдали сохранение исходного максимального прироста биомассы. У 70 и более процентов вариантов, выделенных со сред без Km, отмечали увеличение прироста биомассы. Россия, Ин-т биофизики СО РАН, КрасноярскU
: 660036, Красноярск, Академгородок, д. 50, стр. 50

Доп.точки доступа:
Крылова, Т.Ю.; Попова, Л.Ю.; Печуркин, Н.С.; Кашперова, Т.А.; Белявская, В.А.

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Wheat growth on neutral and soil-like substrates: Carbon dioxide exchange and microflora / J. -B. Gros [et al.] // Acta Horticulturae. - 2004. - Vol. 644. - P243-248
Кл.слова (ненормированные):
Carbon dioxide -- Closed ecological system
Аннотация: The soil-like substrate (SLS), which is a potential candidate for employment in closed ecological systems, has been tested. CO2 exchange, composition and numbers of soil microflora have been examined in .wheat-SLS. system. The results produced have been compared to analogous characteristics of .wheat-neutral substrate. system. A hydroponic method was used under wheat growing on the neutral substrate (expanded clay aggregate). Plants for both studies were grown in closed environment from seed to physiological maturity. In the .wheat-SLS. system, the net photosynthetic rate of canopy was positive in the course of 6.55 days after planting. The net photosynthetic rate of canopy in .wheat-neutral substrate. system was positive in the entire course of vegetation. According to calculations in the course of vegetation, photosynthesis has withdrawn 3.28 kg m-2 CO2 from the .wheat-SLS. system and 3.40 kg m-2 CO2 from the .wheat-neutral substrate. system. On the SLS dominant among bacteria were the spore-forming bacteria from Bacillus genus, among fungi . from Trichoderma genus. In the hydroponic cultivation on neutral substrate dominant were bacteria from Pseudomonas genus, most commonly found fungi were species from Fusarium and Botrytis genera.

Scopus
Держатели документа:
LGCB, Universte B. Pascal, BP206, FR-63174 Aubiere cedex, France
ESA, Estec 2200 AG Noordwijk, Netherlands
Academgorodok, Institute of Biophysics, 660036 Krasnoyarsk, Russian Federation : 660036, Красноярск, Академгородок, д. 50, стр. 50

Доп.точки доступа:
Gros, J.-B.; Lasseur, C.; Tikhomirov, A.A.; Manukovsky, N.S.; Ushakova, S.A.; Zolotukhin, I.G.; Tirranen, L.S.; Borodina, E.V.; Kovalev, V.S.

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The morphological characteristics and the dynamics of biofilms formed by a transgenic Bacillus subtilis strain [Text] / O. A. Mogil'naya, T. Y. Krylova, L. Y. Popova // Microbiology. - 2003. - Vol. 72, Is. 4. - P. 509-510, DOI 10.1023/A:1025065311507. - Cited References: 5 . - ISSN 0026-2617

РУБ Microbiology

WOS
Держатели документа:
Russian Acad Sci, Inst Biophys, Siberian Div, Krasnoyarsk 660036, Russia
ИБФ СО РАН : 660036, Красноярск, Академгородок, д. 50, стр. 50
Доп.точки доступа:
Mogil'naya, O.A.; Krylova, T.Y.; Popova, L.Y.

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The effect of the pesticide delivery method on the microbial community of field soil / S. Prudnikova, N. Streltsova, T. Volova // Environ. Sci. Pollut. Res. - 2020, DOI 10.1007/s11356-020-11228-7. - Cited References:119. - This study was financially supported by the Ministry of Science and Higher Education of the Russian Federation, project "Agropreparations of the new generation: a strategy of construction and realization" (Agreement No 074-02-2018-328). . - Article in press. - ISSN 0944-1344. - ISSN 1614-7499

РУБ Environmental Sciences
Рубрики:
CONTROLLED-RELEASE
2,4-DICHLOROPHENOXYACETIC ACID
DEGRADATION
Кл.слова (ненормированные):
Soil microorganisms -- Pesticides -- Slow release formulations -- Biodegradable polymer -- Poly-3-hydroxybutyrate -- P(3HB)-degrading -- microorganisms
Аннотация: The study deals with the effects of herbicides (metribuzin, tribenuron-methyl, fenoxaprop-P-ethyl) and fungicides (tebuconazole, epoxiconazole, azoxystrobin) applied to soil as free pesticides or as slow release formulations embedded in a biodegradable composite matrix on the structure of the soil microbial community. The matrix consisted of a natural biopolymer poly-3-hydroxybutyrate [P(3HB)] and a filler-one of the natural materials (peat, clay, and wood flour). The soil microbial community was characterized, including the major eco-trophic groups of bacteria, dominant taxa of bacteria and fungi, and primary P(3HB)-degrading microorganisms, such asPseudomonas,Bacillus,Pseudarthrobacter,Streptomyces,Penicillium, andTalaromyces. The addition of free pesticides adversely affected the abundance of soil microorganisms; the decrease varied from 1.4 to 56.0 times for different types of pesticides. The slow release pesticide formulations, in contrast to the free pesticides, exerted a much weaker effect on soil microorganisms, no significant inhibition in the abundance of saprotrophic bacteria was observed, partly due to the positive effects of the composite matrix (polymer/natural material), which was a supplementary substrate for microorganisms. The slow release fungicide formulations, like the free fungicides, reduced the total abundance of fungi and inhibited the development of the phytopathogensFusariumandAlternaria. Thus, slow release formulations of pesticides preserve the bioremediation potential of soil microorganisms, which are the main factor of removing xenobiotics from the biosphere.

WOS
Держатели документа:
Siberian Fed Univ, 79 Svobodny Pr, Krasnoyarsk 660041, Russia.
Krasnoyarsk Sci Ctr SB RAS, Inst Biophys SB RAS, Fed Res Ctr, 50-50 Akademgorodok, Krasnoyarsk 660036, Russia.

Доп.точки доступа:
Prudnikova, Svetlana; Streltsova, Nadezhda; Volova, Tatiana; Ministry of Science and Higher Education of the Russian Federation, project "Agropreparations of the new generation: a strategy of construction and realization" [074-02-2018-328]

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The effect of the pesticide delivery method on the microbial community of field soil / S. Prudnikova, N. Streltsova, T. Volova // Environ. Sci. Pollut. Res. - 2020, DOI 10.1007/s11356-020-11228-7 . - Article in press. - ISSN 0944-1344
Кл.слова (ненормированные):
Biodegradable polymer -- P(3HB)-degrading microorganisms -- Pesticides -- Poly-3-hydroxybutyrate -- Slow release formulations -- Soil microorganisms
Аннотация: The study deals with the effects of herbicides (metribuzin, tribenuron-methyl, fenoxaprop-P-ethyl) and fungicides (tebuconazole, epoxiconazole, azoxystrobin) applied to soil as free pesticides or as slow release formulations embedded in a biodegradable composite matrix on the structure of the soil microbial community. The matrix consisted of a natural biopolymer poly-3-hydroxybutyrate [P(3HB)] and a filler—one of the natural materials (peat, clay, and wood flour). The soil microbial community was characterized, including the major eco-trophic groups of bacteria, dominant taxa of bacteria and fungi, and primary P(3HB)-degrading microorganisms, such as Pseudomonas, Bacillus, Pseudarthrobacter, Streptomyces, Penicillium, and Talaromyces. The addition of free pesticides adversely affected the abundance of soil microorganisms; the decrease varied from 1.4 to 56.0 times for different types of pesticides. The slow release pesticide formulations, in contrast to the free pesticides, exerted a much weaker effect on soil microorganisms, no significant inhibition in the abundance of saprotrophic bacteria was observed, partly due to the positive effects of the composite matrix (polymer/natural material), which was a supplementary substrate for microorganisms. The slow release fungicide formulations, like the free fungicides, reduced the total abundance of fungi and inhibited the development of the phytopathogens Fusarium and Alternaria. Thus, slow release formulations of pesticides preserve the bioremediation potential of soil microorganisms, which are the main factor of removing xenobiotics from the biosphere. © 2020, Springer-Verlag GmbH Germany, part of Springer Nature.

Scopus
Держатели документа:
Siberian Federal University, 79 Svobodny pr, Krasnoyarsk, 660041, Russian Federation
Institute of Biophysics SB RAS, Federal Research Center “Krasnoyarsk Science Center SB RAS”, 50/50 Akademgorodok, Krasnoyarsk, 660036, Russian Federation

Доп.точки доступа:
Prudnikova, S.; Streltsova, N.; Volova, T.

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The architectonics of colonies of Bacillus subtilis 2335 [Text] / A. P. Puzyr' [et al.] // Microbiology. - 2002. - Vol. 71, Is. 1. - P. 57-64, DOI 10.1023/A:1017950316748. - Cited References: 12 . - ISSN 0026-2617

РУБ Microbiology

Кл.слова (ненормированные):
electron microscopy -- Bacillus subtills -- spores -- vegetative cells -- glycocalyx -- architectonics of bacterial colonies
Аннотация: Colonies grown from vegetative Bacillus subtilis 2335 cells had a standard structure, with bacillar cells occupying the whole colony volume. At the same time, the colonies of this bacterium grown from germinated spores had an abnormal structure characterized by the location of cells in a surface layer 100-200 mum thick at the colony boundary with the air. The glycocalyx of the colonies grown from spores was characterized by a wetting angle theta(e) of 120degrees-160degrees, whereas that of the colonies grown from vegetative cells had an angle theta(c) as low as 5degrees-30degrees. It is suggested that spores and vegetative cells follow different strategies of substrate colonization and that the architectonics of bacterial colonies is determined by the physicochemical properties of the glycocalyx.

WOS
Держатели документа:
Russian Acad Sci, Inst Biophys, Siberian Div, Krasnoyarsk 660036, Russia
ИБФ СО РАН : 660036, Красноярск, Академгородок, д. 50, стр. 50

Доп.точки доступа:
Puzyr', A.P.; Mogil'naya, O.A.; Krylova, T.Y.; Popova, L.Y.

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Testing soil-like substrate for growing plants in bioregenerative life support systems / J. B. Gros [et al.] // Advances in Space Research. - 2005. - Vol. 36, Is. 7. - P1312-1318, DOI 10.1016/j.asr.2005.05.079 . - ISSN 0273-1177
Кл.слова (ненормированные):
Life support system -- Matter recycling -- Plants -- Soil-like substrate -- Biodiversity -- Correlation methods -- Growth kinetics -- Hormones -- Plants (botany) -- Recycling -- Soils -- Bioregeneration -- Life support system -- Matter recycling -- Soil-like substrate -- Space research
Аннотация: We studied soil-like substrate (SLS) as a potential candidate for plant cultivation in bioregenerative life support systems (BLSS). The SLS was obtained by successive conversion of wheat straw by oyster mushrooms and worms. Mature SLS contained 9.5% humic acids and 4.9% fulvic acids. First, it was shown that wheat, bean and cucumber yields as well as radish yields when cultivated on mature SLS were comparable to yields obtained on a neutral substrate (expanded clay aggregate) under hydroponics. Second, the possibility of increasing wheat and radish yields on the SLS was assessed at three levels of light intensity: 690, 920 and 1150 ?mol m-2 s-1 of photosynthetically active radiation (PAR). The highest wheat yield was obtained at 920 ?mol m-2 s-1, while radish yield increased steadily with increasing light intensity. Third, long-term SLS fertility was tested in a BLSS model with mineral and organic matter recycling. Eight cycles of wheat and 13 cycles of radish cultivation were carried out on the SLS in the experimental system. Correlation coefficients between SLS nitrogen content and total wheat biomass and grain yield were 0.92 and 0.97, respectively, and correlation coefficients between nitrogen content and total radish biomass and edible root yield were 0.88 and 0.87, respectively. Changes in hormone content (auxins, gibberellins, cytokinins and abscisic acid) in the SLS during matter recycling did not reduce plant productivity. Quantitative and species compositions of the SLS and irrigation water microflora were also investigated. Microbial community analysis of the SLS showed bacteria from Bacillus, Pseudomonas, Proteus, Nocardia, Mycobacterium, Arthrobacter and Enterobacter genera, and fungi from Trichoderma, Penicillium, Fusarium, Aspergillus, Mucor, Botrytis, and Cladosporium genera. В© 2005 COSPAR. Published by Elsevier Ltd. All rights reserved.

Scopus
Держатели документа:
LGCB, Universite B. Pascal, CUST, BP206, 63174 Aubiere cedex, France
Environmental Control and Life Support Section, ESA-Estec, Postbus 299, 2200 AG, Noordwijk, Netherlands
Institute of Biophysics (Russian Academy of Sciences, Siberian Branch), Academgorodok, Krasnoyarsk 660036, Russian Federation
Department of Plant Physiology and Biotechnology, Tomsk State University, Lenin av. 36, Tomsk 634050, Russian Federation : 660036, Красноярск, Академгородок, д. 50, стр. 50

Доп.точки доступа:
Gros, J.B.; Lasseur, Ch.; Tikhomirov, A.A.; Manukovsky, N.S.; Kovalev, V.S.; Ushakova, S.A.; Zolotukhin, I.G.; Tirranen, L.S.; Karnachuk, R.A.; Dorofeev, V.Yu.

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10.

Stability of recombinant plasmids in transgenic microorganisms under different environmental conditions / L. Yu. Popova [и др.] // Mikrobiologiya. - 2001. - Vol. 70, Is. 6. - С. 796-803 . - ISSN 0026-3656
Кл.слова (ненормированные):
Antibiotic resistance -- Bioluminescence interferon -- Recombinant plasmids -- Transgenic microorganisms -- article -- Bacillus subtilis -- culture medium -- Escherichia coli -- genetic engineering -- genetic recombination -- genetics -- R factor -- Bacillus subtilis -- Culture Media -- Escherichia coli -- Genetic Engineering -- R Factors -- Recombination, Genetic
Аннотация: The copy number of R plasmids weakly depends on the selective pressure of the respective antibiotic but does depend on the physiology of the host species and the type of plasmids and cloned genes, whose expression leads to a further load on the biosynthetic apparatus of cells. The last factor is critical in the maintenance of recombinant plasmids in transgenic microorganisms.

Scopus
Держатели документа:
Institute of Biophysics, Siberian Division, Russian Academy of Sciences, Krasnoyarsk, 660036, Russian Federation : 660036, Красноярск, Академгородок, д. 50, стр. 50

Доп.точки доступа:
Popova, L.Yu.; Maksimova, E.E.; Lobova, T.I.; Kargatova, T.V.; Boyandin, A.N.; Krylova, T.Yu.; Pechurkin, N.S.

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11.

Psychrophilic and psychrotolerant heterotrophic microorganisms of Middle Siberian karst cavities [Text] / S. V. Khizhnyak [et al.] // Russ. J. Ecol. - 2003. - Vol. 34, Is. 4. - P. 231-235, DOI 10.1023/A:1024537513439. - Cited References: 12 . - ISSN 1067-4136

РУБ Ecology

Кл.слова (ненормированные):
psychrophilic and psychrotolerant microorganisms -- karst cavities -- caves -- heterotrophic microorganisms
Аннотация: The natural microflora of Middle Siberian karst cavities, which comprises psychrotolerant bacteria and fungi capable of growing at 3-15 and 3...+28degreesC, respectively, has been studied. Bacteria are ubiquitous in caves, their count varying from 10(3) to 10(7) cells/g ground. The bacteria have been identified as Pseudomonas, Arthrobacter, Bacillus, and coryneform bacteria. Fungi have been found in places exposed to increased anthropogenic impact, their count being as large as 10(6) to 10(7) cells/g ground. Mucor Penicillium, and Chrysosporium were dominant fungal genera.

WOS
Держатели документа:
Krasnoyarsk State Agrarian Univ, Krasnoyarsk 660001, Russia
Russian Acad Sci, Siberian Div, Inst Biophys, Krasnoyarsk 660036, Russia
ИБФ СО РАН : 660036, Красноярск, Академгородок, д. 50, стр. 50

Доп.точки доступа:
Khizhnyak, S.V.; Tausheva, I.V.; Berezikova, A.A.; Nesterenko, E.V.; Rogozin, D.Y.

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12.

Psychrophilic and psychrotolerant heterotrophic microorganisms of Middle Siberian karst cavities / S. V. Khizhnyak [et al.] // Russian Journal of Ecology. - 2003. - Vol. 34, Is. 4. - P231-235, DOI 10.1023/A:1024537513439 . - ISSN 1067-4136
Кл.слова (ненормированные):
Caves -- Heterotrophic microorganisms -- Karst cavities -- Psychorophilic and psychrotolerant microorganisms -- bacterium -- cavernicolous species -- fungus -- heterotrophy -- karst -- low temperature -- Russian Federation -- Arthrobacter -- Bacteria (microorganisms) -- Chrysosporium -- Corynebacteriaceae -- Fungi -- Mucor -- Penicillium -- Pseudomonas
Аннотация: The natural microflora of Middle Siberian karst cavities, which comprises psychrotolerant bacteria and fungi capable of growing at 3-15 and 3...+28В°C, respectively, has been studied. Bacteria are ubiquitous in caves, their count varying from 103 to 107 cells/g ground. The bacteria have been identified as Pseudomonas, Arthrobacter, Bacillus, and coryneform bacteria. Fungi have been found in places exposed to increased anthropogenic impact, their count being as large as 106 to 107 cells/g ground. Mucor, Penicillium, and Chrysosporium were dominant fungal genera.

Scopus
Держатели документа:
Krasnoyarsk State Agrarian Univ., Pr. Mira 88, Krasnoyarsk 660001, Russian Federation
Institute of Biophysics, Siberian Division, Russian Academy of Sciences, Akademgorodok, Krasnoyarsk 660036, Russian Federation : 660036, Красноярск, Академгородок, д. 50, стр. 50

Доп.точки доступа:
Khizhnyak, S.V.; Tausheva, I.V.; Berezikova, A.A.; Nesterenko, E.V.; Rogozin, D.Yu.

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13.

Population heterogeneity of plasmid-bearing and plasmid-free bacillus subtilis strains under different environmental conditions / T. Yu. Krylova [и др.] // Mikrobiologiya. - 2000. - Vol. 69, Is. 2. - С. 270-275 . - ISSN 0026-3656
Кл.слова (ненормированные):
Bacillus subtilis -- Heterogeneity -- Introduction -- Microcosm -- Recombinant plasmid -- article -- Bacillus subtilis -- culture medium -- genetic recombination -- genetics -- plasmid -- Bacillus subtilis -- Culture Media -- Plasmids -- Recombination, Genetic
Аннотация: The population heterogeneity of recombinant and plasmid-free Bacillus subtilis strains introduced into aquatic microcosms was studied. After introduction, the population of the plasmid-free strain B. subtilis 2335 in microcosms has long been represented by both vegetative cells and spores, whereas, already ten days after introduction, the population of the recombinant strain B. subtilis 2335/105 (Km rInf +) was represented only by spores. The number of plasmid copies in the spore isolates of the recombinant strain was the same as before introduction, but the plasmid abundance in the vegetative isolates of this strain decreased. The isolates of B. subtilis 2335/105 obtained from microcosms and the variants of this strain obtained by ten successive subcultures on M9 and 0.1 ? M9 media with and without kanamycin (Km) differed in the number of plasmid copies, Km resistance, and maximum biomass yield during batch cultivation. Irrespective of the presence of Km, more than 50% of the variants subcultured on M9 medium showed reduced plasmid abundance. At the same time, about 70% of the variants subcultured on 0.1 ? M9 medium with Km and 90% of the variants subcultured on the same medium without Km retained the initial number of plasmid copies. The variants subcultured on media with Km retained the initial biomass level. In more than 70% of the variants isolated from media without Km, the biomass yield increased.

Scopus
Держатели документа:
Institute of Biophysics, Siberian Division, Russian Academy of Sciences, Krasnoyarsk, 660036, Russian Federation : 660036, Красноярск, Академгородок, д. 50, стр. 50

Доп.точки доступа:
Krylova, T.Yu.; Popova, L.Yu.; Pechurkin, N.S.; Kashperova, T.A.; Belyavskaya, V.A.

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14.

Population heterogeneity of plasmid-bearing and plasmid-free Bacillus subtilis strains under different environmental conditions / T. Yu. Krylova [et al.] // Microbiology. - 2000. - Vol. 69, Is. 2. - P220-224 . - ISSN 0026-2617
Кл.слова (ненормированные):
Bacillus subtilis -- Heterogeneity -- Introduction -- Microcosm -- Recombinant plasmid
Аннотация: The population heterogeneity of recombinant and plasmid-free Bacillus subtilis strains introduced into aquatic microcosms was studied. After introduction, the population of the plasmid-free strain B. subtilis 2335 in microcosms has long been represented by both vegetative cells and spores, whereas, already ten days after introduction, the population of the recombinant strain B. subtilis 2335/105 (KmI)Inf+) was represented only by spores. The number of plasmid copies in the spore isolates of the recombinant strain was the same as before introduction, but the plasmid abundance in the vegetative isolates of this strain decreased. The isolates of B. subtilis 2335/105 obtained from microcosms and the variants of this strain obtained by ten successive subcultures on M9 and 0.1?M9 media with and without kanamycin (Km) differed in the number of plasmid copies, Km resistance, and maximum biomass yield during batch cultivation. Irrespective of the presence of Km, more than 50% of the variants subcultured on M9 medium showed reduced plasmid abundance. At the same time, about 70% of the variants subcultured on 0.1 ? M9 medium with Km and 90% of the variants subcultured on the same medium without Km retained the initial number of plasmid copies. The variants subcultured on media with Km retained the initial biomass level. In more than 70% of the variants isolated from media without Km, the biomass yield increased. В© 2000 MAIK "Nauka/Interperiodica".

Scopus
Держатели документа:
Institute of Biophysics, Siberian Division, Russian Academy of Sciences, Krasnoyarsk, 660036, Russian Federation : 660036, Красноярск, Академгородок, д. 50, стр. 50

Доп.точки доступа:
Krylova, T.Yu.; Popova, L.Yu.; Pechurkin, N.S.; Kashperova, T.A.; Belyavskaya, V.A.

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15.

Population dynamics of transgenic microorganisms in the different microecosystem conditions / L. Yu. Popova [et al.] // Advances in Space Research. - 2001. - Vol. 27, Is. 9. - P1571-1579, DOI 10.1016/S0273-1177(01)00248-4 . - ISSN 0273-1177
Кл.слова (ненормированные):
Ecosystems -- Escherichia coli -- Genes -- Interferons -- Luminescence -- Vaccines -- Microcosms -- Microorganisms -- fresh water -- microorganism -- adaptation -- article -- Bacillus subtilis -- comparative study -- ecosystem -- Escherichia coli -- gene expression -- genetics -- growth, development and aging -- hazardous waste -- microbiology -- Micrococcus -- osmotic pressure -- plasmid -- population dynamics -- risk assessment -- transgenic organism -- Adaptation, Physiological -- Bacillus subtilis -- Containment of Biohazards -- Ecosystem -- Escherichia coli -- Fresh Water -- Gene Expression -- Micrococcus -- Organisms, Genetically Modified -- Osmotic Pressure -- Plasmids -- Population Dynamics -- Risk Assessment -- Water Microbiology
Аннотация: The role of key environmental factors in adaptation of spore-forming and non-spore-forming transgenic microorganisms (TM) have been studied in model ecosystems. Model TM Escherichia coli Z905 (bearing plasmid genes of bacterial luminescence Ap1Lux+) has been found to have a higher adaptation potential than TM Bacillus subtilis 2335/105 (bearing genes of human ? 2-interferon Km1Inf+), planned for employment as a living vaccine under varying environmental conditions. Effects of abiotic factors on migration of natural and recombinant plasmids between microorganisms under model ecosystem conditions has been estimated. The transgenic microorganisms with low copy number survived better under introduction conditions in the microcosms studied. This trend has been shown to be independent of the microcosm type and its complexity. В© 2001 COSPAR. Published by Elsevier Science Ltd. All rights reserved.

Scopus
Держатели документа:
Institute of Biophysics, Siberian Branch, Russian Academy of Sciences, Akademgorodok, Krasnoyarsk 660036, Russian Federation : 660036, Красноярск, Академгородок, д. 50, стр. 50

Доп.точки доступа:
Popova, L.Yu.; Lobova, T.I.; Krylova, T.Yu.; Kargatova, T.V.; Maksimova, E.E.; Boyandin, A.N.; Pechurkin, N.S.

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16.

Population dynamics of transgenic microorganisms in the different microecosystem conditions [Text] / L. Y. Popova [et al.] ; ed. , AN Boyand // SPACE LIFE SCIENCES: CLOSED ECOLOGICAL SYSTEMS: EARTH AND SPACE APPLICATIONS. Ser. ADVANCES IN SPACE RESEARCH : ELSEVIER SCIENCE BV, 2001. - Vol. 27: F4 4 Symposium of COSPAR Scientific Commission F held at the 33rd COSPAR Scientific Assembly (JUL, 2000, WARSAW, POLAND), Is. 9. - P. 1571-1579, DOI 10.1016/S0273-1177(01)00248-4. - Cited References: 8 . - ISBN 0273-1177

РУБ Engineering, Aerospace + Astronomy & Astrophysics + Geosciences, Multidisciplinary + Meteorology & Atmospheric Sciences
Рубрики:
GENETICALLY-ENGINEERED MICROORGANISMS
Аннотация: The role of key environmental factors in adaptation of spore-forming and non-spore-forming transgenic microorganisms (TM) have been studied in model ecosystems. Model TM Escherichia coli Z905 (bearing plasmid genes of bacterial luminescence Ap(r)Lux(+)) has been found to have a higher adaptation potential than TM Bacillus subtilis 2335/105 (bearing genes of human alpha 2-interferon Km(r)lnf(+)), planned for employment as a living vaccine under varying environmental conditions. Effects of abiotic factors on migration of natural and recombinant plasmids between microorganisms under model ecosystem conditions has been estimated. The transgenic microorganisms with low copy number survived better under introduction conditions in the microcosms studied. This trend has been shown to be independent of the microcosm type and its complexity. (C) 2001 COSPAR. Published by Elsevier Science Ltd. All rights reserved.

WOS
Держатели документа:
Russian Acad Sci, Siberian Branch, Inst Biophys, Krasnoyarsk 660036, Russia
ИБФ СО РАН : 660036, Красноярск, Академгородок, д. 50, стр. 50

Доп.точки доступа:
Popova, L.Y.; Lobova, T.I.; Krylova, T.Y.; Kargatova, T.V.; Maksimova, E.E.; Boyandin, A.N.; Pechurkin, N.S.; Boyand, , AN \ed.\

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17.

On the problem of genome redundancy in viruses and prokaryotes [Text] / M. G. Sadovsky // Russ. J. Genet. - 2002. - Vol. 38, Is. 5. - P. 575-581, DOI 10.1023/A:1015503617023. - Cited References: 10 . - ISSN 1022-7954

РУБ Genetics & Heredity

Аннотация: A specific index of nucleotide sequence redundancy, the specific restriction length of a finite frequency dictionary, was determined for a complete set of genes in some viral genomes and a genome of a bacterium, Bacillus subtilis. The distribution of the gene number over the specific restriction length was shown to be bimodal for viral genomes and unimodal for the Bac. subtilis genome. These results agree with earlier data.

WOS
Держатели документа:
Russian Acad Sci, Inst Biophys, Krasnoyarsk 660036, Russia
ИБФ СО РАН : 660036, Красноярск, Академгородок, д. 50, стр. 50

Доп.точки доступа:
Sadovsky, M.G.

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18.

Microbial Degradation of Polyhydroxyalkanoates with Different Chemical Compositions and Their Biodegradability / T. G. Volova [et al.] // Microb. Ecol. - 2017. - Vol. 73, Is. 2. - P353-367, DOI 10.1007/s00248-016-0852-3. - Cited References:65. - This study was supported by the Russian Science Foundation (Grant No. 14-26-00039). . - ISSN 0095-3628. - ISSN 1432-184X

РУБ Ecology + Marine & Freshwater Biology + Microbiology
Рубрики:
TROPICAL COASTAL WATERS
PHA-DEGRADING BACTERIA
ALCALIGENES-EUTROPHUS
Кл.слова (ненормированные):
Degradable polyhydroxyalkanoates -- PHA -- Soil -- PHA-degrading -- microorganisms
Аннотация: The study addresses degradation of polyhydroxyalkanoates (PHA) with different chemical compositions-the polymer of 3-hydroxybutyric acid [P(3HB)] and copolymers of P(3HB) with 3-hydroxyvalerate [P(3HB/3HV)], 4-hydroxybutyrate [P(3HB/4HB)], and 3-hydroxyhexanoate [P(3HB/3HHx)] (10-12 mol%)-in the agro-transformed field soil of the temperate zone. Based on their degradation rates at 21 and 28 A degrees C, polymers can be ranked as follows: P(3HB/4HB) > P(3HB/3HHx) > P(3HB/3HV) > P(3HB). The microbial community on the surface of the polymers differs from the microbial community of the soil with PHA specimens in the composition and percentages of species. Thirty-five isolates of bacteria of 16 genera were identified as PHA degraders by the clear zone technique, and each of the PHA had both specific and common degraders. P(3HB) was degraded by bacteria of the genera Mitsuaria, Chitinophaga, and Acidovorax, which were not among the degraders of the three other PHA types. Roseateles depolymerans, Streptomyces gardneri, and Cupriavidus sp. were specific degraders of P(3HB/4HB). Roseomonas massiliae and Delftia acidovorans degraded P(3HB/3HV), and Pseudoxanthomonas sp., Pseudomonas fluorescens, Ensifer adhaerens, and Bacillus pumilus were specific P(3HB/3HHx) degraders. All four PHA types were degraded by Streptomyces.

WOS,
Смотреть статью
Держатели документа:
Russian Acad Sci, Siberian Branch, Inst Biophys, Akademgorodok 50-50, Krasnoyarsk, Russia.

Доп.точки доступа:
Volova, Tatiana G.; Prudnikova, Svetlana V.; Vinogradova, Olga N.; Syrvacheva, Darya A.; Shishatskaya, Ekaterina I.; Russian Science Foundation [14-26-00039]

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19.

Microbial degradation of polyhydroxyalkanoates in tropical soils / A. N. Boyandin [et al.] // International Biodeterioration and Biodegradation. - 2013. - Vol. 83. - P77-84, DOI 10.1016/j.ibiod.2013.04.014 . - ISSN 0964-8305
Кл.слова (ненормированные):
Biopolymer properties -- Biopolymers -- PHA degrading microorganisms -- Polyhydroxyalkanoates (PHAs) -- Soil biodegradation -- 3-hydroxybutyric acid -- Degree of crystallinity -- Hydroxyalkanoic acids -- Microbial characteristics -- Microbial degradation -- Polyhydroxyalkanoates -- Polymer molecular mass -- Soil biodegradations -- Bacteriology -- Biomolecules -- Biopolymers -- Microorganisms -- Soils -- Tropics -- Biodegradation -- biodegradation -- chemical composition -- microbial activity -- microbial community -- molecular analysis -- organic compound -- polymer -- soil degradation -- soil microorganism -- tropical soil
Аннотация: The integrated study addressing biodegradation of microbial linear polyesters of hydroxyalkanoic acids (polyhydroxyalkanoates, PHAs) in tropical conditions by microbial communities of Vietnamese soils was performed in locations close to Hanoi and Nha Trang, which differed in their weather conditions and microbial communities. It shows that PHA degradation in tropical soils is influenced by polymer chemical composition, specimen shape, and microbial characteristics. The homopolymer of 3-hydroxybutyric acid is degraded at higher rates than the copolymer of 3-hydroxybutyric and 3-hydroxyvaleric acids. The average rates of mass loss were 0.04-0.33% per day for films and 0.02-0.18% for compact pellets. PHA degradation was accompanied by a decrease in the polymer molecular mass and, usually, an increase in the degree of crystallinity, suggesting preferential degradation of the amorphous phase. Under the study conditions, representatives of the bacterial genera Burkholderia, Bacillus, Cupriavidus, Mycobacterium, and Nocardiopsis and such micromycetes as Acremonium, Gongronella, Paecilomyces, and Penicillium, Trichoderma have been identified as major PHA degraders. В© 2013 Elsevier Ltd.

Scopus
Держатели документа:
Institute of Biophysics of Siberian Branch, Russian Academy of Sciences, Krasnoyarsk, Russian Federation
Siberian Federal University, Krasnoyarsk, Russian Federation
A.N. Severtsov Institute of Ecology and Evolution, Russian Academy of Sciences, Moscow, Russian Federation
The Joint Russian-Vietnam Tropical Research and Test Center, Hanoi, Viet Nam
Inst. of Chemical Biology and Fundamental Medicine, Siberian Branch of Russian Academy of Sciences, Novosibirsk, Russian Federation : 660036, Красноярск, Академгородок, д. 50, стр. 50

Доп.точки доступа:
Boyandin, A.N.; Prudnikova, S.V.; Karpov, V.A.; Ivonin, V.N.; D?, N.L.; Nguy?n, T.H.; Le, T.M.H.; Filichev, N.L.; Levin, A.L.; Filipenko, M.L.; Volova, T.G.; Gitelson, I.I.

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20.

Microbial degradation of polyhydroxyalkanoates in tropical soils / A. N. Boyandin [et al.] // Int. Biodeterior. Biodegrad. - 2013. - Vol. 83. - P77-84, DOI 10.1016/j.ibiod.2013.04.014. - Cited References: 74. - This study was financially supported by Project "Biotechnologies of novel biomaterials" (Agreement No. 11.G34.31.0013) in accordance with Resolution No. 220 of the Government of the Russian Federation of April 9, 2010, "On measures designed to attract leading scientists to the Russian institutions of higher learning". . - 8. - ISSN 0964-8305

РУБ Biotechnology & Applied Microbiology + Environmental Sciences
Рубрики:
POLY-BETA-HYDROXYBUTYRATE
   CHAIN-LENGTH POLYHYDROXYALKANOATES
   POLY(3-HYDROXYBUTYRATE) DEPOLYMERASE
   COASTAL WATERS
   PHA FILMS
   BIODEGRADATION
   BACTERIA
   IDENTIFICATION
   POLYESTERS
   POLY(3-HYDROXYBUTYRATE-CO-3-HYDROXYVALERATE)
Кл.слова (ненормированные):
Polyhydroxyalkanoates (PHAs) -- Biopolymers -- Biopolymer properties -- Soil biodegradation -- PHA degrading microorganisms
Аннотация: The integrated study addressing biodegradation of microbial linear polyesters of hydroxyalkanoic acids (polyhydroxyalkanoates, PHAs) in tropical conditions by microbial communities of Vietnamese soils was performed in locations close to Hanoi and Nha Trang, which differed in their weather conditions and microbial communities. It shows that PHA degradation in tropical soils is influenced by polymer chemical composition, specimen shape, and microbial characteristics. The homopolymer of 3-hydroxybutyric acid is degraded at higher rates than the copolymer of 3-hydroxybutyric and 3-hydroxyvaleric acids. The average rates of mass loss were 0.04-0.33% per day for films and 0.02-0.18% for compact pellets. PHA degradation was accompanied by a decrease in the polymer molecular mass and, usually, an increase in the degree of crystallinity, suggesting preferential degradation of the amorphous phase. Under the study conditions, representatives of the bacterial genera Burkholderia, Bacillus, Cupriavidus, Mycobacterium, and Nocardiopsis and such micromycetes as Acremonium, Gongronella, Paecilomyces, and Penicillium, Trichoderma have been identified as major PHA degraders. (C) 2013 Elsevier Ltd. All rights reserved.

Держатели документа:
[Boyandin, Anatoly N.
Volova, Tatiana G.
Gitelson, Iosif I.] Russian Acad Sci, Inst Biophys, Siberian Branch, Krasnoyarsk, Russia
[Prudnikova, Svetlana V.
Volova, Tatiana G.] Siberian Fed Univ, Krasnoyarsk, Russia
[Karpov, Valery A.] Russian Acad Sci, AN Severtsov Inst Ecol & Evolut, Moscow, Russia
[Ivonin, Vladimir N.
Ngoc Lanh Do
Thi Hoai Nguyen
Thi My Hiep Le
Filichev, Nikolay L.
Levin, Alexander L.] Joint Russian Vietnam Trop Res & Test Ctr, Hanoi, Vietnam
[Filipenko, Maxim L.] Russian Acad Sci, Siberian Branch, Inst Chem Biol & Fundamental Med, Novosibirsk, Russia : 660036, Красноярск, Академгородок, д. 50, стр. 50

Доп.точки доступа:
Boyandin, A.N.; Prudnikova, S.V.; Karpov, V.A.; Ivonin, V.N.; Do, N.L.; Nguyen, T.H.; Le, TMH; Filichev, N.L.; Levin, A.L.; Filipenko, M.L.; Volova, T.G.; Gitelson, I.I.

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