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Effect of soil salinization on the productivity of pasture in the arid land / N. A. Kononova, T. I. Pisman, A. P. Shevyrnogov // IOP Conference Series: Earth and Environmental Science : IOP Publishing Ltd, 2020. - Vol. 548: 3rd International Conference on Agribusiness, Environmental Engineering and Biotechnologies, AGRITECH-III 2020 (18 June 2020 through 20 June 2020, ) Conference code: 162670, Is. 7. - Ст. 072063, DOI 10.1088/1755-1315/548/7/072063
Кл.слова (ненормированные):
Biodiversity -- Biotechnology -- Ecosystems -- Plants (botany) -- Productivity -- Different soils -- Field investigation -- Field studies -- Halophytic plants -- Plant communities -- Seasonal dynamics -- Soil salinity -- Soil salinization -- Soils
Аннотация: This study compares the field data of the seasonal dynamics of halophytic plant productivity as dependent upon soil salinity level and soil type. The field study was carried out in the coastal area of Lake Kurinka (the Republic of Khakasia, south of Middle Siberia) between May and September of 2014 and 2016. Two plant communities with different soil salinity levels were studied. Results of the field investigation show that there is a correlation between plant growth and the soil salinity level. With high-salinity (3.72%) soils, the productivity of halophyte plants is lower than productivity with low-salinity (0.175%) soils. © Published under licence by IOP Publishing Ltd.

Scopus
Держатели документа:
Institute of Biophysics, Siberian Branch, Russian Academy of Sciences, 50/50 Akademgorodok, Krasnoyarsk, 660036, Russian Federation

Доп.точки доступа:
Kononova, N. A.; Pisman, T. I.; Shevyrnogov, A. P.

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Overview of past, current, and future ecosystem and biodiversity trends of inland saline lakes of Europe and Central Asia / E. Zadereev, O. Lipka, B. Karimov [et al.] // Inland Waters. - 2020, DOI 10.1080/20442041.2020.1772034. - Cited References:123 . - Article in press. - ISSN 2044-2041. - ISSN 2044-205X

РУБ Limnology + Marine & Freshwater Biology
Рубрики:
ARAL SEA
   SHALLOW LAKES
   SALT LAKES
   WATER-LEVEL
   HISTORY
Кл.слова (ненормированные):
aquatic -- climate -- conservation -- habitat -- salinity
Аннотация: This review of trends in inland saline lakes of Europe and Central Asia is based on the relevant section of the Intergovernmental Science-Policy Platform on Biodiversity and Ecosystem Services (IPBES) Regional Assessment Report for Europe and Central Asia (ECA). We assessed the present status of ECA saline lakes and the effects of direct drivers (climate change, land use, pollution, resource exploitation, invasive species) on ecosystem health and biodiversity. We also assessed past, current and future trends using habitat area and degradation, species richness, and endangered species as indicators. No uniform scenario is applicable to saline lakes in the region. The desiccation of the Aral Sea is caused mainly by land use change and water extraction. In the Caspian Sea, river modifications, water pollution, overfishing and poaching, and species invasions have led to a decrease in species richness and have threatened endemic species. Although trends for smaller saline lakes vary, our analysis demonstrates that land use change, over-exploitation, and pollution are more important direct drivers of ecosystem health and biodiversity than climate change. The establishment of baseline biodiversity values for saline lakes is, however, complicated because biodiversity and the food-web structure are variable and depend strongly on salinity. Thus, there is a need to classify the ecological quality, biodiversity and ecosystem services of saline lakes along a salinity gradient. The improvement of water management and reuse of water, conservation measures, and introduction of climate-smart agriculture are basic conditions for the sustainable use of saline lakes in the region.

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Держатели документа:
Russian Acad Sci, Krasnoyarsk Sci Ctr, Inst Biophys, Siberian Branch, Krasnoyarsk, Russia.
Siberian Fed Univ, Krasnoyarsk, Russia.
Yu A Izrael Inst Global Climate & Ecol, Moscow, Russia.
Tashkent Inst Irrigat & Agr Mechanizat Engineers, Tashkent, Uzbekistan.
RAS, Shirshov Inst Oceanol, Gelendzhik, Russia.
WWF Russia, Moscow, Russia.
Univ Porto, Fac Sci, Dept Biol, Porto, Portugal.
Interdisciplinary Ctr Marine & Environm Res Ciima, Porto, Portugal.
Azerbaijan Natl Acad Sci, Inst Bot, Baku, Azerbaijan.
Ariel Univ, Dept Chem Engn, Ariel, Israel.
Ariel Univ, Eastern R&D Ctr, Ariel, Israel.
Univ Bristol, Fac Engn, Bristol, Avon, England.
RAS, Inst Geog, Moscow, Russia.
Inst Global Environm Strategies, Hayama, Kanagawa, Japan.
Univ Bern, Inst Plant Sci, Bern, Switzerland.

Доп.точки доступа:
Zadereev, Egor; Lipka, Oksana; Karimov, Bakhtiyor; Krylenko, Marina; Elias, Victoria; Pinto, Isabel Sousa; Alizade, Valida; Anker, Yaakov; Feest, Alan; Kuznetsova, Daria; Mader, Andre; Salimov, Rashad; Fischer, Markus; Sousa, Isabel

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Biogeographic patterns of planktonic and meiobenthic fauna diversity in inland waters of the Russian Arctic / E. Fefilova, O. Dubovskaya, L. Frolova [et al.] // Freshw. Biol. - 2020, DOI 10.1111/fwb.13624. - Cited References:63. - We would like to thank A. Kotov, N. Korovchinsky, A. Sinev, E. Bekker, N. Smirnov (all from Severtsov Institute of Ecology and Evolution of RAS) for their assistance in Cladocera identification. We are very grateful to Jennifer Lento (University of New Brunswick, Canada) for helping us obtain elevation, temperature, and precipitation data from World Climate and ArcticDEM (NGA-NSF). We are also grateful to Willem Goedkoop for helpful comments on an earlier version of the manuscript. The study was performed in part as Federal Tasks of Department of Animals Ecology of the Institute of Biology of Komi Science Centre of the Ural Branch of the Russian Academy of Sciences (AAAA-A17-117112850235-2), and also of Institute of Biophysics of Federal Research Center "Krasnoyarsk Science Center" of Siberian Branch of Russian Academy of Sciences (project No. 51.1.1) and the Siberian Federal University (project No. FSRZ-2020-0006). Monitoring investigations in the Lena River Delta were conducted under the framework of Russian-German, "Lena" expeditions (Alfred Wegener Institute, Potsdam, Germany) with logistic and technical support of Scientific Research Station "Samoylov Island" (Trofimuk Institute of Petroleum-Gas, Geology and Geophysics SB RAS, Novosibirsk). We are grateful to three anonymous reviewers, Guest Editor, Dr Joseph Culp, and the Chief Editor, Prof. Belinda Robson for their useful comments to improve the manuscript. . - Article in press. - ISSN 0046-5070. - ISSN 1365-2427

РУБ Ecology + Marine & Freshwater Biology
Рубрики:
GLOBAL DIVERSITY
   CRUSTACEAN ZOOPLANKTON
   CLADOCERA
   ANOMOPODA
Кл.слова (ненормированные):
cladocerans -- copepods -- rotifers -- spatial and temporal trends -- species -- richness
Аннотация: Broad-scale assessment of biodiversity is needed for detection of future changes across substantial regions of the Arctic. Presently, there are large data and information gaps in species composition and richness of the freshwater planktonic and meiobenthos communities of the Russian Arctic. Analysis of these data is very important for identifying the spatial distribution and temporal changes in species richness and diversity of rotifers, cladocerans, and copepods in the continental Russian Arctic. We investigated biogeographic patterns of freshwater plankton and meiobenthos fromc. 67 degrees to 73 degrees N by analysing data over the period 1960-2017. These data include information on the composition of rotifers, cladocerans, and copepods obtained from planktonic and meiobenthic samples, as well as from subfossil remains in bottom sediments of seven regions from the Kola Peninsula in the west, to the Indigirka River Basin (east Siberia) in the east. Total richness included 175 species comprised of 49 rotifer genera, 81 species from 40 cladoceran genera, and 101 species from 42 genera of calanoid, cyclopoid, and harpacticoid copepods. Longitudinal trends in rotifer and micro-crustacean diversity were revealed by change in species composition from Europe to eastern Siberia. The most common and widespread species were 19 ubiquitous taxa that includedKellicottia longispina(Rotifera),Chydorus sphaericuss. lat. (Cladocera),Heterocope borealis,Acanthocyclops vernalis, andMoraria duthiei(Copepoda). The highest number of rare species was recorded in the well-studied region of the Bolshezemelskaya tundra and in the Putorana Plateau. The total number of copepod and rotifer species in both Arctic lakes and ponds tended to increase with latitude. Relative species richness of copepods was positively associated with waterbody area, elevation, and precipitation, while relative species richness of cladocerans was positively related to temperature. This result is consistent with known thermophilic characteristics of cladocerans and the cold tolerance properties of copepods, with the former being dominant in shallow, warmer waterbodies of some western regions, and the latter being dominant in large cold lakes and waterbodies of eastern regions. Rotifers showed a negative association with these factors. Alpha- and beta-diversity of zooplankton in the Russian Arctic were strongly related to waterbody type. Lake zooplankton communities were more diverse than those in pond and pool systems. Moreover, the highest beta-diversity values were observed in regions that showed a greater breadth in latitude and highly heterogeneous environmental conditions and waterbody types (Bolshezemelskaya tundra and Putorana Plateau). Redistribution of freshwater micro-fauna caused by human activities occurred in the 1990s and 2000s. As a result of climate warming, a few cladoceran species appear to have extended their range northward. Nevertheless, the rotifer and micro-crustacean fauna composition and diversity of the majority of Arctic regions generally remain temporally conservative, and spatial differences in composition and species richness are chiefly associated with the differences between the warmer European and colder east Siberian climates.

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Держатели документа:
Russian Acad Sci, Inst Biol, Komi Sci Ctr, Ural Branch, Kommunisticheskaya 28, Syktyvkar 167982, Russia.
Russian Acad Sci, Inst Biophys, Fed Res Ctr, Krasnoyarsk Sci Ctr,Siberian Branch, Krasnoyarsk, Russia.
Siberian Fed Univ, Krasnoyarsk, Russia.
Kazan Fed Univ, Inst Geol & Petr Technol, Kazan, Russia.
Lena Delta Nat Reserve, Tiksi, Sakha Republic, Russia.
Univ Helsinki, Finnish Nat Hist Museum LUOMUS, Helsinki, Finland.

Доп.точки доступа:
Fefilova, Elena; Dubovskaya, Olga; Frolova, Larisa; Abramova, Ekaterina; Kononova, Olga; Nigamatzyanova, Gulnara; Zuev, Ivan; Kochanova, Elena; Federal Tasks of Department of Animals Ecology of the Institute of Biology of Komi Science Centre of the Ural Branch of the Russian Academy of Sciences [AAAA-A17-117112850235-2]; Institute of Biophysics of Federal Research Center "Krasnoyarsk Science Center" of Siberian Branch of Russian Academy of Sciences [51.1.1]; Siberian Federal University [FSRZ-2020-0006]

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Biogeographic patterns of planktonic and meiobenthic fauna diversity in inland waters of the Russian Arctic / E. Fefilova, O. Dubovskaya, L. Frolova [et al.] // Freshw. Biol. - 2020, DOI 10.1111/fwb.13624 . - Article in press. - ISSN 0046-5070
Кл.слова (ненормированные):
cladocerans -- copepods -- rotifers -- spatial and temporal trends -- species richness
Аннотация: Broad-scale assessment of biodiversity is needed for detection of future changes across substantial regions of the Arctic. Presently, there are large data and information gaps in species composition and richness of the freshwater planktonic and meiobenthos communities of the Russian Arctic. Analysis of these data is very important for identifying the spatial distribution and temporal changes in species richness and diversity of rotifers, cladocerans, and copepods in the continental Russian Arctic. We investigated biogeographic patterns of freshwater plankton and meiobenthos from c. 67° to 73°N by analysing data over the period 1960–2017. These data include information on the composition of rotifers, cladocerans, and copepods obtained from planktonic and meiobenthic samples, as well as from subfossil remains in bottom sediments of seven regions from the Kola Peninsula in the west, to the Indigirka River Basin (east Siberia) in the east. Total richness included 175 species comprised of 49 rotifer genera, 81 species from 40 cladoceran genera, and 101 species from 42 genera of calanoid, cyclopoid, and harpacticoid copepods. Longitudinal trends in rotifer and micro-crustacean diversity were revealed by change in species composition from Europe to eastern Siberia. The most common and widespread species were 19 ubiquitous taxa that included Kellicottia longispina (Rotifera), Chydorus sphaericus s. lat. (Cladocera), Heterocope borealis, Acanthocyclops vernalis, and Moraria duthiei (Copepoda). The highest number of rare species was recorded in the well-studied region of the Bolshezemelskaya tundra and in the Putorana Plateau. The total number of copepod and rotifer species in both Arctic lakes and ponds tended to increase with latitude. Relative species richness of copepods was positively associated with waterbody area, elevation, and precipitation, while relative species richness of cladocerans was positively related to temperature. This result is consistent with known thermophilic characteristics of cladocerans and the cold tolerance properties of copepods, with the former being dominant in shallow, warmer waterbodies of some western regions, and the latter being dominant in large cold lakes and waterbodies of eastern regions. Rotifers showed a negative association with these factors. Alpha- and ?-diversity of zooplankton in the Russian Arctic were strongly related to waterbody type. Lake zooplankton communities were more diverse than those in pond and pool systems. Moreover, the highest ?-diversity values were observed in regions that showed a greater breadth in latitude and highly heterogeneous environmental conditions and waterbody types (Bolshezemelskaya tundra and Putorana Plateau). Redistribution of freshwater micro-fauna caused by human activities occurred in the 1990s and 2000s. As a result of climate warming, a few cladoceran species appear to have extended their range northward. Nevertheless, the rotifer and micro-crustacean fauna composition and diversity of the majority of Arctic regions generally remain temporally conservative, and spatial differences in composition and species richness are chiefly associated with the differences between the warmer European and colder east Siberian climates. © 2020 John Wiley & Sons Ltd.

Scopus
Держатели документа:
Institute of Biology of Komi Science Centre of the Ural Branch of the Russian Academy of Sciences, Syktyvkar, Russian Federation
Institute of Biophysics of Federal Research Center “Krasnoyarsk Science Center” of Siberian Branch of Russian Academy of Sciences, Krasnoyarsk, Russian Federation
Siberian Federal University, Krasnoyarsk, Russian Federation
Institute of Geology and Petroleum Technologies, Kazan Federal University, Kazan, Russian Federation
Lena Delta Nature Reserve, Tiksi, Sakha Republic, Russian Federation
Finnish Natural History Museum LUOMUS University of Helsinki, Helsinki, Finland

Доп.точки доступа:
Fefilova, E.; Dubovskaya, O.; Frolova, L.; Abramova, E.; Kononova, O.; Nigamatzyanova, G.; Zuev, I.; Kochanova, E.

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Status, trends, and future dynamics of freshwater ecosystems in Europe and Central Asia / R. E. Gozlan [et al.] // Inland Waters. - 2019, DOI 10.1080/20442041.2018.1510271 . - Article in press. - ISSN 2044-2041
Кл.слова (ненормированные):
aquatic -- biodiversity -- conservation -- habitat
Аннотация: This review is part of the Intergovernmental Science-Policy Platform on Biodiversity and Ecosystem Services (IPBES) report on Europe and Central Asia (ECA) and provides a critical assessment of issues facing decision-makers, including freshwater biodiversity and ecosystem trends as well as drivers of change. Freshwater systems are well established as the most threatened ecosystem type in the ECA region, with the quantity and quality of habitats and abundance of many species rapidly declining. Only about half (53%) of the EU's rivers and lakes achieved good ecological status in 2015 (as defined by the Water Framework Directive in terms of the quality of the biological community), and many lakes, ponds, and streams are disappearing as a consequence of agricultural intensification and inefficient irrigation and urbanisation, combined with climate change. The situation regarding freshwater biodiversity remains highly critical in ECA as many species remain threatened with extinction, including >50% of known species for some groups (e.g., molluscs, amphibians). Drivers of ECA freshwater taxa include the destruction or modification of their habitat, including water abstraction, which affects ?89% of all amphibian threatened species and ?26% of threatened freshwater invertebrate species. Of particular concern is the lack of data for freshwater invertebrates. Current status is available for only a minority of species, and the impact of alien invasive species is often unknown, especially in Central Asia. Based on current freshwater biodiversity trends, it is highly unlikely that ECA will achieve either the respective Aichi biodiversity targets by 2020 (i.e., targets 2 to 4, 6 to 12, and 14) or Target 1 of the Biodiversity Strategy. © 2019, © 2019 International Society of Limnology (SIL).

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Держатели документа:
ISEM UMR226, Universite de Montpellier, CNRS, IRD, EPHE, Montpellier, 34090, France
Department of ecology and water resources management, Tashkent Institute of Irrigation and Agricultural Mechanization Engineers, Tashkent, Uzbekistan
Institute of Biophysics, Krasnoyarsk Scientific Center, Krasnoyarsk, Russian Federation
Siberian Federal University, Krasnoyarsk, Russian Federation
Severtsov Institute of Ecology and Evolution, Moscow, Russian Federation
Aquatic Ecology Group, University of Vic–Central University of Catalonia, Vic, Spain
Catalan Institution for Research and Advanced Studies, ICREA, Barcelona, Spain

Доп.точки доступа:
Gozlan, R. E.; Karimov, B. K.; Zadereev, E.; Kuznetsova, D.; Sandra Brucet S, S.

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Morphological specificities of vendace (Salmoniformes: Salmonidae: Coregoninae: Coregonus albula) population in Lake Pleshcheyevo (the Volga River basin): relationships of two phylogenetic lineages in a new zone of secondary contact / E. A. Borovikova, V. S. Artamonova // Org. Divers. Evol. - 2018. - Vol. 18, Is. 3. - P355-366, DOI 10.1007/s13127-018-0375-5. - Cited References:46. - The preparation of this manuscript was supported by the Russian Science Foundation, grant no. 16-14-10001. . - ISSN 1439-6092. - ISSN 1618-1077

РУБ Evolutionary Biology + Zoology
Рубрики:
ECOLOGICAL DIVERGENCE
   SPECIES PAIR
   ORIGIN
   EVOLUTIONARY
   WHITEFISH
Кл.слова (ненормированные):
Vendace -- Morphological characters -- Allopatric origin -- Phylogenetic -- lineages -- Lake Pleshcheyevo
Аннотация: This is the report about the secondary contact zone of coregonids in the Upper Volga basin. Two mitochondrial DNA (mtDNA) phylogenetic lineages of vendace Coregonus albula (Linnaeus, 1758) living in Lake Pleshcheyevo have been analyzed and compared in terms of morphological characters. These lineages have developed under the conditions of allopatry and are characterized by strong differences of the mitochondrial DNA sequences. The lineages have coexisted in the same lake since the last glaciation maximum (about 10,000years ago). The morphological analysis has shown that representatives of both lineages correspond to C. albula, while slight, morphological variations between lineages indicate different food preferences and locomotor abilities. Scenarios where multiple distinct coexisting phylogenetic lineages are characterized by low levels of morpho-ecological divergence are uncommon. These situations are important for understanding biodiversity dynamics and the mechanisms that drive coexistence, adaptive divergence, hybridization, and extinction when genetically divergent lineages meet in secondary contact.

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Scopus
Держатели документа:
RAS, Papanin Inst Biol Inland Waters, Lab Fish Ecol, Borok 152742, Yaroslavl Regio, Russia.
RAS, Siberian Branch, Inst Biophys, Krasnoyarsk 660036, Russia.
RAS, Severtsov Inst Ecol & Evolut, Leninski Prosp 33, Moscow 119071, Russia.

Доп.точки доступа:
Borovikova, Elena A.; Artamonova, Valentina S.; Russian Science Foundation [16-14-10001]

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Ecological features of cyanobacteria and algae communities of the littoral of the meromictic Lake Shira (Khakassia Republic, Russia) / L. A. Gaysina, A. I. Fazlutdinova, N. Mukhina [et al.] // Theor. Appl. Ecol. - 2020. - Is. 1. - P47-50, DOI 10.25750/1995-4301-2020-1-047-050. - Cited References:18. - The study was supported by Russian Foundation for Basic Research in the frame of project 19-05-00428 and an internal grant of M. Akmullah Bashkir State Pedagogical University for the year 2019. This article is published with financial support from the RFBR grant No. 19-04-20031. . - ISSN 1995-4301. - ISSN 2618-8406

РУБ Ecology

Кл.слова (ненормированные):
meromixia -- Bacillariophyta -- alkaliphilic species -- Leptolyngbya -- voronichiniana -- Pseudophormidium pauciramosum -- Desmodesmus abundans -- Oocystis lacustris -- Amphora ovalis -- Grunowia tabellaria -- Surirella -- undulata
Аннотация: During the study of cyanobacteria and algae from littoral of the meromictic Lake Shira (Republic of Khakassia, Russia) forty-eight taxa were identified: Cyanobacteria - 7, Chlorophyta - 5, and Bacillariophyta - 36 species. Cyanobacteria were represented by cosmopolitan taxa Leptolyngbya voronichiniana, cf. Trichocoleus hospitus and widely distributed in the freshwater ecosystems species Phormidium cf. paulsenianum, Pseudophormidium cf. golenkinianum, P. pauciramosum, Leptolyngbya perforans, and L. subtilissima. Among green algae typical freshwater taxa Chloroidium saccharophilum, Desmodesmus abundans, Oocystis lacustris, Chlorella sp., Stigeoclonium sp. were detected. Among Bacillariophyta the most frequent species were Amphora ovalis, Cymbella affinis, Encyonema silesiacum, Eunotia fallax, Gomphonella olivacea, G. parvulum, Kobayasiella subtilissima, Navicula minima, N. radiosa, N. veneta, Nitzchia fonticola, N. palea, Grunowia tabellaria, Surirella undulata. Several rare species cf. Fragilaria tenera, Grunowia tabellaria and cf. Ulnaria capitata were found. In relation to mineralization indifferents was the largest group (73%). In relation to pH, a unique feature of the investigated lake was the predominance of alkaliphilic species of diatoms (56%), such as Amphora ovalis, Cymbella affinis, Gomphonema truncatum, Hantzschia amphioxys, Navicula minima, N. veneta, Nitzschia cf. linearis, N. palea, Planothidium lanceolatum and other. In the geographic structure cosmopolitan group included 25 species (69%), boreal group - 4 species (11%), arcto-apline group - 2 species (6%). To obtain more accurate information on the biodiversity of cyanobacteria and algae of Lake Shira further studies using molecular-genetic and electron microscopic methods are needed.

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Держатели документа:
M Akmullah Bashkir State Pedag Univ, 3-A Oktyabrskoy Revolucii, Ufa 450008, Republic Of Bas, Russia.
All Russian Res Inst Phytopathol, 5 Inst St, Odintsovo Dist 143050, Moscow Region, Russia.
RAS, Inst Biophys, Siberian Branch, 50 Akad Gorodok, Krasnoyarsk 660036, Russia.
Siberian Fed Univ, 79 Svobodny Prospekt, Krasnoyarsk 660041, Russia.
John Carroll Univ, John Carroll Blvd, University Hts, OH 41118 USA.

Доп.точки доступа:
Gaysina, L. A.; Fazlutdinova, A., I; Mukhina, N.; Akhrnadeyeva, L. E.; Rogozin, D. Yu; Bul'khin, A. O.; Sulehanova, N., V; Johansen, J. R.; Russian Foundation for Basic ResearchRussian Foundation for Basic Research (RFBR) [19-05-00428]; internal grant of M. Akmullah Bashkir State Pedagogical University; RFBRRussian Foundation for Basic Research (RFBR) [19-04-20031]

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Advances in the use of molecular tools in ecological and biodiversity assessment of aquatic ecosystems / M. J. Feio, A. F. Filipe, A. Garcia-Raventos [et al.] // Limnetica. - 2020. - Vol. 39: 19th Congress of the Iberian-Association-of-Limnology (AIL) (JUN 24-29, 2018, Coimbra, PORTUGAL), Is. 1. - P419-440, DOI 10.23818/limn.39.27. - Cited References:92. - We are grateful to all participants of the special session "The use of molecular tools in ecological and biodiversity assessment of aquatic ecosystems" for the productive discussions during the AIL 2018 meeting (XIX Iberian Association of Limnology meeting in Coimbra (Portugal, June 2018). M.J. Feio is supported by MARE strategic program (UID/MAR/04292/2013); SFP Almeida is supported by GeoBioTec strategic program UID/GEO/04035/2019. R. Cordeiro was supported by a Ph.D. Grant (M3.1.a/F/017/2011) from Fundo Regional da Ciencia e Tecnologia (FRCT); A.F. Filipe and A. Garcia-Raventos were supported by FRESHING Project "Next-generation biomonitoring: freshwater bioassessment and species conservation improved with metagenomics" funded by the Portuguese Foundation for Science and Technology (FCT) and COMPETE (PTDC/AAG-MAA/2261/2014 -POCI-01-0145-FEDER-356 016824); F.M.S. Martins was supported by a FCT PhD grant (SFRH/BD/104703/2014); A.R. Calapez was supported by a grant from the FCT-PhD programme FLUVIO (PD\BD\52510\2014); A.M. Pujante acknowledges the BIOWAT-KIT_E!11892 Eurostars project; Maria Fais and Sofia Duarte were supported, respectively, by a PhD (SFRH/BD/113547/2015) and a post-doc fellowship (SFRH/BPD/109842/2015), from FCT; and C. Murria acknowledges the Fundacio Aigues de Barcelona for funding his research. . - ISSN 0213-8409. - ISSN 1989-1806

РУБ Limnology + Marine & Freshwater Biology
Рубрики:
BARCODE REFERENCE LIBRARY
METABARCODING APPROACH
RAPID ASSESSMENT
Кл.слова (ненормированные):
eDNA -- metabarcoding -- conservation -- ecological quality -- species -- detection -- rivers -- lakes -- thermal springs -- estuaries -- lagoons
Аннотация: Conservation and sustainable management of aquatic ecosystems is a priority in environmental programs worldwide. However, these aims are highly dependent on the efficiency, accuracy and cost of existent methods for the detection of keystone species and monitoring of biological communities. Rapid advances in eDNA, barcoding and metabarcoding promoted by high-throughput sequencing technologies are generating millions of sequences in a fast way, with a promising cost reduction, and overcoming some difficulties of the traditional taxonomic approaches. This paper provides an updated broad perspective of the current developments in this dynamic field presented in the special session (SS) "The use of molecular tools in ecological and biodiversity assessment of aquatic ecosystems" of the XIX Congress of the Iberian Association of Limnology (AIL2018), held in Coimbra, Portugal. Developments presented are mainly focused on the Iberian Peninsula (Portugal and Spain, including Atlantic Macaronesian islands) but include studies in France, Germany, Finland, Russia (Siberia) and South America. The networks within which these researchers are involved are yet even broader, profiting from existing molecular facilities, and traditional taxonomic expertise, which can be viewed as a characteristic of this new research area. It was evident in the SS that the use of molecular tools is widespread, being used to study a diversity of aquatic systems, from rivers' headwaters to estuaries and coastal lagoons, and volcanic, mountain and frozen lakes to hot springs. The organisms targeted are likewise varied and include fish, macroinvertebrates, meiofauna, microalgae such as diatoms and dinoflagellates, other protists, fungi, and bacteria (cyanobacteria and other). Some studies address the whole biodiversity (i.e., all species present independently of the taxonomic group) from environmental samples of water, biofilms and preservative solution from field samples (e.g., ethanol from macroinvertebrate samples). Great advances were acknowledged in the special session, namely in the use of metabarcoding for detecting hidden biodiversity, juvenile stages, low-abundance species, non-indigenous species and toxicity potential, and ultimately for ecological monitoring of diatoms and invertebrates. Yet, several drawbacks were highlighted and need further work, which include: taxonomic gaps in the reference databases (including gaps at species level and on intraspecific variability) or absence of public databases (e.g. for meiofauna), still high sequencing costs, the need of a substantial bioinformatics effort, difficulties in establishing the amount of environmental sample necessary for a good DNA extraction and the need for testing different genetic markers to obtain accurate results.

WOS
Держатели документа:
Marine & Environm Sci Ctr MARE, Coimbra, Portugal.
Univ Coimbra, Fac Sci & Technol, Dept Life Sci, Coimbra, Portugal.
Univ Porto, CIBIO InBio, Ctr Invest Biodiversidade & Recursos Genet, Campus Vairdo,Vila Conde, Porto, Portugal.
Univ Lisbon, Inst Super Agron, Ctr Invest Biodiversidade & Recursos Genet, CIBIO InBio, Lisbon, Portugal.
Univ Oviedo, Dept Funct Biol, C Julian Claveria S-N, E-33006 Oviedo, Spain.
Univ Lisbon, Sch Agr, Linking Landscape Environm Agr & Food LEAF, Lisbon, Portugal.
Labs Tecnol Levante SL, Avda Benjamin Franklin 16, Valencia 46980, Spain.
Univ Aveiro, Dept Biol & GeoBioTec GeoBioSci, GeoTechnol & GeoEngn Res Ctr, Campus Santiago, P-3810193 Aveiro, Portugal.
Univ Barcelona, Grup Recerca Freshwater Ecol Hydrol & Management, Avinguda Diagonal 643, E-08028 Barcelona, Spain.
Univ Barcelona, Inst Recerca Biodiversitat IRBio, Dept Biol Evolut Ecol & Ciencies Ambientals, Fac Biol, Avinguda Diagonal 643, E-08028 Barcelona, Spain.
Siberian Fed Univ, Fac Biol & Biotechnol, Dept Aquat & Terr Ecosyst, Svobodnyy 79, Krasnoyarsk 660041, Russia.
Univ Porto, Dept Biol, Fac Ciencias, Porto, Portugal.
Univ Minho, Ctr Mol & Environm Biol CBMA, Dept Biol, Campus Gualtar, P-4710057 Braga, Portugal.
Univ Cantabria, Environm Hydraul Inst, C Isabel Torres 15, Santander 39011, Spain.
Univ Acores, InBIO Lab Associado, Ctr Invest Biodiversidade & Recursos Genet, CIBIO,Fac Ciencias & Tecnol, P-9501801 Ponta Delgada, Portugal.
Univ Savoie Mt Blanc, INRA, CARRTEL, 75 Av Corzent, F-74200 Thonon Les Bains, France.
Univ Oulu, Dept Ecol & Genet, Stream Ecol Res Grp, Oulu, Finland.
CSIC, Natl Museum Nat Sci, Spanish Natl Res Council, Calle Jose Gutierrez Abascal 2, E-28006 Madrid, Spain.
Allgenetics, Edificio CICA,Campus Elvilia S-N, E-15008 La Coruna, Spain.
FAUNATICA, Kutojantie 11, Espoo, Finland.
Res Inst Ecosyst Anal & Assessment, Kackertstr 10, D-52072 Aachen, Germany.
Russian Acad Sci BI SB RAN, Biophys Inst, Siberian Branch, 50 Akad Gorodok,Str 50, Krasnoyarsk 660036, Russia.
Univ Perpignan, EPHE UPVD CNRS, 52 Ave Paul Alduy, F-66860 Perpignan, France.
CRIOBE, Lab Excellence Corail, BP 1013, Moorea, French Polynesi, France.

Доп.точки доступа:
Feio, Maria Joao; Filipe, Ana Filipa; Garcia-Raventos, Aina; Ardura, Alba; Calapez, Ana Raquel; Pujante, Ana Maria; Mortagua, Andreia; Murria, Cesc; Diaz-de-Quijano, Daniel; Martins, Filipa M. S.; Duarte, Sofia; Bariain, Marta Sainz; Cordeiro, Rita; Rivera, Sinziana F.; Vaisanen, Leif O. S.; Fonseca, Amelia; Goncalves, Vitor; Garcia-Vazquez, Eva; Rodriguez, David Vieites; Ivanova, Elena A.; Costa, Filipe O.; Barquin, Jose; Rojo, Veronica; Vierna, Joaquin; Fais, Maria; Suarez, Marcos; Nieminen, Marko; Hammers-Wirtz, Monica; Kolmakova, Olesia, V; Trusova, Maria Y.; Beja, Pedro; Gonzalez, Raquel; Planes, Serge; Almeida, Salome F. P.; MARE strategic program [UID/MAR/04292/2013]; GeoBioTec strategic program [UID/GEO/04035/2019]; Fundo Regional da Ciencia e Tecnologia (FRCT) [M3.1.a/F/017/2011]; FRESHING Project "Next-generation biomonitoring: freshwater bioassessment and species conservation improved with metagenomics" - Portuguese Foundation for Science and Technology (FCT); COMPETE [PTDC/AAG-MAA/2261/2014 -POCI-01-0145-FEDER-356 016824]; FCTPortuguese Foundation for Science and Technology [SFRH/BD/104703/2014, SFRH/BD/113547/2015, SFRH/BPD/109842/2015]; FCT-PhD programme FLUVIO [PD\BD\52510\2014]; Eurostars project [BIOWAT-KIT_E!11892]; Fundacio Aigues de Barcelona

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Ecological features of cyanobacteria and algae communities of the littoral of the meromictic Lake Shira (Khakassia Republic, Russia) / L. A. Gaysina, A. I. Fazlutdinova, O. N. Mukhina [et al.] // Theor. Appl. Ecol. - 2020. - Vol. 2020, Is. 1. - P47-50, DOI 10.25750/1995-4301-2020-1-047-050 . - ISSN 1995-4301
Кл.слова (ненормированные):
Alkaliphilic species -- Amphora ovalis -- Bacillariophyta -- Desmodesmus abundans -- Grunowia tabellaria -- Leptolyngbya voronichiniana -- Meromixia -- Oocystis lacustris -- Pseudophormidium pauciramosum -- Surirella undulata
Аннотация: During the study of cyanobacteria and algae from littoral of the meromictic Lake Shira (Republic of Khakassia, Russia) forty-eight taxa were identified: Cyanobacteria - 7, Chlorophyta - 5, and Bacillariophyta - 36 species. Cyanobacteria were represented by cosmopolitan taxa Leptolyngbya voronichiniana, cf. Trichocoleus hospitus and widely distributed in the freshwater ecosystems species Phormidium cf. paulsenianum, Pseudophormidium cf. golenkinianum, P. pauciramosum, Leptolyngbya perforans, and L. subtilissima. Among green algae typical freshwater taxa Chloroidium saccharophilum, Desmodesmus abundans, Oocystis lacustris, Chlorella sp., Stigeoclonium sp. were detected. Among Bacillariophyta the most frequent species were Amphora ovalis, Cymbella affinis, Encyonema silesiacum, Eunotia fallax, Gomphonella olivacea, G. parvulum, Kobayasiella subtilissima, Navicula minima, N. radiosa, N. veneta, Nitzchia fonticola, N. palea, Grunowia tabellaria, Surirella undulata. Several rare species cf. Fragilaria tenera, Grunowia tabellaria and cf. Ulnaria capitata were found. In relation to mineralization indifferents was the largest group (73%). In relation to pH, a unique feature of the investigated lake was the predominance of alkaliphilic species of diatoms (56%), such as Amphora ovalis, Cymbella affinis, Gomphonema truncatum, Hantzschia amphioxys, Navicula minima, N. veneta, Nitzschia cf. linearis, N. palea, Planothidium lanceolatum and other. In the geographic structure cosmopolitan group included 25 species (69%), boreal group - 4 species (11%), arcto-apline group - 2 species (6%). To obtain more accurate information on the biodiversity of cyanobacteria and algae of Lake Shira further studies using molecular-genetic and electron microscopic methods are needed. © 2020 Publishing House "O- Kratkoe". All rights reserved.

Scopus
Держатели документа:
M. Akmullah Bashkir State Pedagogical University, 3-a, Okt'yabrskoy revolucii, Ufa, 450008, Russian Federation
All-Russian Research Institute of Phytopathology, 5, Institute St., B. Vyazyomy, Odintsovo District, Moscow Region, 143050, Russian Federation
Institute of Biophysics Siberian Branch of RAS, 50, Akademgorodok, Krasnoyarsk, 660036, Russian Federation
Siberian Federal University, 79, Svobodny Prospekt, Krasnoyarsk, 660041, Russian Federation
John Carroll University, University Heights, John Carroll Blvd., Ohio, 44118, United States

Доп.точки доступа:
Gaysina, L. A.; Fazlutdinova, A. I.; Mukhina, O. N.; Akhmadeyeva, L. F.; Rogozin, D. Y.U.; Bul'Khin, A. O.; Sukhanova, N. V.; Johansen, J. R.

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10.

РУБ Ecology + Marine & Freshwater Biology
Рубрики:
HIGH-LATITUDE LAKES
   CLIMATE-CHANGE
   SPECIES RICHNESS
   BETA DIVERSITY
Кл.слова (ненормированные):
alpha diversity -- beta diversity -- ecoregions -- latitude -- taxonomic -- richness -- temperature
Аннотация: Arctic freshwaters are facing multiple environmental pressures, including rapid climate change and increasing land-use activities. Freshwater plankton assemblages are expected to reflect the effects of these stressors through shifts in species distributions and changes to biodiversity. These changes may occur rapidly due to the short generation times and high dispersal capabilities of both phyto- and zooplankton. Spatial patterns and contemporary trends in plankton diversity throughout the circumpolar region were assessed using data from more than 300 lakes in the U.S.A. (Alaska), Canada, Greenland, Iceland, the Faroe Islands, Norway, Sweden, Finland, and Russia. The main objectives of this study were: (1) to assess spatial patterns of plankton diversity focusing on pelagic communities; (2) to assess dominant component of beta diversity (turnover or nestedness); (3) to identify which environmental factors best explain diversity; and (4) to provide recommendations for future monitoring and assessment of freshwater plankton communities across the Arctic region. Phytoplankton and crustacean zooplankton diversity varied substantially across the Arctic and was positively related to summer air temperature. However, for zooplankton, the positive correlation between summer temperature and species numbers decreased with increasing latitude. Taxonomic richness was lower in the high Arctic compared to the sub- and low Arctic for zooplankton but this pattern was less clear for phytoplankton. Fennoscandia and inland regions of Russia represented hotspots for, respectively, phytoplankton and zooplankton diversity, whereas isolated regions had lower taxonomic richness. Ecoregions with high alpha diversity generally also had high beta diversity, and turnover was the most important component of beta diversity in all ecoregions. For both phytoplankton and zooplankton, climatic variables were the most important environmental factors influencing diversity patterns, consistent with previous studies that examined shorter temperature gradients. However, barriers to dispersal may have also played a role in limiting diversity on islands. A better understanding of how diversity patterns are determined by colonisation history, environmental variables, and biotic interactions requires more monitoring data with locations dispersed evenly across the circumpolar Arctic. Furthermore, the importance of turnover in regional diversity patterns indicates that more extensive sampling is required to fully characterise the species pool of Arctic lakes.

WOS
Держатели документа:
Norwegian Inst Nat Res, Songsveien 68, NO-0855 Oslo, Norway.
Natl Wildlife Res Ctr, Environm & Climate Change Canada, Ottawa, ON, Canada.
Univ Copenhagen, Freshwater Biol Sect, Dept Biol, Copenhagen O, Denmark.
Univ Alaska Anchorage, Alaska Ctr Conservat Sci, Anchorage, AK USA.
Russian Acad Sci, Inst Biophys, Krasnoyarsk Sci Ctr, Siberian Branch, Krasnoyarsk, Russia.
Siberian Fed Univ, Inst Fundamental Biol & Biotechnol, Krasnoyarsk, Russia.
Russian Acad Sci, Inst Biol, Komi Sci Ctr, Ural Branch, Syktyvkar, Russia.
Univ New Brunswick, Canadian Rivers Inst, Fredericton, NB, Canada.
Univ New Brunswick, Dept Biol, Fredericton, NB, Canada.
Nat Hist Museum Kopavogur, Kopavogur, Iceland.
Norwegian Inst Nat Res, Trondheim, Norway.
Lomonosov Moscow State Univ, Fac Biol, Dept Gen Ecol & Hydrobiol, Moscow, Russia.
State Nat Reserve Wrangel Isl, Pevek, Chukotka Autono, Russia.
Univ Quebec Chicoutimi, Dept Sci Fondamentales, Saguenay, PQ, Canada.
Univ Laval, Ctr Northern Studies CEN, Quebec City, PQ, Canada.
Queens Univ, Dept Biol, Paleoecol Environm Assessment & Res Lab PEARL, Kingston, ON, Canada.
Swedish Univ Agr Sci, Dept Aquat Sci & Assessment, Uppsala, Sweden.
Univ Helsinki, Lammi Biol Stn, Lammi, Finland.

Доп.точки доступа:
Schartau, Ann Kristin; Mariash, Heather L.; Christoffersen, Kirsten S.; Bogan, Daniel; Dubovskaya, Olga P.; Fefilova, Elena B.; Hayden, Brian; Ingvason, Haraldur R.; Ivanova, Elena A.; Kononova, Olga N.; Kravchuk, Elena S.; Lento, Jennifer; Majaneva, Markus; Novichkova, Anna A.; Rautio, Milla; Ruhland, Kathleen M.; Shaftel, Rebecca; Smol, John P.; Vrede, Tobias; Kahilainen, Kimmo K.; RFBRRussian Foundation for Basic Research (RFBR) [20-04-00145_a]

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11.

First circumpolar assessment of Arctic freshwater phytoplankton and zooplankton diversity: Spatial patterns and environmental factors / A. K. Schartau, H. L. Mariash, K. S. Christoffersen [et al.] // Freshw. Biol. - 2021, DOI 10.1111/fwb.13783 . - Article in press. - ISSN 0046-5070
Кл.слова (ненормированные):
ecoregions -- latitude -- taxonomic richness -- temperature -- ? diversity -- ? diversity
Аннотация: Arctic freshwaters are facing multiple environmental pressures, including rapid climate change and increasing land-use activities. Freshwater plankton assemblages are expected to reflect the effects of these stressors through shifts in species distributions and changes to biodiversity. These changes may occur rapidly due to the short generation times and high dispersal capabilities of both phyto- and zooplankton. Spatial patterns and contemporary trends in plankton diversity throughout the circumpolar region were assessed using data from more than 300 lakes in the U.S.A. (Alaska), Canada, Greenland, Iceland, the Faroe Islands, Norway, Sweden, Finland, and Russia. The main objectives of this study were: (1) to assess spatial patterns of plankton diversity focusing on pelagic communities; (2) to assess dominant component of ? diversity (turnover or nestedness); (3) to identify which environmental factors best explain diversity; and (4) to provide recommendations for future monitoring and assessment of freshwater plankton communities across the Arctic region. Phytoplankton and crustacean zooplankton diversity varied substantially across the Arctic and was positively related to summer air temperature. However, for zooplankton, the positive correlation between summer temperature and species numbers decreased with increasing latitude. Taxonomic richness was lower in the high Arctic compared to the sub- and low Arctic for zooplankton but this pattern was less clear for phytoplankton. Fennoscandia and inland regions of Russia represented hotspots for, respectively, phytoplankton and zooplankton diversity, whereas isolated regions had lower taxonomic richness. Ecoregions with high ? diversity generally also had high ? diversity, and turnover was the most important component of ? diversity in all ecoregions. For both phytoplankton and zooplankton, climatic variables were the most important environmental factors influencing diversity patterns, consistent with previous studies that examined shorter temperature gradients. However, barriers to dispersal may have also played a role in limiting diversity on islands. A better understanding of how diversity patterns are determined by colonisation history, environmental variables, and biotic interactions requires more monitoring data with locations dispersed evenly across the circumpolar Arctic. Furthermore, the importance of turnover in regional diversity patterns indicates that more extensive sampling is required to fully characterise the species pool of Arctic lakes. © 2021 The Authors. Freshwater Biology published by John Wiley & Sons Ltd.

Scopus
Держатели документа:
Norwegian Institute for Nature Research, Oslo, Norway
Environment and Climate Change Canada, National Wildlife Research Centre, Ottawa, ON, Canada
Freshwater Biological Section, Department of Biology, University of Copenhagen, Copenhagen O, Denmark
Alaska Center for Conservation Science, University of Alaska Anchorage, Anchorage, AK, United States
Institute of Biophysics, Krasnoyarsk Science Center, Siberian Branch of Russian Academy of Sciences, Krasnoyarsk, Russian Federation
Institute of Fundamental Biology and Biotechnology, Siberian Federal University, Krasnoyarsk, Russian Federation
Institute of Biology, Komi Scientific Centre, Ural Branch of Russian Academy of Sciences, Syktyvkar, Russian Federation
Canadian Rivers Institute and Department of Biology, University of New Brunswick, Fredericton, NB, Canada
Natural History Museum of Kopavogur, Kopavogur, Iceland
Norwegian Institute for Nature Research, Trondheim, Norway
Department of General Ecology and Hydrobiology, Biological Faculty, Lomonosov Moscow State University, Moscow, Russian Federation
State Nature Reserve Wrangel Island, Pevek, Chukotka Autonomous Region, Russian Federation
Departement des sciences fondamentales, Universite du Quebec a Chicoutimi, Saguenay, QC, Canada
Centre for Northern Studies (CEN), Universite Laval, Quebec City, QC, Canada
Paleoecological Environmental Assessment and Research Laboratory (PEARL), Department of Biology, Queen’s University, Kingston, ON, Canada
Department of Aquatic Sciences and Assessment, Swedish University of Agricultural Sciences, Uppsala, Sweden
Lammi Biological Station, University of Helsinki, Lammi, Finland

Доп.точки доступа:
Schartau, A. K.; Mariash, H. L.; Christoffersen, K. S.; Bogan, D.; Dubovskaya, O. P.; Fefilova, E. B.; Hayden, B.; Ingvason, H. R.; Ivanova, E. A.; Kononova, O. N.; Kravchuk, E. S.; Lento, J.; Majaneva, M.; Novichkova, A. A.; Rautio, M.; Ruhland, K. M.; Shaftel, R.; Smol, J. P.; Vrede, T.; Kahilainen, K. K.

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12.

Single-cell genomics-based analysis reveals a vital ecological role of thiocapsa sp. LSW in the meromictic Lake Shunet, Siberia / Y.-T. Wu, P.-W. Chiang, K. Tandon [et al.] // Microb. Genomics. - 2021. - Vol. 7, Is. 12. - Ст. 000712, DOI 10.1099/mgen.0.000712 . - ISSN 2057-5858
Кл.слова (ненормированные):
Flow cytometry -- Lake Shunet -- Purple sulfur bacteria -- Single-cell genomics -- genomic DNA -- RNA 16S -- Article -- bioinformatics -- carbon metabolism -- Enterobacter -- fluorescence activated cell sorting -- gene amplification -- gene ontology -- high throughput sequencing -- metagenomics -- microbial community -- microbial diversity -- molecular genetics -- nitrogen metabolism -- nonhuman -- nucleotide sequence -- phylogenetic tree -- phylogeny -- polymerase chain reaction -- Sanger sequencing -- Thiocapsa
Аннотация: Meromictic lakes usually harbour certain prevailing anoxygenic phototrophic bacteria in their anoxic zone, such as the purple sulfur bacterium (PSB) Thiocapsa sp. LSW (hereafter LSW) in Lake Shunet, Siberia. PSBs have been suggested to play a vital role in carbon, nitrogen and sulfur cycling at the oxic–anoxic interface of stratified lakes; however, the ecological significance of PSBs in the lake remains poorly understood. In this study, we explored the potential ecological role of LSW using a deep-sequencing analysis of single-cell genomics associated with flow cytometry. An approximately 2.7 Mb draft genome was obtained based on the co-assembly of five single-cell genomes. LSW might grow photolithoautotrophically and could play putative roles not only as a carbon fixer and diazotroph, but also as a sulfate reducer/oxidizer in the lake. This study provides insights into the potential ecological role of Thiocapsa sp. in meromictic lakes. © 2021 The Authors.

Scopus
Держатели документа:
Department of Forestry, National Pingtung University of Science and Technology, Pingtung, 91201, Taiwan
Biodiversity Research Center, Academia Sinica, Taipei, 115, Taiwan
Institute of Biophysics, Siberian Division of the Russian Academy of Sciences, Krasnoyarsk, Russian Federation
Siberian Federal University, Krasnoyarsk, Russian Federation

Доп.точки доступа:
Wu, Y. -T.; Chiang, P. -W.; Tandon, K.; Rogozin, D. Y.; Degermendzhy, A. G.; Tang, S. -L.

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13.

Data on taxa composition of freshwater zooplankton and meiobenthos across Arctic regions of Russia / E. Fefilova, O. Dubovskaya, O. Kononova [et al.] // Data Brief. - 2021. - Vol. 36. - Ст. 107112, DOI 10.1016/j.dib.2021.107112. - Cited References:17. - The work was performed in part as Federal Tasks to the Department of Animal Ecology of the Institute of Biology of Komi Science Centre of the Ural Branch of the Russian Academy of Sciences (AAAA-A17-117112850235-2) (to EF and OK), to the Institute of Biophysics of the Federal Research Center "Krasnoyarsk Science Center" of the Siberian Branch of the Russian Academy of Sciences (project No. 51.1.1) and the Siberian Federal University (project No. FSRZ-2020-0006) (to OD). The paleolimnological part of this work was supported by grant from Russian Science Foundation (project 20-17-00135). L. Frolova and G. Nigamatzyanova were supported by the subsidy allocated to Kazan Federal University for the state assignment #671-2020-0049 in the sphere of scientific activities and by the Russian Foundation for Basic Research (grant 18-05-00406). The work was partly financially supported by the Russian Foundation for Basic Research (RFBR) grant: 20-04-00145_a (to EF). Monitoring investigations in the Lena River Delta were conducted under the framework of Russian-German, "Lena" expeditions (Alfred Wegener Institute, Potsdam, Germany) with logistic and technical support of Scientific Research Station "Samoylov Island" (the Trofimuk Institute of Petroleum-Gas, Geology and Geophysics SB RAS, Novosibirsk) (to EA). . - ISSN 2352-3409

РУБ Multidisciplinary Sciences
Рубрики:
CRUSTACEA
RECORDS
LAKES
Кл.слова (ненормированные):
Arctic -- Fresh waters -- Rotifers -- Cladocerans -- Copepods -- Zooplankton -- Meiobenthos -- Species list
Аннотация: We present the presence/absence species list (Table 1) of rotifer, cladoceran, and copepod (Calanoida, Harpacticoida, and Cyclopoida) fauna from seven Arctic regions of Russia (the Kola Peninsula, the Pechora River Delta, the Bolshezemelskaya tundra, the Polar Ural, the Putorana Plateau, the Lena River Delta, and the Indigirka River Basin) based on our own and literature data. Our own records were obtained by analyzing samples of zooplankton, meiobenthos, and two cores of bottom sediments (from the Kola Peninsula and the Bolshezemelskaya tundra lakes) that we collected once in July or August in 1992, 1995-2017. To supplement the list, we used relevant literature with periods of research from the 1960s to the 2010s. The list is almost identical to "Dataset 2: Zooplankton and Meiofauna across Arctic Regions of Russia", which was analyzed but not published in [1]. The detailed analysis of this list revealed the specific composition of the aquatic fauna associated with the climatic and geographical factors [1]. The data provide information on the current state of biodiversity and species richness in Arctic fresh waters and can serve as the basis for monitoring these environments and predicting how they are likely to change in the future. (C) 2021 The Author(s). Published by Elsevier Inc.

WOS
Держатели документа:
Russian Acad Sci, Ural Branch, Komi Sci Ctr, Inst Biol, Kommunist Skaya 28, Syktyvkar 167982, Russia.
Russian Acad Sci, Krasnoyarsk Sci Ctr, Fed Res Ctr, Inst Biophys,Siberian Branch, Akademgorodok 50-50, Krasnoyarsk 660036, Russia.
Siberian Fed Univ, Svobodny Av 79, Krasnoyarsk 660041, Russia.
Kazan Fed Univ, Inst Geol & Petr Technol, Kremlyovskaya 18, Kazan 420008, Russia.
Lena Delta Nat Reserve, Ak Fedorova 28, Tiksi 678400, Sakha Republic, Russia.

Доп.точки доступа:
Fefilova, Elena; Dubovskaya, Olga; Kononova, Olga; Frolova, Larisa; Abramova, Ekaterina; Nigamatzyanova, Gulnara; Institute of Biophysics of the Federal Research Center "Krasnoyarsk Science Center" of the Siberian Branch of the Russian Academy of Sciences [51.1.1]; Siberian Federal University [FSRZ-2020-0006]; Russian Science FoundationRussian Science Foundation (RSF) [20-17-00135]; Kazan Federal University [671-2020-0049]; Russian Foundation for Basic ResearchRussian Foundation for Basic Research (RFBR) [18-05-00406]; Russian Foundation for Basic Research (RFBR)Russian Foundation for Basic Research (RFBR) [20-04-00145_a]

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14.

Spatial and temporal variation in Arctic freshwater chemistry—Reflecting climate-induced landscape alterations and a changing template for biodiversity / B. J. Huser, M. N. Futter, D. Bogan [et al.] // Freshw. Biol. - 2020, DOI 10.1111/fwb.13645 . - Article in press. - ISSN 0046-5070
Кл.слова (ненормированные):
biogeochemistry -- eutrophication -- lakes -- oligotrophication -- rivers
Аннотация: Freshwater chemistry across the circumpolar region was characterised using a pan-Arctic data set from 1,032 lake and 482 river stations. Temporal trends were estimated for Early (1970–1985), Middle (1986–2000), and Late (2001–2015) periods. Spatial patterns were assessed using data collected since 2001. Alkalinity, pH, conductivity, sulfate, chloride, sodium, calcium, and magnesium (major ions) were generally higher in the northern-most Arctic regions than in the Near Arctic (southern-most) region. In particular, spatial patterns in pH, alkalinity, calcium, and magnesium appeared to reflect underlying geology, with more alkaline waters in the High Arctic and Sub Arctic, where sedimentary bedrock dominated. Carbon and nutrients displayed latitudinal trends, with lower levels of dissolved organic carbon (DOC), total nitrogen, and (to a lesser extent) total phosphorus (TP) in the High and Low Arctic than at lower latitudes. Significantly higher nutrient levels were observed in systems impacted by permafrost thaw slumps. Bulk temporal trends indicated that TP was higher during the Late period in the High Arctic, whereas it was lower in the Near Arctic. In contrast, DOC and total nitrogen were both lower during the Late period in the High Arctic sites. Major ion concentrations were higher in the Near, Sub, and Low Arctic during the Late period, but the opposite bulk trend was found in the High Arctic. Significant pan-Arctic temporal trends were detected for all variables, with the most prevalent being negative TP trends in the Near and Sub Arctic, and positive trends in the High and Low Arctic (mean trends ranged from +0.57%/year in the High/Low Arctic to ?2.2%/year in the Near Arctic), indicating widespread nutrient enrichment at higher latitudes and oligotrophication at lower latitudes. The divergent P trends across regions may be explained by changes in deposition and climate, causing decreased catchment transport of P in the south (e.g. increased soil binding and trapping in terrestrial vegetation) and increased P availability in the north (deepening of the active layer of the permafrost and soil/sediment sloughing). Other changes in concentrations of major ions and DOC were consistent with projected effects of ongoing climate change. Given the ongoing warming across the Arctic, these region-specific changes are likely to have even greater effects on Arctic water quality, biota, ecosystem function and services, and human well-being in the future. © 2020 The Authors. Freshwater Biology published by John Wiley & Sons Ltd.

Scopus
Держатели документа:
Department of Aquatic Sciences and Assessment, Swedish University of Agricultural Sciences, Uppsala, Sweden
Alaska Center for Conservation Science, University of Alaska Anchorage, Anchorage, AK, United States
Norwegian Water Resources & Energy Directorate, Oslo, Norway
Natural History Museum, University of Oslo, Oslo, Norway
Cold Regions Research Centre, Wilfrid Laurier University, Waterloo, ON, Canada
Institute of Biophysics, Siberian Branch of Russian Academy of Sciences, Krasnoyarsk, Russian Federation
Department of Ecology and Environmental Science, Climate Impacts Research Centre, Umea University, Abisko, Sweden
Paleoecological Environmental Assessment and Research Laboratory (PEARL), Department of Biology, Queen’s University, Kingston, ON, Canada
Norwegian Institute for Nature Research, Oslo, Norway
Canadian Rivers Institute and Department of Biology, University of New Brunswick, Fredericton, NB, Canada

Доп.точки доступа:
Huser, B. J.; Futter, M. N.; Bogan, D.; Brittain, J. E.; Culp, J. M.; Goedkoop, W.; Gribovskaya, I.; Karlsson, J.; Lau, D. C.P.; Ruhland, K. M.; Schartau, A. K.; Shaftel, R.; Smol, J. P.; Vrede, T.; Lento, J.

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15.

Spatial and temporal variation in Arctic freshwater chemistry-Reflecting climate-induced landscape alterations and a changing template for biodiversity / B. J. Huser, M. N. Futter, D. Bogan [et al.] // Freshw. Biol. - 2020, DOI 10.1111/fwb.13645. - Cited References:98. - Environment and Climate Change Canada; Cumulative Impact Monitoring Program, Government of Northwest Territories . - Article in press. - ISSN 0046-5070. - ISSN 1365-2427

РУБ Ecology + Marine & Freshwater Biology
Рубрики:
DISSOLVED ORGANIC-CARBON
PERMAFROST THAW
CHEMICAL LIMNOLOGY
Кл.слова (ненормированные):
biogeochemistry -- eutrophication -- lakes -- oligotrophication -- rivers
Аннотация: Freshwater chemistry across the circumpolar region was characterised using a pan-Arctic data set from 1,032 lake and 482 river stations. Temporal trends were estimated for Early (1970-1985), Middle (1986-2000), and Late (2001-2015) periods. Spatial patterns were assessed using data collected since 2001. Alkalinity, pH, conductivity, sulfate, chloride, sodium, calcium, and magnesium (major ions) were generally higher in the northern-most Arctic regions than in the Near Arctic (southern-most) region. In particular, spatial patterns in pH, alkalinity, calcium, and magnesium appeared to reflect underlying geology, with more alkaline waters in the High Arctic and Sub Arctic, where sedimentary bedrock dominated. Carbon and nutrients displayed latitudinal trends, with lower levels of dissolved organic carbon (DOC), total nitrogen, and (to a lesser extent) total phosphorus (TP) in the High and Low Arctic than at lower latitudes. Significantly higher nutrient levels were observed in systems impacted by permafrost thaw slumps. Bulk temporal trends indicated that TP was higher during the Late period in the High Arctic, whereas it was lower in the Near Arctic. In contrast, DOC and total nitrogen were both lower during the Late period in the High Arctic sites. Major ion concentrations were higher in the Near, Sub, and Low Arctic during the Late period, but the opposite bulk trend was found in the High Arctic. Significant pan-Arctic temporal trends were detected for all variables, with the most prevalent being negative TP trends in the Near and Sub Arctic, and positive trends in the High and Low Arctic (mean trends ranged from +0.57%/year in the High/Low Arctic to -2.2%/year in the Near Arctic), indicating widespread nutrient enrichment at higher latitudes and oligotrophication at lower latitudes. The divergent P trends across regions may be explained by changes in deposition and climate, causing decreased catchment transport of P in the south (e.g. increased soil binding and trapping in terrestrial vegetation) and increased P availability in the north (deepening of the active layer of the permafrost and soil/sediment sloughing). Other changes in concentrations of major ions and DOC were consistent with projected effects of ongoing climate change. Given the ongoing warming across the Arctic, these region-specific changes are likely to have even greater effects on Arctic water quality, biota, ecosystem function and services, and human well-being in the future.

WOS
Держатели документа:
Swedish Univ Agr Sci, Dept Aquat Sci & Assessment, Box 7050, S-75007 Uppsala, Sweden.
Univ Alaska Anchorage, Alaska Ctr Conservat Sci, Anchorage, AK USA.
Norwegian Water Resources & Energy Directorate, Oslo, Norway.
Univ Oslo, Nat Hist Museum, Oslo, Norway.
Wilfrid Laurier Univ, Cold Regions Res Ctr, Waterloo, ON, Canada.
Russian Acad Sci, Siberian Branch, Inst Biophys, Krasnoyarsk, Russia.
Umea Univ, Climate Impacts Res Ctr, Dept Ecol & Environm Sci, Umea, Sweden.
Queens Univ, Dept Biol, Paleoecol Environm Assessment & Res Lab PEARL, Kingston, ON, Canada.
Norwegian Inst Nat Res, Oslo, Norway.
Univ New Brunswick, Canadian Rivers Inst, Fredericton, NB, Canada.
Univ New Brunswick, Dept Biol, Fredericton, NB, Canada.

Доп.точки доступа:
Huser, Brian J.; Futter, Martyn N.; Bogan, Daniel; Brittain, John E.; Culp, Joseph M.; Goedkoop, Willem; Gribovskaya, Iliada; Karlsson, Jan; Lau, Danny C. P.; Ruhland, Kathleen M.; Schartau, Ann Kristin; Shaftel, Rebecca; Smol, John P.; Vrede, Tobias; Lento, Jennifer; Environment and Climate Change Canada; Cumulative Impact Monitoring Program, Government of Northwest Territories

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16.

Allochthonous and Autochthonous Food Sources for Zoobenthos in a Forest Stream / V. V. Bogatov, N. N. Sushchik, O. N. Makhutova [et al.] // Russ. J. Ecol. - 2021. - Vol. 52, Is. 3. - P253-256, DOI 10.1134/S1067413621030048 . - ISSN 1067-4136
Кл.слова (ненормированные):
carbon -- feeding -- forest stream -- gammarids -- leaf litter -- pediciid larvae (Pediciidat) -- periphyton -- polyunsaturated fatty acids -- allochthon -- food availability -- freshwater environment -- stream -- zoobenthos

Scopus
Держатели документа:
Federal Scientific Center of the East Asia Terrestrial Biodiversity, Far Eastern Branch, Russian Academy of Sciences, Vladivostok, 690022, Russian Federation
Institute of Biophysics, Krasnoyarsk Scientific Center, Siberian Branch, Russian Academy of Sciences, Krasnoyarsk, 660036, Russian Federation
Siberian Federal University, Krasnoyarsk, 660041, Russian Federation

Доп.точки доступа:
Bogatov, V. V.; Sushchik, N. N.; Makhutova, O. N.; Kolmakova, A. A.; Gladyshev, M. I.

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17.

Data on taxa composition of freshwater zooplankton and meiobenthos across Arctic regions of Russia / E. Fefilova, O. Dubovskaya, O. Kononova [et al.] // Data Brief. - 2021. - Vol. 36. - Ст. 107112, DOI 10.1016/j.dib.2021.107112 . - ISSN 2352-3409
Кл.слова (ненормированные):
Arctic -- Cladocerans -- Copepods -- Fresh waters -- Meiobenthos -- Rotifers -- Species list -- Zooplankton
Аннотация: We present the presence/absence species list (Table 1) of rotifer, cladoceran, and copepod (Calanoida, Harpacticoida, and Cyclopoida) fauna from seven Arctic regions of Russia (the Kola Peninsula, the Pechora River Delta, the Bolshezemelskaya tundra, the Polar Ural, the Putorana Plateau, the Lena River Delta, and the Indigirka River Basin) based on our own and literature data. Our own records were obtained by analyzing samples of zooplankton, meiobenthos, and two cores of bottom sediments (from the Kola Peninsula and the Bolshezemelskaya tundra lakes) that we collected once in July or August in 1992, 1995–2017. To supplement the list, we used relevant literature with periods of research from the 1960s to the 2010s. The list is almost identical to “Dataset 2: Zooplankton and Meiofauna across Arctic Regions of Russia”, which was analyzed but not published in [1]. The detailed analysis of this list revealed the specific composition of the aquatic fauna associated with the climatic and geographical factors [1]. The data provide information on the current state of biodiversity and species richness in Arctic fresh waters and can serve as the basis for monitoring these environments and predicting how they are likely to change in the future. © 2021

Scopus
Держатели документа:
Institute of Biology of Komi Science Centre of the Ural Branch of the Russian Academy of Sciences, Kommunisticheskaya 28, Syktyvkar, 167982, Russian Federation
Institute of Biophysics of Federal Research Center “Krasnoyarsk Science Center” of Siberian Branch of Russian Academy of Sciences, Akademgorodok 50/50, Krasnoyarsk, 660036, Russian Federation
Siberian Federal University, Svobodny av. 79, Krasnoyarsk, 660041, Russian Federation
Institute of Geology and Petroleum Technologies, Kazan Federal University, Kremlyovskaya 18, Kazan, 420008, Russian Federation
Lena Delta Nature Reserve, Ak. Fedorova 28, Sakha Republic, Tiksi 678400, Russian Federation

Доп.точки доступа:
Fefilova, E.; Dubovskaya, O.; Kononova, O.; Frolova, L.; Abramova, E.; Nigamatzyanova, G.

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18.

Methanolobus psychrotolerans sp. nov., a psychrotolerant methanoarchaeon isolated from a saline meromictic lake in siberia / S. -C. Chen [et al.] // Int. J. Syst. Evol. Microbiol. - 2018. - Vol. 68, Is. 4. - P1378-1383, DOI 10.1099/ijsem.0.002685 . - ISSN 1466-5026
Кл.слова (ненормированные):
Archaea -- Lake shira -- Methanogen -- Methanolobus -- Psychrotolerant -- Saline meromictic lake
Аннотация: A psychrotolerant, methylotrophic methanogen, strain YSF-03T, was isolated from the saline meromictic Lake Shira in Siberia. Cells of strain YSF-03T were non-motile, irregular cocci and 0.8–1.2?m in diameter. The methanogenic substrates utilized by strain YSF-03T were methanol and trimethylamine. The temperature range of growth for strain YSF-03T was from 0 to 37 °C. The optimum growth conditions were 30–37 °C, pH 7.0–7.4 and 0.17M NaCl. The G+C content of the genome of strain YSF-03T was 41.3 mol%. Phylogenetic analysis revealed that strain YSF-03T was most closely related to Methanolobus profundi MobMT (98.15% similarity in 16S rRNA gene sequence). Genome relatedness between strain YSF-03T and MobMT was computed using the Genome-to-Genome Distance Calculator and average nucleotide identity, which gave values of 23.5 and 79.3 %, respectively. Based on the morphological, phenotypic, phylogenetic and genomic relatedness data presented here, it is evident that strain YSF-03T represents a novel species of the genus Methanolobus, for which the name Methanolobus psychrotolerans sp. nov. is proposed. The type strain is YSF-03T (=BCRC AR10049T=DSM 104044T=NBRC 112514T). © 2018 IUMS.

Scopus,
Смотреть статью,
WOS
Держатели документа:
Department of Life Science, National Chung Hsing University, Taiwan
Agricultural Biotechnology Center, National Chung Hsing University, Taiwan
Biodiversity Research Center, Academia Sinica, Taiwan
Institute of Biophysics Siberian Branch, Russian Academy of Sciences, Krasnoyarsk, Russian Federation
Siberian Federal University, Krasnoyarsk, Russian Federation

Доп.точки доступа:
Chen, S. -C.; Huang, H. -H.; Lai, M. -C.; Weng, C. -Y.; Chiu, H. -H.; Tang, S. -L.; Rogozin, D. Y.; Degermendzhy, A. G.

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19.

Testing soil-like substrate for growing plants in bioregenerative life support systems / J. B. Gros [et al.] // Advances in Space Research. - 2005. - Vol. 36, Is. 7. - P1312-1318, DOI 10.1016/j.asr.2005.05.079 . - ISSN 0273-1177
Кл.слова (ненормированные):
Life support system -- Matter recycling -- Plants -- Soil-like substrate -- Biodiversity -- Correlation methods -- Growth kinetics -- Hormones -- Plants (botany) -- Recycling -- Soils -- Bioregeneration -- Life support system -- Matter recycling -- Soil-like substrate -- Space research
Аннотация: We studied soil-like substrate (SLS) as a potential candidate for plant cultivation in bioregenerative life support systems (BLSS). The SLS was obtained by successive conversion of wheat straw by oyster mushrooms and worms. Mature SLS contained 9.5% humic acids and 4.9% fulvic acids. First, it was shown that wheat, bean and cucumber yields as well as radish yields when cultivated on mature SLS were comparable to yields obtained on a neutral substrate (expanded clay aggregate) under hydroponics. Second, the possibility of increasing wheat and radish yields on the SLS was assessed at three levels of light intensity: 690, 920 and 1150 ?mol m-2 s-1 of photosynthetically active radiation (PAR). The highest wheat yield was obtained at 920 ?mol m-2 s-1, while radish yield increased steadily with increasing light intensity. Third, long-term SLS fertility was tested in a BLSS model with mineral and organic matter recycling. Eight cycles of wheat and 13 cycles of radish cultivation were carried out on the SLS in the experimental system. Correlation coefficients between SLS nitrogen content and total wheat biomass and grain yield were 0.92 and 0.97, respectively, and correlation coefficients between nitrogen content and total radish biomass and edible root yield were 0.88 and 0.87, respectively. Changes in hormone content (auxins, gibberellins, cytokinins and abscisic acid) in the SLS during matter recycling did not reduce plant productivity. Quantitative and species compositions of the SLS and irrigation water microflora were also investigated. Microbial community analysis of the SLS showed bacteria from Bacillus, Pseudomonas, Proteus, Nocardia, Mycobacterium, Arthrobacter and Enterobacter genera, and fungi from Trichoderma, Penicillium, Fusarium, Aspergillus, Mucor, Botrytis, and Cladosporium genera. В© 2005 COSPAR. Published by Elsevier Ltd. All rights reserved.

Scopus
Держатели документа:
LGCB, Universite B. Pascal, CUST, BP206, 63174 Aubiere cedex, France
Environmental Control and Life Support Section, ESA-Estec, Postbus 299, 2200 AG, Noordwijk, Netherlands
Institute of Biophysics (Russian Academy of Sciences, Siberian Branch), Academgorodok, Krasnoyarsk 660036, Russian Federation
Department of Plant Physiology and Biotechnology, Tomsk State University, Lenin av. 36, Tomsk 634050, Russian Federation : 660036, Красноярск, Академгородок, д. 50, стр. 50

Доп.точки доступа:
Gros, J.B.; Lasseur, Ch.; Tikhomirov, A.A.; Manukovsky, N.S.; Kovalev, V.S.; Ushakova, S.A.; Zolotukhin, I.G.; Tirranen, L.S.; Karnachuk, R.A.; Dorofeev, V.Yu.

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20.

The vertical distribution of zooplankton in brackish meromictic lake with deep-water chlorophyll maximum / Y. S. Zadereev, A. P. Tolomeyev // Hydrobiologia. - 2007. - Vol. 576, Is. 1. - P69-82, DOI 10.1007/s10750-006-0294-x . - ISSN 0018-8158
Кл.слова (ненормированные):
Anoxic hypolimnion -- Deep water chlorophyll maximum -- Meromictic lake -- Stratification -- Vertical distribution -- Zooplankton -- Algae -- Chlorophyll -- Growth kinetics -- Lakes -- Saline water -- Anoxic hypolimnion -- Deep water chlorophyll maximum -- Meromictic lake -- Stratification -- Vertical distribution -- Zooplanktons -- Biodiversity -- biomass -- brackish water -- chlorophyll -- green alga -- meromictic lake -- reproduction -- stratification -- vertical distribution -- zooplankton -- Eurasia -- Khakassia -- Lake Shira -- Russian Federation -- Arctodiaptomus salinus -- Brachionus plicatilis -- Chlorophyta -- Copepoda -- Hexarthra oxiuris -- Rotifera
Аннотация: We examined the dynamics of the vertical stratification of physical, chemical and biological factors in a brackish meromictic lake with a deep-water chlorophyll maximum (Shira Lake, Russia, Khakasia) during the growing season and estimated how the vertical distribution of these factors influences the vertical distribution of the zooplankton community. The vertical distribution of zooplankton was restricted by the anoxic hypolimnion. Nauplii and younger copepodides (C1-C3) of the copepod, Arctodiaptomus salinus, and the rotifer, Brachionus plicatilis, were found in the upper warm waters. During summer stratification the maximum of A. salinus biomass, which consisted mainly of older copepodides (C4-C5) and females, was associated with the deep-water maximum of biomass of green algae, which are the preferred diet for this species. The vertical distribution of the rotifer Hexarthra oxiuris was bimodal with numerical peaks in the epi- and hypolimnion. Reproduction peaks of dominant species were separated in time. The reproduction peak of A. salinus was at the beginning of summer when A. salinus constituted up to 99% of total zooplankton biomass. The development of rotifers was detected after the reproduction peak of A. salinus when the biomass of rotifers reached 50% of total zooplankton biomass. В© 2007 Springer Science+Business Media B.V.

Scopus
Держатели документа:
Institute of Biophysics SB RAS, Akademgorodok, Krasnoyarsk 660036, Russian Federation : 660036, Красноярск, Академгородок, д. 50, стр. 50

Доп.точки доступа:
Zadereev, Y.S.; Tolomeyev, A.P.

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