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Development of Biodegradable Delivery Systems Containing Novel 1,2,4-Trioxolane Based on Bacterial Polyhydroxyalkanoates / S. Y. Lipaikin, I. A. Yaremenko, A. O. Terent'ev [et al.] // Adv. Polym. Technol. - 2022. - Vol. 2022. - Ст. 6353909, DOI 10.1155/2022/6353909. - Cited References:70. - \his study was financially supported by the project "Agropreparations of the new generation: a strategy of construction and realization" (Agreement No 074-02-2018-328) in accordance with Resolution No 220 of the Government of the Russian Federation of April 9, 2010, "On measures designed to attract leading scientists to the Russian institutions of higher learning." . - ISSN 0730-6679. - ISSN 1098-2329

РУБ Engineering, Chemical + Polymer Science
Рубрики:
IN-VITRO
   BRIDGED 1,2,4,5-TETRAOXANES
   ANTIMALARIAL ACTIVITY
   RELEASE
Аннотация: In this work, delivery systems in the form of microparticles and films containing 1,2,4-trioxolane (ozonide, OZ) based on polyhydroxyalkanoates (PHAs) were developed. Main systems' characteristics were investigated: the particle yield, average diameter, zeta potential, surface morphology, loading capacity, and drug release profile of microparticles, as well as surface morphology and release profiles of OZ-containing films. PHA-based OZ-loaded microparticles have been found to have satisfactory size, zeta potential, and ozonide loading-release behavior. It was noted that OZ content influenced the surface morphology of obtained systems.

WOS
Держатели документа:
Siberian Fed Univ, 79 Svobodnyi Av, Krasnoyarsk 660041, Russia.
Russian Acad Sci, ND Zelinsky Inst Organ Chem, 47 Leninsky Prosp, Moscow 119991, Russia.
Inst Biophys SB RAS, 50-50 Akademgorodok, Krasnoyarsk 660036, Russia.

Доп.точки доступа:
Lipaikin, Sergei Y.; Yaremenko, Ivan A.; Terent'ev, Alexander O.; Volova, Tatiana G.; Shishatskaya, Ekaterina, I; Lipaikin, Sergei; Government of the Russian Federation [074-02-2018-328]

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The Recombinant Luciferase of the Fungus Neonothopanus nambi: Obtaining and Properties / A. Y. Gorokhovatsky, T. V. Chepurnykh, A. S. Shcheglov [et al.] // Dokl. Biochem. Biophys. - 2021. - Vol. 496, Is. 1. - P52-55, DOI 10.1134/S1607672921010051. - Cited References:10. - The work was supported by the Russian Science Foundation (project no. 16-14-00052-P). The creation of the luciferase-producing yeast strain nnLuz was supported by the President's grant for state support of the leading scientific schools of the Russian Federation (NSh-2605.2020.4). . - ISSN 1607-6729. - ISSN 1608-3091

РУБ Biochemistry & Molecular Biology + Biophysics

Кл.слова (ненормированные):
bioluminescence -- luciferase -- nnLuz -- Neonothopanus nambi -- heterologous -- expression -- Pichia pastoris
Аннотация: A key component of the recently described bioluminescent system of higher fungi is luciferase, a new class of proteins. The properties of fungal luciferase and their relationship with its structure are interesting both for improving autoluminescent systems already created on its basis and for creating new ones. Therefore, it is extremely important to understand the spatial structure of this protein. We have performed heterologous expression and purification of Neonothopanus nambi luciferase, obtained a protein suitable for subsequent crystallization, and also determined some biochemical properties of the recombinant luciferase.

WOS
Держатели документа:
Russian Acad Sci, Shemyakin Ovchinnikov Inst Bioorgan Chem, Moscow, Russia.
Russian Acad Sci, Inst Biophys, Fed Res Ctr, Krasnoyarsk Sci Ctr,Siberian Branch, Krasnoyarsk, Russia.

Доп.точки доступа:
Gorokhovatsky, A. Yu; Chepurnykh, T., V; Shcheglov, A. S.; Mokrushina, Yu A.; Baranova, M. N.; Goncharuk, S. A.; Purtov, K., V; Petushkov, V. N.; Rodionova, N. S.; Yampolsky, I., V; Russian Science FoundationRussian Science Foundation (RSF) [16-14-00052-P]; President's grant for state support of the leading scientific schools of the Russian Federation [NSh-2605.2020.4]

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Comparison of rapid methods used to determine the concentration, size structure and species composition of algae / E. S. Zadereev, A. V. Drobotov, T. S. Lopatina [и др.] // J. Sib. Fed. Univ. - Biol. - 2021. - Vol. 14, Is. 1. - С. 5-27, DOI 10.17516/1997-1389-0338 . - ISSN 1997-1389
Кл.слова (ненормированные):
Flow cytometry -- Fluorescence -- Microscopy -- Particle counter -- Phytoplankton -- Size distribution
Аннотация: Traditionally, the abundance, cell size distribution and species identification of algae are determined by microscopic counts. In recent years, various rapid methods have been developed for routine algal studies. However, each of these methods has its drawbacks. It is important for aquatic ecologists to understand the advantages, disadvantages, and limitations of these methods. We compared the sensitivity of three rapid methods (multichannel fluorimeter FluoroProbe, imaging flow cytometer FlowCam, and CASY particle counter) to changes in cell abundance of three algae species (Chlorella vulgaris Beyerinck, Arthrospira platensis Gomont, and Nostoc sp.). We also assessed the ability of rapid methods to estimate the cell abundance of different species in the mixed samples. All instruments showed high sensitivity to changes in the cell abundance of different algae species and a mixture of these species. Any one of these methods, once calibrated, can be reliably used to estimate the abundance of a single-species/laboratory culture of microalgae. At the same time, FlowCam, without preliminary calibration, recorded the cell abundance closest to microscopic counts. When analysing a mixture of three microalgae differing in their cell sizes and spectral characteristics, FluoroProbe showed the highest accuracy in assessing the proportions of species in the mixture and FlowCam - in assessing their abundance. To study mixtures of algae and/or natural phytoplankton communities, it is advisable to use jointly a flow cytometer and a multichannel fluorimeter. The images of algae saved by the flow cytometer, if necessary, can be used to identify them, with a certain accuracy, to the species. Information on cells size and spectral characteristics obtained by two methods will be detailed enough to perform such common tasks as studying trophic interactions between phyto- and zooplankton or creating warning systems to inform of unwanted blooms of phytoplankton and their individual groups (for example, cyanobacteria). © Siberian Federal University. All rights reserved.

Scopus
Держатели документа:
Institute of Biophysics SB RAS, Krasnoyarsk, Russian Federation
Siberian Federal University, Krasnoyarsk, Russian Federation

Доп.точки доступа:
Zadereev, E. S.; Drobotov, A. V.; Lopatina, T. S.; Ovchinnikov, S. D.; Tolomeev, A. P.

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Winter atmospheric nutrient and pollutant deposition on Western Sayan Mountain lakes (Siberia) / DQD Diaz, A. V. Ageev, E. A. Ivanova, O. V. Anishchenko // Biogeosciences. - 2021. - Vol. 18, Is. 5. - P1601-1618, DOI 10.5194/bg-18-1601-2021. - Cited References:86. - This research has been supported by the Russian Foundation for Basic Research (grant no. 20-04-00960) and the Ministry of Science and Higher Education of the Russian Federation (postdoctoral program project no. 5-100, grant no. FSRZ-2020-0014). . - ISSN 1726-4170. - ISSN 1726-4189

РУБ Ecology + Geosciences, Multidisciplinary
Рубрики:
FLY-ASH PARTICLES
NITROGEN DEPOSITION
PHOSPHORUS DEPOSITION
Аннотация: The world map of anthropogenic atmospheric nitrogen deposition and its effects on natural ecosystems is not described with equal precision everywhere. In this paper, we report atmospheric nutrient, sulfate and spheroidal carbonaceous particle (SCP) deposition rates, based on snowpack analyses of a formerly unexplored Siberian mountain region. Then, we discuss their potential effects on lake phytoplankton biomass limitation. We estimate that the nutrient depositions observed in the late-season snowpack (40 +/- 16 mgNO(3)-Nm(-2) and 0.58 +/- 0.13 mg TP-Pm-2; TP for total phosphorous) would correspond to yearly depositions lower than 119 +/- 71 mgNO(3)-Nm(-2) yr(-1) and higher than 1.71 +/- 0.91 mg TP-Pm-2 yr(-1). These yearly deposition estimates would approximately fit the predictions of global deposition models and correspond to the very low nutrient deposition range, although they are still higher than world background values. In spite of the fact that such a low atmospheric nitrogen deposition rate would be enough to induce nitrogen limitation in unproductive mountain lakes, phosphorus deposition was also extremely low, and the resulting lake water N: P ratio was unaffected by atmospheric nutrient deposition. In the end, the studied lakes' phytoplankton appeared to be split between phosphorus and nitrogen limitation. We conclude that these pristine lakes are fragile sensitive systems exposed to the predicted climate warming, increased winter precipitation, enhanced forest fires and shifts in anthropogenic nitrogen emissions that could finally couple their water chemistry to that of atmospheric nutrient deposition and unlock temperature-inhibited responses of phytoplankton to nutrient shifts.

WOS
Держатели документа:
Siberian Fed Univ, 79 Svobondyi Prospekt, Krasnoyarsk 660041, Krasnoyarsk Kra, Russia.
Russian Acad Sci, Siberian Branch, Inst Biophys, 50-50 Akademgorodok, Krasnoyarsk 660041, Krasnoyarsk Kra, Russia.

Доп.точки доступа:
Diaz, A. V.; Ageev, Aleksander Vladimirovich; Ivanova, Elena Anatolevna; Anishchenko, Olesia Valerevna; Russian Foundation for Basic ResearchRussian Foundation for Basic Research (RFBR) [20-04-00960]; Ministry of Science and Higher Education of the Russian Federation [5-100, FSRZ-2020-0014]

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Prolonged effects of nanodiamonds conjugated with corticosteroids / C. K. Rhee, A. E. Burov, A. P. Puzyr, V. S. Bondar // Appl. Surf. Sci. - 2021. - Vol. 551: 16th International Symposium on Novel and Nano Materials (ISNNM) (NOV 03-06, 2020, Jeju, SOUTH KOREA). - Ст. 149334, DOI 10.1016/j.apsusc.2021.149334. - Cited References:26. - The authors are grateful to Daewha Alloytech Co., Ltd (Republic of Korea) for financial support of the research. . - ISSN 0169-4332. - ISSN 1873-5584

РУБ Chemistry, Physical + Materials Science, Coatings & Films + Physics,
Рубрики:
BIOMEDICAL APPLICATIONS
SURFACE MODIFICATION
Кл.слова (ненормированные):
Detonation nanodiamonds -- Modification -- Corticosteroids -- Delivery system -- Prolonged release
Аннотация: The application of detonation nanodiamonds (DNDs) in delivery systems has been demonstrated many times for a variety of substances, including anti-inflammatory drugs, antibiotics, antineoplastic agents, vitamins etc. The applicability of detonation nanodiamonds as a carrier for delivery of corticosteroids is investigated in this study. Commercial DNDs were modified to obtain particles with high colloidal stability in aqueous suspensions. Physical adsorption was then used to conjugate the DNDs with methylprednisolone sodium succinate and dexamethasone sodium phosphate. The experimental adsorption isotherms were fit with Langmuir and Freundlich adsorption models. The results of in vitro release study demonstrated an explicit prolonged effect of DNDs, due to which a sustained release of the adsorbed drugs was provided.

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Держатели документа:
Korea Atom Energy Res Inst, Daejeon 34057, South Korea.
Fed Res Ctr Informat & Computat Technol, Krasnoyarsk 660049, Russia.
Krasnoyarsk Sci Ctr SB RAS, Inst Biophys SB RAS, Fed Res Ctr, Krasnoyarsk 660036, Russia.

Доп.точки доступа:
Rhee, Chang Kyu; Burov, Andrey E.; Puzyr, Alexey P.; Bondar, Vladimir S.; Daewha Alloytech Co., Ltd (Republic of Korea)

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Influence of NaCl on Productivity and Fluorescence Parameters of Nasturtium officinale R. Br. and Its Relevance to Artificial Closed Ecosystems / A. M. Pavlova, N. A. Gaevskii, O. V. Anishchenko [et al.] // Russ. J. Plant Physiol. - 2021. - Vol. 68, Is. 6. - P1173-1185, DOI 10.1134/S1021443721050137. - Cited References:27. - This work was supported by the fundamental research program of the Russian Academy of Sciences for 2013-2020, project no. 56.1.4 Sustainability of Higher Plant Cenoses Grown on Nutrient Media with Mineralized Organic Waste in Closed Human-Inhabited Ecological Systems. . - ISSN 1021-4437. - ISSN 1608-3407

РУБ Plant Sciences
Рубрики:
CHLOROPHYLL FLUORESCENCE
   SALT STRESS
   TOLERANCE
   PHOTOSYNTHESIS
Кл.слова (ненормированные):
Nasturtium officinale -- glycophyte -- salt tolerance -- photosynthetic -- apparatus -- closed ecosystems
Аннотация: Productivity values, sodium accumulation in aboveground biomass, and photosynthetic indices of watercress (Nasturtium officinale) leaves were investigated under conditions resembling artificial closed ecological systems (CES). The seedlings were grown on nutrient media with various NaCl concentrations (0.7, 1.4, and 1.8 g/L) for 7, 14, and 19 days after transferring them to saline solutions. The productivity of plants on the seventh day of their growth on saline media did not differ from that of control plants. The decrease in plant productivity was noted in all the treatments starting from the 14th day after transferring the plants to saline solutions. When NaCl concentration in the nutrient solution was raised from 0.7 to 1.8 g/L, a significant increase in relative Na+ content in plant tissues was observed, regardless of the duration of NaCl treatment. A substantial decrease in chlorophyll (a + b) to carotenoid content ratio was noted on the seventh and 14th days in plants grown at 1.8 g/L NaCl. In plants treated for 7 days with 0.7 and 1.4 g/L NaCl, the content of chlorophylls a and b and carotenoids was found to increase, which indicates the tolerance of N. officinale to CES conditions. The relative content of chlorophylls a and b in the light-harvesting chlorophyll (a + b) complex was independent of the extent of salinity. The maximum quantum yield of photosystem II reaction in N. officinale plants had typically high values (Y(II)(max) of 0.755 +/- 0.007). Using the Imaging Maxi version of the pulse amplitude-modulated (PAM) fluorometer, it was found that light curves for the effective quantum yield of photochemical and nonphotochemical fluorescence quenching (Y(II) and Y(NPQ), respectively) differed appreciably between the salt-treated and untreated plants in the case of long-term cultivation (19 days) at 0.7 and 1.4 g/L NaCl. The treatment with 1.8 g/L NaCl for the period from 14 to 19 days had no effect on light curves of Y(II) and Y(NPQ). It is argued that N. officinale can be used as a source of NaCl for humans under CES conditions.

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Держатели документа:
Siberian Fed Univ, Krasnoyarsk, Russia.
Russian Acad Sci, Inst Biophys, Siberian Branch, Krasnoyarsk, Russia.
Reshetnev Siberian State Univ Sci & Technol, Krasnoyarsk, Russia.

Доп.точки доступа:
Pavlova, A. M.; Gaevskii, N. A.; Anishchenko, O. V.; Tikhomirova, N. A.; Tikhomirov, A. A.; fundamental research program of the Russian Academy of SciencesRussian Academy of Sciences [56.1.4]

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Development of Cellular and Enzymatic Bioluminescent Assay Systems to Study Low-Dose Effects of Thorium / O. V. Kolesnik, T. V. Rozhko, M. A. Lapina [et al.] // Bioengineering-Basel. - 2021. - Vol. 8, Is. 12. - Ст. 194, DOI 10.3390/bioengineering8120194. - Cited References:77 . - ISSN 2306-5354

РУБ Biotechnology & Applied Microbiology + Engineering, Biomedical

Кл.слова (ненормированные):
bioassay -- bioluminescence -- luminous bacteria -- enzymes -- reactive oxygen -- species -- thorium -- low-dose exposure -- radiation hormesis
Аннотация: Thorium is one of the most widespread radioactive elements in natural ecosystems, along with uranium, it is the most important source of nuclear energy. However, the effects of thorium on living organisms have not been thoroughly studied. Marine luminescent bacteria and their enzymes are optimal bioassays for studying low-dose thorium exposures. Luminescent bioassays provide a quantitative measure of toxicity and are characterized by high rates, sensitivity, and simplicity. It is known that the metabolic activity of bacteria is associated with the production of reactive oxygen species (ROS). We studied the effects of thorium-232 (10(-11)-10(-3) M) on Photobacterium phosphoreum and bacterial enzymatic reactions; kinetics of bacterial bioluminescence and ROS content were investigated in both systems. Bioluminescence activation was revealed under low-dose exposures (<0.1 Gy) and discussed in terms of "radiation hormesis". The activation was accompanied by an intensification of the oxidation of a low-molecular reducer, NADH, during the enzymatic processes. Negative correlations were found between the intensity of bioluminescence and the content of ROS in bacteria and enzyme systems; an active role of ROS in the low-dose activation by thorium was discussed. The results contribute to radioecological potential of bioluminescence techniques adapted to study low-intensity radioactive exposures.

WOS
Держатели документа:
RAS, Krasnoyarsk Sci Ctr SB, Inst Biophys SB, Fed Res Ctr, Krasnoyarsk 660036, Russia.
Siberian Fed Univ, Biophys Dept, Krasnoyarsk 660041, Russia.
Krasnoyarsk State Med Acad, Krasnoyarsk 660022, Russia.
Natl Res Tomsk Polytech Univ, Tomsk 634050, Russia.

Доп.точки доступа:
Kolesnik, Olga V.; Rozhko, Tatiana V.; Lapina, Maria A.; Solovyev, Vladislav S.; Sachkova, Anna S.; Kudryasheva, Nadezhda S.; Kolesnik, Olga

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A study of the properties and efficacy of microparticles based on P(3HB) and P(3HB/3HV) loaded with herbicides / R. Vijayamma, H. J. Maria, S. Thomas [et al.] // J. Appl. Polym. Sci. - 2021, DOI 10.1002/app.51756 . - Article in press. - ISSN 0021-8995
Кл.слова (ненормированные):
biodegradable -- drug delivery systems -- microparticles -- Agricultural robots -- Controlled drug delivery -- Solubility -- Targeted drug delivery -- Weed control -- 3-Hydroxybutyrate -- Average diameter -- Biodegradable -- Drug-delivery systems -- Human impact -- Metribuzin -- Micro particles -- Poly-3-hydroxybutyrate -- Polyhydroxyalkanoates -- Property -- Herbicides
Аннотация: The wide use of pesticides in agriculture has caused uncontrolled distribution of these chemicals in the environment, calling for the development and investigation of new environmentally friendly formulations, which would reduce human impact on nature. In the present study, the metribuzin (MET), tribenuron-methyl (TBM), and fenoxaprop-P-ethyl (FPE) herbicides were encapsulated in microparticles of degradable microbial polymers – polyhydroxyalkanoates (PHAs) – of two types – poly-3-hydroxybutyrate [P(3HB)] and poly(3-hydroxybutyrate-co-3-hydroxyvalerate [P(3HB/3HV)]. The use of P(3HB) resulted in higher yields of microparticles (63% to 79%) and larger sizes of the particles, whose average diameter was 0.60 ± 0.06–0.75 ± 0.11 ?m, while the average diameter of copolymer particles varied between 0.43 ± 0.12 and 0.55 ± 0.05 ?m. Encapsulation efficiency was rather determined by the type of herbicide and its solubility, varying from 24.7% to 48.2%. In vitro herbicide release from microparticles to water was affected by herbicide solubility and PHA chemical composition. The readily soluble MET showed the highest release rate, and over 30 days, 64% and 78% of the encapsulated amounts were released from P(3HB) and P(3HB/3HV) microparticles, respectively. High herbicidal activity of microparticles loaded with metribuzin and tribenuron-methyl was demonstrated in the laboratory stands of the Elsholtzia ciliata weed plant. © 2021 Wiley Periodicals LLC.

Scopus
Держатели документа:
Institute of Fundamental Biology and Biotechnology, Siberian Federal University, Krasnoyarsk, Russian Federation
International and Inter University Centre for Nanoscience and Nanotechnology, Mahatma Gandhi University, Kottayam, India
Institute of Biophysics SB RAS, Federal Research Center “Krasnoyarsk Science Center SB RAS”, Krasnoyarsk, Russian Federation
Krasnoyarsk Regional Center of Research Equipment of Federal Research Center “Krasnoyarsk Science Center SB RAS”, Krasnoyarsk, Russian Federation
L.V. Kirensky Institute of Physics, Federal Research Center “Krasnoyarsk Science Center SB RAS”, Krasnoyarsk, Russian Federation
Scientific Laboratory, Reshetnev Siberian State University of Science and Technology, Krasnoyarsk, Russian Federation

Доп.точки доступа:
Vijayamma, R.; Maria, H. J.; Thomas, S.; Shishatskaya, E. I.; Kiselev, E. G.; Nemtsev, I. V.; Sukhanova, A. A.; Volova, T. G.

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10.

A study of the properties and efficacy of microparticles based on P(3HB) and P(3HB/3HV) loaded with herbicides / R. Vijayamma, H. J. Maria, S. Thomas [et al.] // J. Appl. Polym. Sci. - 2021. - Ст. e51756, DOI 10.1002/app.51756. - Cited References:57. - This work was supported by Project "Agropreparations of the new generation: a strategy of construction and realization" (Agreement No 074-02-2018-328) in accordance with Resolution No 220 of the Government of the Russian Federation of April 9, 2010, "On measures designed to attract leading scientists to the Russian institutions of higher learning". Instruments of Krasnoyarsk Regional Center of Research Equipment of Federal Research Center Krasnoyarsk Science Center SB RAS were used. . - Article in press. - ISSN 0021-8995. - ISSN 1097-4628

РУБ Polymer Science
Рубрики:
FENOXAPROP-P-ETHYL
CONTROLLED-RELEASE
BIODEGRADABLE
Кл.слова (ненормированные):
biodegradable -- drug delivery systems -- microparticles
Аннотация: The wide use of pesticides in agriculture has caused uncontrolled distribution of these chemicals in the environment, calling for the development and investigation of new environmentally friendly formulations, which would reduce human impact on nature. In the present study, the metribuzin (MET), tribenuron-methyl (TBM), and fenoxaprop-P-ethyl (FPE) herbicides were encapsulated in microparticles of degradable microbial polymers - polyhydroxyalkanoates (PHAs) - of two types - poly-3-hydroxybutyrate [P(3HB)] and poly(3-hydroxybutyrate-co-3-hydroxyvalerate [P(3HB/3HV)]. The use of P(3HB) resulted in higher yields of microparticles (63% to 79%) and larger sizes of the particles, whose average diameter was 0.60 +/- 0.06-0.75 +/- 0.11 mu m, while the average diameter of copolymer particles varied between 0.43 +/- 0.12 and 0.55 +/- 0.05 mu m. Encapsulation efficiency was rather determined by the type of herbicide and its solubility, varying from 24.7% to 48.2%. In vitro herbicide release from microparticles to water was affected by herbicide solubility and PHA chemical composition. The readily soluble MET showed the highest release rate, and over 30 days, 64% and 78% of the encapsulated amounts were released from P(3HB) and P(3HB/3HV) microparticles, respectively. High herbicidal activity of microparticles loaded with metribuzin and tribenuron-methyl was demonstrated in the laboratory stands of the Elsholtzia ciliata weed plant.

WOS
Держатели документа:
Siberian Fed Univ, Inst Fundamental Biol & Biotechnol, Krasnoyarsk, Russia.
Mahatma Gandhi Univ, Int & Inter Univ Ctr Nanosci & Nanotechnol, Kottayam, Kerala, India.
RAS, Krasnoyarsk Sci Ctr SB, Fed Res Ctr, Inst Biophys SB, Krasnoyarsk, Russia.
RAS, Krasnoyarsk Sci Ctr SB, Res Equipment Fed Res Ctr, Krasnoyarsk Reg Ctr, Krasnoyarsk, Russia.
RAS, Krasnoyarsk Sci Ctr SB, Fed Res Ctr, LV Kirensky Inst Phys, Krasnoyarsk, Russia.
Reshetnev Siberian State Univ Sci & Technol, Sci Lab, Krasnoyarsk, Russia.

Доп.точки доступа:
Vijayamma, Raji; Maria, Hanna J.; Thomas, Sabu; Shishatskaya, Ekaterina I.; Kiselev, Evgeniy G.; Nemtsev, Ivan V.; Sukhanova, Anna A.; Volova, Tatiana G.; Project "Agropreparations of the new generation: a strategy of construction and realization" [074-02-2018-328]; Government of the Russian Federation [220]

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11.

Zooplankton carcasses stimulate microbial turnover of allochthonous particulate organic matter / D. Neubauer, O. Kolmakova, J. Woodhouse [et al.] // ISME J. - 2021, DOI 10.1038/s41396-020-00883-w. - Cited References:83. - Open Access funding enabled and organized by Projekt DEAL. . - Article in press. - ISSN 1751-7362. - ISSN 1751-7370

РУБ Ecology + Microbiology
Рубрики:
FRESH-WATER
   SEASONAL-CHANGES
   CARBON
   LAKE
   DECOMPOSITION
   DEGRADATION
Аннотация: Carbon turnover in aquatic environments is dependent on biochemical properties of organic matter (OM) and its degradability by the surrounding microbial community. Non-additive interactive effects represent a mechanism where the degradation of biochemically persistent OM is stimulated by the provision of bioavailable OM to the degrading microbial community. Whilst this is well established in terrestrial systems, whether it occurs in aquatic ecosystems remains subject to debate. We hypothesised that OM from zooplankton carcasses can stimulate the degradation of biochemically persistent leaf material, and that this effect is influenced by the daphnia:leaf OM ratio and the complexity of the degrading microbial community. Fresh Daphnia magna carcasses and C-13-labelled maize leaves (Zea mays) were incubated at different ratios (1:1, 1:3 and 1:5) alongside either a complex microbial community (50 mu m) or solely bacteria (0.8 mu m). C-13 stable-isotope measurements of CO2 analyses were combined with phospholipid fatty acids (PLFA) analysis and DNA sequencing to link metabolic activities, biomass and taxonomic composition of the microbial community. Our experiments indicated a significantly higher respiration of leaf-derived C when daphnia-derived OM was most abundant (i.e. daphnia:leaf OM ratio of 1:1). This process was stronger in a complex microbial community, including eukaryotic microorganisms, than a solely bacterial community. We concluded that non-additive interactive effects were a function of increased C-N chemodiversity and microbial complexity, with the highest net respiration to be expected when chemodiversity is high and the degrading community complex. This study indicates that identifying the interactions and processes of OM degradation is one important key for a deeper understanding of aquatic and thus global carbon cycle.

WOS
Держатели документа:
Leibniz Inst Freshwater Ecol & Inland Fisheries I, Dept Expt Limnol, D-16775 Stechlin, Germany.
Potsdam Univ, Inst Biochem & Biol, D-14476 Potsdam, Germany.
RAS, Inst Biophys SB, Fed Res Ctr, Krasnoyarsk Sci Ctr, Krasnoyarsk, Russia.
Siberian Fed Univ, Inst Fundamental Biol & Biotechnol, Krasnoyarsk, Russia.
Helmholtz Ctr Potsdam, Sect Organ Geochem 32, GFZ German Res Ctr Geosci, D-14473 Potsdam, Germany.
Leibniz Inst Freshwater Ecol & Inland Fisheries I, Dept Chem Analyt & Biogeochem, Muggelseedamm 310, D-12587 Berlin, Germany.

Доп.точки доступа:
Neubauer, Darshan; Kolmakova, Olesya; Woodhouse, Jason; Taube, Robert; Mangelsdorf, Kai; Gladyshev, Michail; Premke, Katrin; Grossart, Hans-Peter; Projekt DEAL

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12.

Software for matching standard activity enzyme biosensors for soil pollution analysis / V. A. Kratasyuk, E. M. Kolosova, O. S. Sutormin [et al.] // Sensors. - 2021. - Vol. 21, Is. 3. - Ст. 1017. - P1-10, DOI 10.3390/s21031017 . - ISSN 1424-8220
Кл.слова (ненормированные):
Bacterial luciferase -- Biosensors -- Butyrylcholinesterase -- Enzyme -- Lactic dehydrogenase -- Software -- Soil pollution -- Biosensors -- Soil pollution -- Soil surveys -- Soils -- Commercial standards -- Environmental Monitoring -- Enzyme biosensors -- Enzyme systems -- Inhibitory effect -- JavaScript programming -- Soil sample -- Toxic agents -- Enzyme activity
Аннотация: This work is dedicated to developing enzyme biosensor software to solve problems regarding soil pollution analysis. An algorithm and specialised software have been developed which stores, analyses and visualises data using JavaScript programming language. The developed software is based on matching data of 51 non-commercial standard soil samples and their inhibitory effects on three enzyme systems of varying complexity. This approach is able to identify the influence of chemical properties soil samples, without toxic agents, on enzyme biosensors. Such software may find wide use in environmental monitoring. © 2021 by the authors. Licensee MDPI, Basel, Switzerland.

Scopus
Держатели документа:
Department of Biophysics, Institute of Fundamental Biology and Biotechology, Siberian Federal University, 79 Svobodny pr, Krasnoyarsk, 660041, Russian Federation
Federal Research Center ‘Krasnoyarsk Science Center SB RAS’, Photobiology Laboratory, Institute of Biophysics, Russian Academy of Sciences, Siberian Branch, 50/50 Akagemgorodok, Krasnoyarsk, 660036, Russian Federation
Department of High-Efficiency Calculations, Siberian Federal University, 26-ULK building Kirensky St, Krasnoyarsk, 660074, Russian Federation
Federal Research Center ‘Krasnoyarsk Science Center SB RAS’, Krasnoyarsk Research Institute of Agriculture, Russian Academy of Sciences, Siberian Branch, 66 Svobodny pr, Krasnoyarsk, 660037, Russian Federation
Federal Research Center ‘Krasnoyarsk Scientific Center SB RAS’, Krasnoyarsk Research Institute of Agricultural, Siberian Federal University, 79 Svobodny pr, Krasnoyarsk, 660041, Russian Federation

Доп.точки доступа:
Kratasyuk, V. A.; Kolosova, E. M.; Sutormin, O. S.; Lonshakova-Mukina, V. I.; Baygin, M. M.; Rimatskaya, N. V.; Sukovataya, I. E.; Shpedt, A. A.

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13.

Threshold concentrations of the road salt for adverse effects on females and resting eggs of cladoceran Moina macrocopa / T. Lopatina, O. Anishchenko, N. Oskina, E. Zadereev // Aquatic Ecol. - 2021, DOI 10.1007/s10452-021-09830-z . - Article in press. - ISSN 1386-2588
Кл.слова (ненормированные):
Aquatic ecosystems -- Cladocera -- Resting eggs -- Road salt -- Salinity
Аннотация: The salinization of freshwaters due to the use of deicing road salts is a serious anthropogenic threat. We investigated the effects of the road deicer, which is mostly composed (ca. 70%) of NaCl, on the life cycle parameters of the cladoceran Moina macrocopa in acute and chronic toxicity tests and on the hatching success of resting eggs exposed to sediments contaminated with the road salt. The negative effects of the road salt on survival and life cycle parameters of animals were observed at concentrations above 5 g L?1. The 6-month exposure of resting eggs to contaminated sediments had a consistent but relatively weak effect on the postexposure hatching of resting eggs. Experiments demonstrated that the concentration of the deicer in the top water layer in the water-sediment systems is more important for the hatching success of resting eggs than the salt content in the sediment. Only 2.2 ± 1.9% of resting eggs hatched when the deicer content in the top water layer was equal to 12 g L?1. Lethal effects on hatchlings were observed starting from the deicer content in the water equal to 1 g L?1, and 97.0 ± 0.8% of hatchlings were dead at the deicer content in the water equal to 5 g L?1. Thus, the resilience of resting eggs to the contaminated sediments can ensure the replenishment of the population from the egg bank after the salinity disturbance is diminished but the negative effects of the elevated salt content in surface waters on active population will be manifested at lower salinities. © 2021, The Author(s), under exclusive licence to Springer Nature B.V. part of Springer Nature.

Scopus
Держатели документа:
Institute of Biophysics, Federal Research Centre, Krasnoyarsk Scientific Centre, Siberian Branch, Russian Academy of Sciences, 50/50 Akademgorodok, Krasnoyarsk, 660036, Russian Federation
Siberian Federal University, 79 Svobodniy Ave, Krasnoyarsk, 660041, Russian Federation

Доп.точки доступа:
Lopatina, T.; Anishchenko, O.; Oskina, N.; Zadereev, E.

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14.

Polysaccharide-coated iron oxide nanoparticles: Synthesis, properties, surface modification / S. V. Stolyar, V. V. Krasitskaya, L. A. Frank [et al.] // Mater Lett. - 2021. - Vol. 284. - Ст. 128920, DOI 10.1016/j.matlet.2020.128920 . - ISSN 0167-577X
Кл.слова (ненормированные):
Biomaterials -- Magnetic materials -- Nanoparticles -- Polysaccharide -- Iron oxides -- Magnetite -- Magnetite nanoparticles -- Molecules -- Polysaccharides -- Synthesis (chemical) -- Arabinogalactan -- Bioanalytical systems -- Covalent immobilization -- Iron oxide nanoparticle -- Magnetic nanoparticles
Аннотация: In this work, magnetite nanoparticles coated with polysaccharides were synthesized. Arabinogalactan and chitosan were used as polysaccharides. The possibilities of immobilization of biospecific molecules on the surface of the obtained composites were studied. Experiments on covalent immobilization of biospecific molecules on magnetic nanoparticles coated with a polysaccharide showed a high density of immobilized molecules. This suggests the use of such materials in bioanalytical systems or as affinity sorbents. © 2020 Elsevier B.V.

Scopus
Держатели документа:
Krasnoyarsk Scientific Center, Federal Research Center KSC SB RAS, Krasnoyarsk, Russian Federation
Kirensky Institute of Physics, Federal Research Center KSC SB RAS, Krasnoyarsk, Russian Federation
Siberian Federal University, Krasnoyarsk, Russian Federation
Institute of Biophysics, Federal Research Center KSC SB RAS, Krasnoyarsk, Russian Federation
Astrakhan State University, Astrakhan, Russian Federation
University of Al-qasim Green, College of Biotechnology, Iraq

Доп.точки доступа:
Stolyar, S. V.; Krasitskaya, V. V.; Frank, L. A.; Yaroslavtsev, R. N.; Chekanova, L. A.; Gerasimova, Y. V.; Volochaev, M. N.; Bairmani, M. S.; Velikanov, D. A.

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15.

Polysaccharide-coated iron oxide nanoparticles: Synthesis, properties, surface modification / S. V. Stolyar, V. V. Krasitskaya, L. A. Frank [et al.] // Mater. Lett. - 2021. - Vol. 284. - Ст. 128920, DOI 10.1016/j.matlet.2020.128920. - Cited References:12. - The reported study was carried out with the financial support of the Russian Foundation for Fundamental Research, the Government of the Krasnoyarsk Territory, the Krasnoyarsk Territory Fund for Support of Scientific and Technical Activity in the framework of scientific Project No. 18-43-243003. This work was supported by the Council of the President of the Russian Federation for State Support of Young Scientists and Leading Scientific Schools (project no. MK-1263.2020.3). . - ISSN 0167-577X. - ISSN 1873-4979

РУБ Materials Science, Multidisciplinary + Physics, Applied

Кл.слова (ненормированные):
Nanoparticles -- Biomaterials -- Magnetic materials -- Polysaccharide
Аннотация: In this work, magnetite nanoparticles coated with polysaccharides were synthesized. Arabinogalactan and chitosan were used as polysaccharides. The possibilities of immobilization of biospecific molecules on the surface of the obtained composites were studied. Experiments on covalent immobilization of biospecific molecules on magnetic nanoparticles coated with a polysaccharide showed a high density of immobilized molecules. This suggests the use of such materials in bioanalytical systems or as affinity sorbents. (c) 2020 Elsevier B.V. All rights reserved.

WOS
Держатели документа:
RAS, Krasnoyarsk Sci Ctr, Fed Res Ctr, KSC,SB, Krasnoyarsk, Russia.
RAS, Kirensky Inst Phys, Fed Res Ctr, KSC,SB, Krasnoyarsk, Russia.
Siberian Fed Univ, Krasnoyarsk, Russia.
RAS, Inst Biophys, Fed Res Ctr, KSC,SB, Krasnoyarsk, Russia.
Astrakhan State Univ, Astrakhan, Russia.
Univ Al Qasim Green, Coll Biotechnol, Al Qasim, Iraq.

Доп.точки доступа:
Stolyar, S. V.; Krasitskaya, V. V.; Frank, L. A.; Yaroslavtsev, R. N.; Chekanova, L. A.; Gerasimova, Y. V.; Volochaev, M. N.; Bairmani, M. Sh.; Velikanov, D. A.; Russian Foundation for Fundamental ResearchRussian Foundation for Basic Research (RFBR); Government of the Krasnoyarsk Territory; Krasnoyarsk Territory Fund [18-43-243003]; Council of the President of the Russian Federation for State Support of Young Scientists and Leading Scientific SchoolsLeading Scientific Schools Program [MK-1263.2020.3]

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16.

Prolonged effects of nanodiamonds conjugated with corticosteroids / C. Kyu Rhee, A. E. Burov, A. P. Puzyr, V. S. Bondar // Appl Surf Sci. - 2021. - Vol. 551. - Ст. 149334, DOI 10.1016/j.apsusc.2021.149334 . - ISSN 0169-4332
Кл.слова (ненормированные):
Corticosteroids -- Delivery system -- Detonation nanodiamonds -- Modification -- Prolonged release -- Adsorption -- Controlled drug delivery -- Detonation -- Drug products -- Sodium compounds -- Suspensions (fluids) -- Targeted drug delivery -- Anti-inflammatory drugs -- Antineoplastic agents -- Aqueous suspensions -- Carrier for deliveries -- Detonation nanodiamonds -- Dexamethasone sodium phosphate -- Langmuir and freundlich adsorption -- Physical adsorption -- Nanodiamonds
Аннотация: The application of detonation nanodiamonds (DNDs) in delivery systems has been demonstrated many times for a variety of substances, including anti-inflammatory drugs, antibiotics, antineoplastic agents, vitamins etc. The applicability of detonation nanodiamonds as a carrier for delivery of corticosteroids is investigated in this study. Commercial DNDs were modified to obtain particles with high colloidal stability in aqueous suspensions. Physical adsorption was then used to conjugate the DNDs with methylprednisolone sodium succinate and dexamethasone sodium phosphate. The experimental adsorption isotherms were fit with Langmuir and Freundlich adsorption models. The results of in vitro release study demonstrated an explicit prolonged effect of DNDs, due to which a sustained release of the adsorbed drugs was provided. © 2021 Elsevier B.V.

Scopus
Держатели документа:
Korea Atomic Energy Research Institute, Daejeon, 34057, South Korea
Federal Research Center for Information and Computational Technologies, Krasnoyarsk, 660049, Russian Federation
Institute of Biophysics SB RAS, Federal Research Center “Krasnoyarsk Science Center SB RAS”, Krasnoyarsk, 660036, Russian Federation

Доп.точки доступа:
Kyu Rhee, C.; Burov, A. E.; Puzyr, A. P.; Bondar, V. S.

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17.

The Recombinant Luciferase of the Fungus Neonothopanus nambi: Obtaining and Properties / A. Y. Gorokhovatsky, T. V. Chepurnykh, A. S. Shcheglov [et al.] // Doklad. Biochem. Biophys. - 2021. - Vol. 496, Is. 1. - P52-55, DOI 10.1134/S1607672921010051 . - ISSN 1607-6729
Кл.слова (ненормированные):
bioluminescence -- heterologous expression -- luciferase -- Neonothopanus nambi -- nnLuz -- Pichia pastoris
Аннотация: Abstract: A key component of the recently described bioluminescent system of higher fungi is luciferase, a new class of proteins. The properties of fungal luciferase and their relationship with its structure are interesting both for improving autoluminescent systems already created on its basis and for creating new ones. Therefore, it is extremely important to understand the spatial structure of this protein. We have performed heterologous expression and purification of Neonothopanus nambi luciferase, obtained a protein suitable for subsequent crystallization, and also determined some biochemical properties of the recombinant luciferase. © 2021, The Author(s),.

Scopus
Держатели документа:
Shemyakin–Ovchinnikov Institute of Bioorganic Chemistry, Russian Academy of Sciences, Moscow, Russian Federation
Institute of Biophysics, Federal Research Center “Krasnoyarsk Scientific Center of the Siberian Branch of the Russian Academy of Sciences”, Krasnoyarsk, Russian Federation

Доп.точки доступа:
Gorokhovatsky, A. Y.; Chepurnykh, T. V.; Shcheglov, A. S.; Mokrushina, Y. A.; Baranova, M. N.; Goncharuk, S. A.; Purtov, K. V.; Petushkov, V. N.; Rodionova, N. S.; Yampolsky, I. V.

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18.

Winter atmospheric nutrient and pollutant deposition on Western Sayan Mountain lakes (Siberia) / D. Diaz-De-Quijano, A. Vladimirovich Ageev, E. Anatolevna Ivanova, O. Valerevna Anishchenko // Biogeosciences. - 2021. - Vol. 18, Is. 5. - P1601-1618, DOI 10.5194/bg-18-1601-2021 . - ISSN 1726-4170
Аннотация: The world map of anthropogenic atmospheric nitrogen deposition and its effects on natural ecosystems is not described with equal precision everywhere. In this paper, we report atmospheric nutrient, sulfate and spheroidal carbonaceous particle (SCP) deposition rates, based on snowpack analyses of a formerly unexplored Siberian mountain region. Then, we discuss their potential effects on lake phytoplankton biomass limitation. We estimate that the nutrient depositions observed in the late-season snowpack (4016 mgNO3-Nm2 and 0.580.13 mg TP-Pm2; TP for total phosphorous) would correspond to yearly depositions lower than 11971 mgNO3-Nm2 yr1 and higher than 1.710.91 mg TP-Pm2 yr1. These yearly deposition estimates would approximately fit the predictions of global deposition models and correspond to the very low nutrient deposition range, although they are still higher than world background values. In spite of the fact that such a low atmospheric nitrogen deposition rate would be enough to induce nitrogen limitation in unproductive mountain lakes, phosphorus deposition was also extremely low, and the resulting lake water N: P ratio was unaffected by atmospheric nutrient deposition. In the end, the studied lakes' phytoplankton appeared to be split between phosphorus and nitrogen limitation. We conclude that these pristine lakes are fragile sensitive systems exposed to the predicted climate warming, increased winter precipitation, enhanced forest fires and shifts in anthropogenic nitrogen emissions that could finally couple their water chemistry to that of atmospheric nutrient deposition and unlock temperature-inhibited responses of phytoplankton to nutrient shifts. © Author(s) 2021. This work is distributed under the Creative Commons Attribution 4.0 License.

Scopus
Держатели документа:
Siberian Federal University, 79, Svobondyi prospekt, Krasnoyarsk, Krasnoyarsk Krai, 660041, Russian Federation
Institute of Biophysics, Siberian Branch Russian Academy of Sciences, 50/50, Akademgorodok, Krasnoyarsk, Krasnoyarsk Krai, 660036, Russian Federation

Доп.точки доступа:
Diaz-De-Quijano, D.; Vladimirovich Ageev, A.; Anatolevna Ivanova, E.; Valerevna Anishchenko, O.

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19.

Threshold concentrations of the road salt for adverse effects on females and resting eggs of cladoceran Moina macrocopa / T. Lopatina, O. Anishchenko, N. Oskina, E. Zadereev // Aquat. Ecol. - 2021, DOI 10.1007/s10452-021-09830-z. - Cited References:45. - The reported study was funded by the Russian Foundation for Basic Research, the Krasnoyarsk Krai Government, and the Krasnoyarsk Regional Fund for supporting scientific and technical activities, project number 19-44-240014. We are grateful to two anonymous reviewers for the valuable comments and suggestions and to Elena Krasova for linguistic check and improvements. . - Article in press. - ISSN 1386-2588. - ISSN 1573-5125

РУБ Ecology + Limnology + Marine & Freshwater Biology

Кл.слова (ненормированные):
Cladocera -- Resting eggs -- Road salt -- Salinity -- Aquatic ecosystems
Аннотация: The salinization of freshwaters due to the use of deicing road salts is a serious anthropogenic threat. We investigated the effects of the road deicer, which is mostly composed (ca. 70%) of NaCl, on the life cycle parameters of the cladoceran Moina macrocopa in acute and chronic toxicity tests and on the hatching success of resting eggs exposed to sediments contaminated with the road salt. The negative effects of the road salt on survival and life cycle parameters of animals were observed at concentrations above 5 g L-1. The 6-month exposure of resting eggs to contaminated sediments had a consistent but relatively weak effect on the postexposure hatching of resting eggs. Experiments demonstrated that the concentration of the deicer in the top water layer in the water-sediment systems is more important for the hatching success of resting eggs than the salt content in the sediment. Only 2.2 +/- 1.9% of resting eggs hatched when the deicer content in the top water layer was equal to 12 g L-1. Lethal effects on hatchlings were observed starting from the deicer content in the water equal to 1 g L-1, and 97.0 +/- 0.8% of hatchlings were dead at the deicer content in the water equal to 5 g L-1. Thus, the resilience of resting eggs to the contaminated sediments can ensure the replenishment of the population from the egg bank after the salinity disturbance is diminished but the negative effects of the elevated salt content in surface waters on active population will be manifested at lower salinities.

WOS
Держатели документа:
Russian Acad Sci, Fed Res Ctr, Krasnoyarsk Sci Ctr, Inst Biophys,Siberian Branch, 50-50 Akademgorodok, Krasnoyarsk 660036, Russia.
Siberian Fed Univ, 79 Svobodniy Ave, Krasnoyarsk 660041, Russia.

Доп.точки доступа:
Lopatina, Tatiana; Anishchenko, Olesya; Oskina, Natalia; Zadereev, Egor; Russian Foundation for Basic ResearchRussian Foundation for Basic Research (RFBR); Krasnoyarsk Krai Government; Krasnoyarsk Regional Fund [19-44-240014]

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20.

Software for Matching Standard Activity Enzyme Biosensors for Soil Pollution Analysis / V. A. Kratasyuk, E. M. Kolosova, O. S. Sutormin [et al.] // Sensors. - 2021. - Vol. 21, Is. 3. - Ст. 1017, DOI 10.3390/s21031017. - Cited References:20. - This research was funded by RFBR, Krasnoyarsk Territory and Krasnoyarsk Regional Fund of Science, Grant number 20-44-243001 and the Ministry of Science and Higher Education of the Russian Federation, Grant number FSRZ-2020-0006. . - ISSN 1424-8220

РУБ Chemistry, Analytical + Engineering, Electrical & Electronic + Instruments

Кл.слова (ненормированные):
biosensors -- enzyme -- butyrylcholinesterase -- lactic dehydrogenase -- bacterial luciferase -- soil pollution -- software
Аннотация: This work is dedicated to developing enzyme biosensor software to solve problems regarding soil pollution analysis. An algorithm and specialised software have been developed which stores, analyses and visualises data using JavaScript programming language. The developed software is based on matching data of 51 non-commercial standard soil samples and their inhibitory effects on three enzyme systems of varying complexity. This approach is able to identify the influence of chemical properties soil samples, without toxic agents, on enzyme biosensors. Such software may find wide use in environmental monitoring.

WOS
Держатели документа:
Siberian Fed Univ, Inst Fundamental Biol & Biotechol, Dept Biophys, 79 Svobodny Pr, Krasnoyarsk 660041, Russia.
Russian Acad Sci, Krasnoyarsk Sci Ctr SB RAS, Photobiol Lab, Fed Res Ctr,Siberian Branch,Inst Biophys, 50-50 Akagemgorodok, Krasnoyarsk 660036, Russia.
Siberian Fed Univ, Dept High Efficiency Calculat, 26 ULK Bldg Kirensky St, Krasnoyarsk 660074, Russia.
Russian Acad Sci, Krasnoyarsk Sci Ctr SB RAS, Krasnoyarsk Res Inst Agr, Siberian Branch,Fed Res Ctr, 66 Svobodny Pr, Krasnoyarsk 660037, Russia.
Siberian Fed Univ, Inst Fundamental Biol & Biotechol, Dept Aquat & Terr Ecosyst, 79 Svobodny Pr, Krasnoyarsk 660041, Russia.

Доп.точки доступа:
Kratasyuk, Valentina A.; Kolosova, Elizaveta M.; Sutormin, Oleg S.; Lonshakova-Mukina, Viktoriya, I; Baygin, Matvey M.; Rimatskaya, Nadezhda, V; Sukovataya, Irina E.; Shpedt, Alexander A.; RFBRRussian Foundation for Basic Research (RFBR); Krasnoyarsk Territory and Krasnoyarsk Regional Fund of Science [20-44-243001]; Ministry of Science and Higher Education of the Russian Federation [FSRZ-2020-0006]

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