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Biodegradation of polyhydroxyalkanoates (PHAs) in tropical coastal waters and identification of PHA-degrading bacteria / T. G. Volova [et al.] // Polymer Degradation and Stability. - 2010. - Vol. 95, Is. 12. - P2350-2359, DOI 10.1016/j.polymdegradstab.2010.08.023 . - ISSN 0141-3910
Кл.слова (ненормированные):
Biopolymers in marine environment -- Degradation of polymers -- PHA properties -- PHA-degrading microorganisms -- Polyhydroxyalkanoates, PHA -- 16S rRNA -- 3-hydroxybutyric acid -- Amorphous phase -- Bacillus sp -- Biodegradation rate -- Chemical compositions -- Coastal waters -- Degradation rate -- Degrading bacteria -- Degree of crystallinity -- Enterobacter -- Hydroxyvalerate -- Marine environment -- PHA properties -- PHA-degrading microorganisms -- Polydispersity indices -- Polyhydroxyalkanoates -- Polymer chains -- Preparation technique -- Sole carbon source -- South China Sea -- Viet Nam -- Acids -- Bacteriology -- Biodegradable polymers -- Biodegradation -- Biomolecules -- Biopolymers -- Microorganisms -- Organic polymers -- Polydispersity -- Polymer films -- Polymers -- RNA -- Seawater -- Degradation
Аннотация: Biodegradability patterns of two PHAs: a polymer of 3-hydroxybutyric acid (3-PHB) and a copolymer of 3-hydroxybutyric and 3-hydroxyvaleric acids (3-PHB/3-PHV) containing 11 mol% of hydroxyvalerate, were studied in the tropical marine environment, in the South China Sea (Nha Trang, Vietnam). No significant differences have been observed between degradation rates of 3-PHB and 3-PHB/3-PHV specimens; it has been found that under study conditions, biodegradation is rather influenced by the shape of the polymer item and the preparation technique than by the chemical composition of the polymer. Biodegradation rates of polymer films in seawater have been found to be higher than those of compacted pellets. As 3-PHB and 3-PHB/3-PHV are degraded and the specimens lose their mass, molecular weight of both polymers is decreased, i.e. polymer chains get destroyed. The polydispersity index of the PHAs grows significantly. However, the degree of crystallinity of both PHAs remains unchanged, i.e. the amorphous phase and the crystalline one are equally disintegrated. PHA-degrading microorganisms were isolated using the clear-zone technique, by inoculating the isolates onto mineral agar that contained PHA as sole carbon source. Based on the 16S rRNA analysis, the PHA-degrading strains were identified as Enterobacter sp. (four strains), Bacillus sp. and Gracilibacillus sp.В© 2010 Elsevier Ltd. All rights reserved.

Scopus
Держатели документа:
Institute of Biophysics, Siberian Branch, Russian Academy of Sciences, Akademgorodok, Krasnoyarsk 660036, Russian Federation
Siberian Federal University, 79 Svobodny av., Krasnoyarsk 660041, Russian Federation
L.V. Kirensky Institute of Physics, Siberian Branch, Russian Academy of Sciences, Akademgorodok, Krasnoyarsk 660036, Russian Federation
A.N. Severtsov Institute of Ecology and Evolution RAS, 33 Leninskij Prospect, Moscow 119071, Russian Federation
Institute of Chemical Biology and Fundamental Medicine, Siberian Branch, Russian Academy of Sciences, 8 Lavrentiev Ave., Novosibirsk 630090, Russian Federation
Joint Russian-Vietnam Tropical Research and Test Centre, Coastal Branch, 30 Nguyen Thien Thuat, Nha Trang, Viet Nam : 660036, Красноярск, Академгородок, д. 50, стр. 50

Доп.точки доступа:
Volova, T.G.; Boyandin, A.N.; Vasiliev, A.D.; Karpov, V.A.; Prudnikova, S.V.; Mishukova, O.V.; Boyarskikh, U.A.; Filipenko, M.L.; Rudnev, V.P.; Ba Xuan, B.; Vit Dung, V.; Gitelson, I.I.

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A study of forest vegetation dynamics in the south of the Krasnoyarskii Krai in spring / M. Chernetskiy [et al.] // Advances in Space Research. - 2011. - Vol. 48, Is. 5. - P819-825, DOI 10.1016/j.asr.2011.04.032 . - ISSN 0273-1177
Кл.слова (ненормированные):
EVI -- Forestry -- MODIS -- NDVI -- Remote sensing -- Vegetation phenology -- Accurate measurement -- Annual time series -- Carbon exchange -- Data series -- Dynamic state -- Enhanced vegetation index -- EVI -- Forest vegetation -- Global scale -- Growth dynamics -- Interannual variability -- Moderate resolution imaging spectroradiometer -- MODIS -- NDVI -- Normalized difference vegetation index -- Principal components analysis -- Remote sensing applications -- Remote sensing data -- Satellite data -- Spatial structure -- Spring season -- Terrestrial ecosystems -- Vegetation dynamics -- Vegetation phenology -- Biology -- Climate models -- Dynamics -- Ecosystems -- Estimation -- Forestry -- Monitoring -- Principal component analysis -- Radiometers -- Remote sensing -- Satellite imagery -- Timber -- Time series -- User interfaces -- Vegetation -- Carbon -- Ecosystems -- Forests -- Image Analysis -- Plants -- Remote Sensing -- Time Series Analysis
Аннотация: Remote sensing applications have greatly enhanced ability to monitor and manage in the areas of forestry. Accurate measurements of regional and global scale vegetation dynamics (phenology) are required to improve models and understanding of inter-annual variability in terrestrial ecosystem carbon exchange and climate-biosphere interactions. Study of vegetation phenology is required for understanding of variability in ecosystem. In this paper, monitoring of vegetation dynamics using time series of satellite data is presented. Vegetation variability (vegetation rate) in different topoclimatic areas is investigated. Original software using IDL interactive language for processing of satellite long-term data series was developed. To investigate growth dynamics vegetation rate inferred from remote sensing was used. All estimations based on annual time series of Moderate Resolution Imaging Spectroradiometer (MODIS) imagery. Vegetation rate for Enhanced Vegetation Index (EVI) and Normalized Difference Vegetation Index (NDVI) was calculated using MODIS data. The time series covers spring seasons of each of 9 years, from 2000 to 2008. Comparison of EVI and NDVI derived growth rates has shown that NDVI derived rates reveal spatial structure better. Using long-term data of vegetation rates variance was estimated that helps to reveal areas with anomalous growth rate. Such estimation shows sensitivity degree of different areas to different topoclimatic conditions. Woods of heights depend on spatial topoclimatic variability unlike woods of lowlands. Principal components analysis shows vegetation with different rate conditions. Also it reveals vegetation of same type in areas with different conditions. It was demonstrated that using of methods for estimating the dynamic state of vegetation based on remote sensing data enables successful monitoring of vegetation phenology. В© 2011 COSPAR. Published by Elsevier Ltd. All rights reserved.

Scopus
Держатели документа:
Institute of Biophysics of SB RAS, Akademgorodok 50/50, Krasnoyarsk 660036, Russian Federation : 660036, Красноярск, Академгородок, д. 50, стр. 50

Доп.точки доступа:
Chernetskiy, M.; Pasko, I.; Shevyrnogov, A.; Slyusar, N.; Khodyayev, A.

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Results of analysis of human impact on environment using the time series of vegetation satellite images around large industrial centers / A. Shevyrnogov [et al.] // Advances in Space Research. - 2008. - Vol. 41, Is. 1. - P36-40, DOI 10.1016/j.asr.2007.02.008 . - ISSN 0273-1177
Кл.слова (ненормированные):
Industrial wastes -- Remote sensing -- Vegetation dynamics -- Vegetation index -- Image reconstruction -- Industrial economics -- Industrial wastes -- Remote sensing -- Satellite imagery -- Time series analysis -- Vegetation dynamics -- Vegetation index -- Vegetation
Аннотация: The paper shows the efficiency of an application of the vegetation index image time series to determine long-term vegetation dynamics. The influence of large industrial centers of Siberia on the near-by vegetation is demonstrated. The analysis of the data shows that the influence of industrial waste is stronger in the Siberian North. These regions are characterized by critical conditions for vegetation existence. In the south of the Krasnoyarsk region, human impact is also important, but the possibility of vegetation self-rehabilitation is higher. The present-day economic situation in Russia is unique, with a temporary abrupt fall of industrial production and its following increase. Thus, we managed to analyze the degree of human impact on the environment within a relatively short-time interval. В© 2007.

Scopus
Держатели документа:
Institute of Biophysics of SB RAS, Krasnoyarsk, 660036 Akademgorodok, Russian Federation
Institute of Computational Modeling of SB RAS, Krasnoyarsk, 660036 Akademgorodok, Russian Federation
Institute of Forest of SB RAS, Krasnoyarsk, 660036 Akademgorodok, Russian Federation
CC Krasnoyarskgeophysics, St. Partizana Zheleznyaka, 24v, Krasnoyarsk, 660022, Russian Federation : 660036, Красноярск, Академгородок, д. 50, стр. 50

Доп.точки доступа:
Shevyrnogov, A.; Vysotskaya, G.; Sukhinin, A.; Frolikova, O.; Tchernetsky, M.

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Typification of natural seasonal dynamics of vegetation to reveal impact of land surface change on environment (by satellite data) / A. Shevyrnogov [et al.] // Advances in Space Research. - 2000. - Vol. 26, Is. 7. - P1169-1172, DOI 10.1016/S0273-1177(99)01142-4 . - ISSN 0273-1177
Кл.слова (ненормированные):
ecological modeling -- ecosystem health -- land surface -- satellite data -- vegetation dynamics
Аннотация: Deep insight into types of vegetation variability provided by AVHRR space scanner images of vegetation index spatial distribution helps reveal impact of land surface changes on environment. The Institute of Computational Modeling SB RAS has developed nonparametric algorithms of automatic to classify and recognize patterns of these images which helped to reveal: (1) major variability types (generally connected); (2) areas belonging to small classes, which can be used to reveal deviations from 'normal' (e.g., forest fires, etc.); (3) deviation from a certain type of dynamics indicative of changes in condition of plants, which can be used to diagnose pathology at early stages; (4) impact of economical activities on vegetation in Norilsk area. The authors provide biological interpretation of the satellite data. Computer-animated dynamics and color maps are presented. Nonparametric algorithms of an automatic classification and pattern recognition were provided by the Institute of Computational Modeling SB RAS. (C) 2000 COSPAR. Published by Elsevier Science Ltd.

Scopus
Держатели документа:
Inst. of Biophys. of Russ. A., Siberian Branch, 660036, Krasnoyarsk, Russian Federation
Inst. of Compl. Modeling of Russ. A., Siberian Branch (SB RAS), 660036, Krasnoyarsk, Russian Federation : 660036, Красноярск, Академгородок, д. 50, стр. 50

Доп.точки доступа:
Shevyrnogov, A.; Vysotskaya, G.; Sidko, A.; Dunaev, K.

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A biological method of including mineralized human liquid and solid wastes into the mass exchange of bio-technical life support systems / S. A. Ushakova [et al.] // Advances in Space Research. - 2012. - Vol. 50, Is. 7. - P932-940, DOI 10.1016/j.asr.2012.05.023 . - ISSN 0273-1177
Кл.слова (ненормированные):
Bio-technical life support system -- Conveyor-grown uneven-aged communities of wheat and Salicornia -- Utilization of human wastes -- Age groups -- Biological methods -- Dry weight -- Expanded clay -- Harvest index -- Human waste -- Leafy vegetables -- Liquid wastes -- Mass exchange -- Mineral element -- Nutrient solution -- Plant communities -- Salicornia europaea -- Salt content -- Time interval -- Uneven-aged -- Water culture -- Wheat biomass -- Conveyors -- Incineration -- Irrigation -- Minerals -- Nutrients -- Plants (botany) -- Productivity -- Sodium chloride -- Waste incineration -- Waste utilization -- Liquids
Аннотация: The main obstacle to using mineralized human solid and liquid wastes as a source of mineral elements for plants cultivated in bio-technical life support systems (BLSS) is that they contain NaCl. The purpose of this study is to determine whether mineralized human wastes can be used to prepare the nutrient solution for long-duration conveyor cultivation of uneven-aged wheat and Salicornia europaea L. plant community. Human solid and liquid wastes were mineralized by the method of "wet incineration" developed by Yu. Kudenko. They served as a basis for preparing the solutions that were used for conveyor-type cultivation of wheat community represented by 5 age groups, planted with a time interval of 14 days. Wheat was cultivated hydroponically on expanded clay particles. To reduce salt content of the nutrient solution, every two weeks, after wheat was harvested, 12 L of solution was removed from the wheat irrigation tank and used for Salicornia europaea cultivation in water culture in a conveyor mode. The Salicornia community was represented by 2 age groups, planted with a time interval of 14 days. As some portion of the nutrient solution used for wheat cultivation was regularly removed, sodium concentration in the wheat irrigation solution did not exceed 400 mg/L, and mineral elements contained in the removed portion were used for Salicornia cultivation. The experiment lasted 4 months. The total wheat biomass productivity averaged 30.1 gВ·m -2В·day -1, and the harvest index amounted to 36.8%. The average productivity of Salicornia edible biomass on a dry weight basis was 39.3 gВ·m -2В·day -1, and its aboveground mass contained at least 20% of NaCl. Thus, the proposed technology of cultivation of wheat and halophyte plant community enables using mineralized human wastes as a basis for preparing nutrient solutions and including NaCl in the mass exchange of the BLSS; moreover, humans are supplied with additional amounts of leafy vegetables. В© 2012 COSPAR. Published by Elsevier Ltd. All rights reserved.

Scopus
Держатели документа:
Institute of Biophysics SB RAS, Akademgorodok, Krasnoyarsk 660036, Russian Federation
Siberian State Technological University, 82, Mir Avenue, Krasnoyarsk 660049, Russian Federation : 660036, Красноярск, Академгородок, д. 50, стр. 50

Доп.точки доступа:
Ushakova, S.A.; Tikhomirov, A.A.; Tikhomirova, N.A.; Kudenko, Y.A.; Litovka, Y.A.; Anishchenko, O.V.

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Influence of excitation light intensity and leaf age on the slow chlorophyll fluorescence transient in radish / T. V. Nesterenko, A. A. Tikhomirov, V. N. Shikhov // Biophysics (Russian Federation). - 2012. - Vol. 57, Is. 4. - P464-468, DOI 10.1134/S0006350912040136 . - ISSN 0006-3509
Кл.слова (ненормированные):
leaf ontogeny -- light dependence -- slow fluorescence induction -- temporal indices -- Raphanus sativus
Аннотация: The temporal characteristics of the slow phase of chlorophyll fluorescence induction-T0. 5 (half-decay time) and tmin (an integral-based index of the variable emission rate)-as well as the popular amplitude index FP/FS were determined at different excitation light intensities (Iex [400-500 nm] of 20-80 W/m2) in dark-adapted leaves of different age (3-24 days) taken from radish plants grown under continuous light of 100 W/m2 PAR. All the profiles thus obtained were mutually consistent, and the age-related variations were minimized at Iex > 40 W/m2; at that the age-averaged temporal indices proved to be more light-responsive than the standard amplitude ratio. В© 2012 Pleiades Publishing, Ltd.

Scopus
Держатели документа:
Institute of Biophysics, Siberian Branch, Russian Academy of Sciences, Akademgorodok, Krasnoyarsk 660036, Russian Federation : 660036, Красноярск, Академгородок, д. 50, стр. 50

Доп.точки доступа:
Nesterenko, T.V.; Tikhomirov, A.A.; Shikhov, V.N.

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Chlorophyll fluorescence induction and estimation of plant resistance to stress factors / T. V. Nesterenko, A. A. Tikhomirov, V. N. Shikhov // Zhurnal Obshchei Biologii. - 2007. - Vol. 68, Is. 6. - С. 444-458 . - ISSN 0044-4596
Кл.слова (ненормированные):
chlorophyll -- adaptation -- cucumber -- fluorescence -- growth, development and aging -- metabolism -- physiology -- plant leaf -- review -- Adaptation, Physiological -- Chlorophyll -- Cucumis sativus -- Fluorescence -- Plant Leaves -- Cucumis sativus
Аннотация: The usage of chlorophyll fluorescence induction (CFI) for estimating various types of plant resistance (primary, general, initial, adaptive) to stress factors is reviewed. The necessity of ontogenetic approach (considering the age-specific properties of the photosynthetic apparatus) in determining general and adaptive resistance of plants to prolonged action of stress factors by the CFI method is argued. In the plant Cucumbis sativus L., the possibility is shown of using age-specific qualitative and quantitative traits of leaf CFI (changes in the shape of chlorophyll fluorescence induction curves and in the dynamics of CFI parameters in the course of leaf ontogeny) for comparative study of differences between fully active and stressed plants. Possible criteria are suggested for estimating the effect of outer stress factors by the presence or absence of a steady-state phase in the dynamics of CFI parameters during leaf ontogeny. It is also suggested to use the duration of the steady-state phase following the termination of leaf growth (estimated by the dynamics of the slow phase of CFI as the ratio of fluorescence intensity at the peak P and the steady-state fluorescence intensity, FP/FS, or as the viability index Rfd) and the variability of CFI parameters during this period as qualitative estimates of plant resistance to prolonged action of stress factors.

Scopus
Держатели документа:
Institute of Biophysics, Siberian Branch of Russian Academy of Sciences, Akademgorodok, Krasnoyarsk 660036, Russian Federation : 660036, Красноярск, Академгородок, д. 50, стр. 50

Доп.точки доступа:
Nesterenko, T.V.; Tikhomirov, A.A.; Shikhov, V.N.

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Light intensity and production parameters of phytocenoses cultivated on soil-like substrate under controled environment conditions / A. A. Tikhomirov [et al.] // Advances in Space Research. - 2003. - Vol. 31, Is. 7. - P1775-1780, DOI 10.1016/S0273-1177(03)80020-0 . - ISSN 0273-1177
Кл.слова (ненормированные):
Bacteria -- Biology -- Crops -- Photosynthesis -- Substrates -- Light intensity -- Space research -- biosphere -- Biomass -- Carbon Dioxide -- Colony Count, Microbial -- Culture Media -- Ecological Systems, Closed -- Enterobacteriaceae -- Life Support Systems -- Light -- Photosynthesis -- Plant Transpiration -- Raphanus -- Soil Microbiology -- Triticum -- Water Microbiology
Аннотация: To increase the degree of closure of biological life support systems of a new generation, we used vermicomposting to involve inedible phytomass in the intra-system mass exchange. The resulting product was a soil-like substrate, which was quite suitable for growing plants (Manukovsky et al. 1996, 1997). However, the soil-like substrate can be regarded as a candidate for inclusion in a system only after a comprehensive examination of its physical, chemical, and other characteristics. An important criterion is the ability of the soil-like substrate to supply the necessary mineral elements to the photosynthesizing component under the chosen cultivation conditions. Thus, the purpose of this work was to study the feasibility of enhancing the production activity of wheat and radish crops by varying the intensity of photosynthetically active radiation, without decreasing the harvest index. The increase of light intensity from 920 to 1150 ?molВ·m -2В·s -1 decreased the intensity of apparent photosynthesis of the wheat crops and slightly increased the apparent photosynthesis of the radish crops The maximum total and grain productivity (kg/m 2) of the wheat crops was attained at the irradiance of 920 ?molВ·m -2В·s -1. Light intensity of 1150 ?molВ·m -2В·s -1 decreased the productivity of wheat plants and had no significant effect on the productivity of the radish crops (kg/m 2) as compared to 920 ?molВ·m 2В·s -1. The qualitative and quantitative composition of microflora of the watering solution and substrate was determined by the condition of plants, developmental phase and light intensity. By the end of wheat growth under 1150 ?molВ·m -2В·s -1 the numbers of bacteria of the coliform family and phytopathogenic bacteria in the watering solution and substrate were an order of magnitude larger than under other illumination conditions. The obtained data suggest that the cultivation of plants in a life support system on soil-like substrate from composts has a number of advantages over the cultivation on neutral substrates, which require continual replenishment of the plant nutrient solution from the system's store to complement the macro- and microelements. Yet, a number of problems arise, including those related to the controlling of the production activity of the plants by the intensity of photosynthetically active radiation. It is essential to understand why the intensity of production processes is limited at higher irradiation levels and to overcome the factors responsible for this, so that the soil-like substrate could have an even better chance in the competition for the best plant cultivation technology to be used in biological life support systems. В© 2003 COSPAR. Published by Elsevier Science Ltd. All rights reserved.

Scopus
Держатели документа:
Institute of Biophysics, RAS SB, Krasnoyarsk 660036, Russian Federation
Tomsk State University, Lenin street, 36, Tomsk 634050, Russian Federation
LGCB, Universte B. Pascal, BP206, Aubiere cedex 63174, France
ESA/ESTEC, Noordwijk, AG 2200, Netherlands : 660036, Красноярск, Академгородок, д. 50, стр. 50

Доп.точки доступа:
Tikhomirov, A.A.; Ushakova, S.A.; Gribovskaya, I.A.; Tirranen, L.S.; Manukovsky, N.S.; Zolotukhin, I.G.; Karnachuk, R.A.; Gros, J.-B.; Lasseur, Ch.

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A study of the spectral brightness and reflectance of the Krasnoyarsk and Dnepr reservoir systems / A. F. Sid'ko // Oceanology. - 2005. - Vol. 45, Is. 2. - P186-193 . - ISSN 0001-4370
Кл.слова (ненормированные):
alga -- brightness temperature -- phytoplankton -- remote sensing -- reservoir -- spectral reflectance -- Dneprodzerzhinsk Reservoir -- Eastern Europe -- Eastern Hemisphere -- Eurasia -- Europe -- Krasnoyarsk [Russian Federation] -- Russian Federation -- Ukraine -- World -- algae -- Bacillariophyta -- Chlorophyta -- Cyanobacteria -- Dinophyceae -- Protococcus -- uncultured cyanobacterium
Аннотация: The brightness spectra of the Krasnoyarsk and Dnepr reservoir systems are presented for various periods of their development, from the beginning of their filling to the final stage of their formation. The curves of the surface distribution of chlorophyll a, which were remotely obtained from the brightness coefficient spectra, are found to be monotonic when diatomaceous, green protococcus, and dinophyte algae dominate in the phytoplankton. In the presence of blue-green algae, the curve of the distribution of phytoplankton on the surface is essentially irregular. The irregularities range from tens to hundreds of meters with sharp gradients of the phytoplankton concentration. The negative values of the VI color index change for positive ones when the concentration of chlorophyll a of the phytoplankton in the subsurface layer Cchl > 250-270 mg/m3. This is associated with the change in the species composition of the phytoplankton from the dominating diatom forms to bluegreen algae. Copyright В© 2005 by Pleiades Publishing, Inc.

Scopus
Держатели документа:
Institute of Biophysics, Siberian Branch, Russian Academy of Sciences, Krasnoyarsk, Russian Federation : 660036, Красноярск, Академгородок, д. 50, стр. 50

Доп.точки доступа:
Sid'ko, A.F.

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10.

Investigations of the Krasnoyarsk Reservoir waters based on the multispectral satellite data [Text] / M. . Chernetskiy [et al.] // Adv. Space Res. - 2009. - Vol. 43, Is. 2. - P206-213, DOI 10.1016/j.asr.2008.04.002. - Cited References: 24 . - 8. - ISSN 0273-1177

РУБ Astronomy & Astrophysics + Geosciences, Multidisciplinary + Meteorology & Atmospheric Sciences
Рубрики:
CHLOROPHYLL CONCENTRATION
Кл.слова (ненормированные):
MODIS -- AVHRR -- Classification -- Continental water bodies -- Spectral variability -- Phytoplankton -- Krasnoyarsk Reservoir
Аннотация: In this work historical investigations and modern results of classification of the Krasnoyarsk Reservoir are presented. The paper presents results of studying the dynamics of phytopigments and other optically active components, using multispectral satellite data. Several approaches to interpreting satellite data for optically complex inland water bodies are offered. Based on results of historical investigations it is shown that the spatial distribution of phytoplankton in the reservoir stems back to the time of its formation. Color index in the red spectral region (CIR) is introduced. A relationship between the color index and chlorophyll concentration is investigated. The CIR, derived from the AVHRR data, has been found to be related to chlorophyll concentration. Based on MODIS data, the waters of the Krasnoyarsk Reservoir have been classified in accordance with their optical spectral variability, using the technique of unsupervised Iso-Data classification. An empirical relationship between multispectral MODIS data and the ground-truth measurements of chlorophyll concentration has been found. (C) 2008 COSPAR. Published by Elsevier Ltd. All rights reserved.

Держатели документа:
[Chernetskiy, M.
Shevyrnogov, A.
Shevnina, S.
Sidko, A.] SB RAS, Inst Biophys, Krasnoyarsk 660036, Akademgorodok, Russia
[Vysotskaya, G.] SB RAS, Inst Computat Modeling, Krasnoyarsk 660036, Akademgorodok, Russia : 660036, Красноярск, Академгородок, д. 50, стр. 50

Доп.точки доступа:
Chernetskiy, M...; Shevyrnogov, A...; Shevnina, S...; Vysotskaya, G...; Sidko, A...

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11.

Analysis of the variability of temperature gradient in the ocean frontal zones based on satellite data / A. V. Kartushinsky, A. Y. Sidorenko // Advances in Space Research. - 2013, DOI 10.1016/j.asr.2013.07.023 . - ISSN 0273-1177
Кл.слова (ненормированные):
Frontal zones -- North Atlantic oscillation -- Sea surface temperature gradients -- South oscillation - El Ninjo -- Thermohaline circulation -- Variability of gradients
Аннотация: AVHRR MCSST data for the periods 1982-2000 (mean weekly data) were used to calculate mean gradient fields in the ocean for different periods of time. Three-month averaged sea surface temperature gradients (SSTG) and their mean seasonal variations have been studied for 25 points in the large-scale oceanic fronts zones. Major oceanic fronts in the Atlantic and Pacific have been identified and compared in literature. In the North Atlantic and Pacific, the areas under study were the North Polar Front and Subpolar Fronts. In the South Atlantic and Pacific we studied the region of the Antarctic Circumpolar Current (ACC) and the fronts formed by this current, known as the South Polar Front, and the Subantarctic Front. SSTG were also calculated for El Nino (Southeast Pacific) and Benguela Current (Southeast Atlantic). In warm periods seasonal SSTG in the North Atlantic markedly increased and exhibit some interannual cycles. The correlation between the North Atlantic Oscillation index and seasonal SSTG for a single point in the Gulf Stream zone can be the key point for evaluation of heat transfer by the currents to the coast of East Europe. In the Southern Atlantic, the SSTG values are low during the cold period (summer in the southern hemisphere) in the ACC zone and increase in the warm season (winter in the southern hemisphere). It also exhibits interannual cycles. In the Northwest Pacific for some points in the Subpolar Front the SSTG values are high in the cold period (winter). Here at seven points in the spring of 1993 and 2000 the calculations disclosed significant increase of the gradient. In these years, the anomalous SSTG in Subpolar Front and South Polar Front were found to vary synchronously in both hemispheres, with maximum intensity in spring (North Pacific) and in summer (South Pacific). Mean annual SSTG in the El Nino zone and south oscillation index have been found to exhibit some correlation. Major jet currents periodically form high-gradient temperature fields and from the temperature satellite data we can derive information about variation in the large-scale fronts in the Global Ocean. В© 2013 COSPAR.

Scopus
Держатели документа:
Siberian Federal University, 79 Svobodny, Krasnoyarsk 660041, Russia
Institute of Biophysics, Russian Academy of Sciences, Siberian Branch, Akademgorodok, Krasnoyarsk 660036, Russia : 660036, Красноярск, Академгородок, д. 50, стр. 50

Доп.точки доступа:
Kartushinsky, A.V.; Sidorenko, A.Y.

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12.

The analysis of seasonal activity of photosynthesis and efficiency of various vegetative communities on a basis NDVI for modeling of biosphere processes / Yu. D. Ivanova [et al.] // Advances in Space Research. - 2007. - Vol. 39, Is. 1. - P95-99, DOI 10.1016/j.asr.2006.02.028 . - ISSN 0273-1177
Кл.слова (ненормированные):
NDVI -- Plant communities -- Synoptic parameters -- Biomass -- Climatology -- Parameter estimation -- Photosynthesis -- Plants (botany) -- Statistical methods -- Time series analysis -- NDVI -- Plant communities -- Seasonal activity -- Synoptic parameters -- Vegetation
Аннотация: NDVI (Normalized Difference Vegetation Index) is proposed as an area-dependent climatic variable, which reflects climatically significant events and processes. NDVI is taken as a simple quantitative indicator of the amount of photosynthetically active biomass. Mean values of NDVI have been calculated for the period between 1996 and 2001. NDVI time series have been analyzed in conjunction with meaningful synoptic parameters that influence the behavior of plants in different plant communities of Eastern Siberia (tundra, taiga, and steppe). Based on GIS technologies, statistical tests have been carried out and correlations between the study parameters have been found. В© 2007.

Scopus
Держатели документа:
Institute of Biophysics, Russian Academy of Sciences, Siberian Branch, Akademgorodok, Krasnoyarsk, 660036, Russian Federation
Krasnoyarsk State Technical University, Kirensky 26, Krasnoyarsk, 660074, Russian Federation : 660036, Красноярск, Академгородок, д. 50, стр. 50

Доп.точки доступа:
Ivanova, Yu.D.; Bartsev, S.I.; Pochekutov, A.A.; Kartushinsky, A.V.

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13.

Green-Fluorescent Protein from the Bioluminescent Jellyfish Clytia gregaria Is an Obligate Dimer and Does Not Form a Stable Complex with the Ca2+-Discharged Photoprotein Clytin [Text] / N. P. Malikova [et al.] // Biochemistry. - 2011. - Vol. 50, Is. 20. - P4232-4241, DOI 10.1021/bi101671p. - Cited References: 50. - This work was supported by NATO Collaborative Linkage Grant 979229, Grants SB RAS No. 2 and RFBR 08-04-92209, 09-04-12022, and 09-04-00172, the MCB program of the Russian Academy of Sciences, and Bayer AG. . - ISSN 0006-2960

РУБ Biochemistry & Molecular Biology
Рубрики:
VIBRIO-FISCHERI Y1
   ENERGY-TRANSFER
   CORRELATION SPECTROSCOPY
   BACTERIAL LUCIFERASE
   REFRACTIVE-INDEX
   PHOTOBACTERIUM-LEIOGNATHI
   POLARIZED FLUORESCENCE
   EXCITATION TRANSFER
   RECOMBINANT OBELIN
   LUMAZINE PROTEIN
Аннотация: Green-fluorescent protein (GFP) is the origin of the green bioluminescence color exhibited by several marine hydrozoans and anthozoans. The mechanism is believed to be Forster resonance energy transfer (FRET) within a luciferase GFP or photoprotein-GFP complex. As the effect is found in vitro at micromolar concentrations, for FRET to occur this complex must have an affinity in the micromolar range. We present here a fluorescence dynamics investigation of the recombinant bioluminescence proteins from the jellyfish Clytia gregaria, the photoprotein clytin in its Ca2+-discharged form that is highly fluorescent (lambda(max) = 506 nm) and its GFP (cgreGFP; lambda(max) = 500 nm). Ca2+-discharged clytin shows a predominant fluorescence lifetime of 5.7 ns, which is assigned to the final emitting state of the bioluminescence reaction product, coelenteramide anion, and a fluorescence anisotropy decay or rotational correlation time of 12 ns (20 degrees C), consistent with tight binding and rotation with the whole protein. A 34 ns correlation time combined with a translational diffusion constant and molecular brightness from fluorescence fluctuation spectroscopy all confirm that cgreGFP is an obligate dimer down to nanomolar concentrations. Within the dimer, the two chromophores have a coupled excited-state transition yielding fluorescence depolarization via FRET with a transfer correlation time of 0.5 ns. The 34 ns time of cgreGFP showed no change upon addition of a 1000-fold excess of Ca2+-discharged clytin, indicating no stable complexation below 0.2 mM. It is proposed that any bioluminescence FRET complex with micromolar affinity must be one formed transiently by the cgreGFP dimer with a short-lived (millisecond) intermediate in the clytin reaction pathway.

Держатели документа:
[Lee, John] Univ Georgia, Dept Biochem & Mol Biol, Athens, GA 30602 USA
[Malikova, Natalia P.
Vysotski, Eugene S.] Russian Acad Sci, Siberian Branch, Photobiol Lab, Inst Biophys, Krasnoyarsk 660036, Russia
[Visser, Nina V.
van Hoek, Arie] Wageningen Univ, Biophys Lab, NL-6703 HA Wageningen, Netherlands
[Visser, Antonie J. W. G.] Wageningen Univ, Biochem Lab, NL-6703 HA Wageningen, Netherlands
[Visser, Nina V.
van Hoek, Arie
Visser, Antonie J. W. G.] Wageningen Univ, Microspect Ctr, NL-6703 HA Wageningen, Netherlands
[Skakun, Victor V.] Belarusian State Univ, Dept Syst Anal, Minsk 220050, Byelarus
ИБФ СО РАН : 660036, Красноярск, Академгородок, д. 50, стр. 50

Доп.точки доступа:
Malikova, N.P.; Visser, N.V.; van Hoek, A...; Skakun, V.V.; Vysotski, E.S.; Lee, J...; Visser, AJWG

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14.

Determination of the refractive index and thickness of the coat of particles of a dispersed blood substitute based on perfluoro-compounds / I. N. Kuznetsova [et al.] // Biophysics. - 1988. - Vol. 33, Is. 1. - P. 137-142 . - ISSN 0006-3509
Аннотация: Taking into account the structural features of particles of the emulsions of organoperfluorocompounds (OPFC) using the equations obtained earlier by one of the authors in solving the general problem of the interaction of light with bi- and trilayer optically heterogeneous spheres the authors calculate the refractive index of the particles of a dispersed OPFC-based blood substitute. The possibility of averaging the refractive index of bilayer particles of an OPFC emulsion by volume is shown. Independent optical methods have been used to determine experimentally the value of the refractive index of OPFC particles and evaluate the thickness of their coat consisting of a surface-active substance. В© 1989.

Scopus
Держатели документа:
Leningrad Haematology and Blood Transfusion Research Institute Kalinin Polytechnic Institute, Leningrad, Russian Federation
Institute of Biophysics, Siberian Division, U.S.S.R. Academy of Sciences, Krasnoyarsk, Russian Federation : 660036, Красноярск, Академгородок, д. 50, стр. 50

Доп.точки доступа:
Kuznetsova, I.N.; Byezrukova, A.G.; Lopatin, V.N.; Parshin, A.V.

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15.

On the problem of genome redundancy in viruses and prokaryotes [Text] / M. G. Sadovsky // Russ. J. Genet. - 2002. - Vol. 38, Is. 5. - P. 575-581, DOI 10.1023/A:1015503617023. - Cited References: 10 . - ISSN 1022-7954

РУБ Genetics & Heredity

Аннотация: A specific index of nucleotide sequence redundancy, the specific restriction length of a finite frequency dictionary, was determined for a complete set of genes in some viral genomes and a genome of a bacterium, Bacillus subtilis. The distribution of the gene number over the specific restriction length was shown to be bimodal for viral genomes and unimodal for the Bac. subtilis genome. These results agree with earlier data.

WOS
Держатели документа:
Russian Acad Sci, Inst Biophys, Krasnoyarsk 660036, Russia
ИБФ СО РАН : 660036, Красноярск, Академгородок, д. 50, стр. 50

Доп.точки доступа:
Sadovsky, M.G.

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16.

Light intensity and production parameters of phytocenoses cultivated on soil-like substrate under controled environment conditions [Text] / A. A. Tikhomirov [et al.] ; ed. M Nelson [et al.] // SPACE LIFE SCIENCES: CLOSED ARTIFICIAL ECOSYSTEMS AND LIFE SUPPORT SYSTEMS. Ser. ADVANCES IN SPACE RESEARCH : PERGAMON-ELSEVIER SCIENCE LTD, 2003. - Vol. 31: Meeting of F4 1 Session of the 34th Scientific Assembly of COSPAR (OCT, 2002, HOUSTON, TEXAS), Is. 7. - P. 1775-1780, DOI 10.1016/S0273-1177(03)00120-0. - Cited References: 11 . - ISBN 0273-1177

РУБ Engineering, Aerospace + Astronomy & Astrophysics + Ecology + Geosciences, Multidisciplinary + Meteorology & Atmospheric Sciences
Рубрики:
SYSTEM
Аннотация: To increase the degree of closure of biological life support systems of a new generation, we used vermicomposting to involve inedible phytomass in the intra-system mass exchange. The resulting product was a soil-like substrate, which was quite suitable for growing plants (Manukovsky et al. 1996, 1997). However, the soil-like substrate can be regarded as a candidate for inclusion in a system only after a comprehensive examination of its physical, chemical, and other characteristics. An important criterion is the ability of the soil-like substrate to supply the necessary mineral elements to the photosynthesizing component under the chosen cultivation conditions. Thus, the purpose of this work was to study the feasibility of enhancing the production activity of wheat and radish crops by varying the intensity of photosynthetically active radiation, without decreasing the harvest index. The increase of light intensity from 920 to 1150 mumol(.)m(-2.)s(-1) decreased the intensity of apparent photosynthesis of the wheat crops and slightly increased the apparent photosynthesis of the radish crops The maximum total and grain productivity (kg/m(2)) of the wheat crops was attained at the irradiance of 920 mumol(.)m(-2.)s(-1). Light intensity of 1150 mumol(.)m(2.)s(-1) decreased the productivity of wheat plants and had no significant effect on the productivity of the radish crops (kg/m(2)) as compared to 920 mumol(.)m(-2.)s(-2). The qualitative and quantitative composition of microflora of the watering solution and substrate was determined by the condition of plants, developmental phase and light intensity. By the end of wheat growth under 1150 mumol(.)m(-2.)s(-1) the numbers of bacteria of the coliform family and phytopathogenic bacteria in the watering solution and substrate were an order of magnitude larger than under other illumination conditions. The obtained data suggest that the cultivation of plants in a life support system on soil-like substrate from composts has a number of advantages over the cultivation on neutral substrates, which require continual replenishment of the plant nutrient solution from the system's store to complement the macro- and micro- elements. Yet, a number of problems arise, including those related to the controlling of the production activity of the plants by the intensity of photosynthetically active radiation. It is essential to understand why the intensity of production processes is limited at higher irradiation levels and to overcome the factors responsible for this, so that the soil-like substrate could have an even better chance in the competition for the best plant cultivation technology to be used in biological life support systems. (C) 2003 COSPAR. Published by Elsevier Science Ltd. All rights reserved.

WOS
Держатели документа:
RAS SB, Inst Biophys, Krasnoyarsk 660036, Russia
Tomsk VV Kuibyshev State Univ, Tomsk 634050, Russia
Univ Clermont Ferrand, LGCB, F-63174 Aubiere, France
European Space Agcy, European Space Technol Ctr, NL-2200 AG Noordwijk, Netherlands
ИБФ СО РАН : 660036, Красноярск, Академгородок, д. 50, стр. 50

Доп.точки доступа:
Tikhomirov, A.A.; Ushakova, S.A.; Gribovskaya, I.A.; Tirranen, L.S.; Manukovsky, N.S.; Zolotukhin, I.G.; Karnachuk, R.A.; Gros, J.B.; Lasseur, C...; Nelson, M \ed.\; Pechurkin, NS \ed.\; Dempster, WF \ed.\; Somova, LA \ed.\; Somo, , LA \ed.\

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17.

Characteristics of slow induction curve of chlorophyll fluorescence and CO2 exchange for the assessment of plant heat tolerance at various levels of light intensity [Text] / E. N. Zavorueva, S. A. Ushakova // Russ. J. Plant Physiol. - 2004. - Vol. 51, Is. 3. - P. 294-301, DOI 10.1023/B:RUPP.0000028674.39572.1c. - Cited References: 18 . - ISSN 1021-4437

РУБ Plant Sciences

Кл.слова (ненормированные):
Triticum aestivum -- Raphanus sativus var. minor -- fluorescence -- heat tolerance -- pigments -- CO2 exchange
Аннотация: The heat tolerance of wheat (Triticum aestivum L.) and radish (Raphanus sativus L. var. minor) cenoses exposed to elevated and damaging air temperatures (35 degreesC for 20 h, 45 degreesC for 7 h) under photoculture conditions at various levels of photosynthetically active radiation (PAR) was assessed by measuring characteristics of the slow induction curve of chlorophyll fluorescence at 682 and 734 nm and the CO2 exchange rate. Irrespective of the illumination level, the exposure of the cenoses to 35 degreesC did not induce irreversible changes in the plant photosynthetic apparatus. The lowest extent of damage to wheat and radish cenoses exposed to 45 degreesC was observed at 150 W/m(2) of PAR, whereas the highest damage of the plants was observed at an illumination level that was close to the compensation point of the cenose photosynthesis (50-70 W/m(2) of PAR at air temperature of 24 degreesC). Viability index proved to be the most sensitive. characteristic, compared to other characteristics, which were determined by measuring the slow phase of fluorescence induction at 682 and 734 nm. In the cenoses studied, the pattern of changes in the viability index in response to a stress factor was close to the changes in the photosynthetic rate.

WOS
Держатели документа:
Krasnoyarsk State Architectural & Bldg Acad, Krasnoyarsk, Russia
Russian Acad Sci, Inst Biophys, Siberian Div, Krasnoyarsk 660036, Russia
ИБФ СО РАН : 660036, Красноярск, Академгородок, д. 50, стр. 50

Доп.точки доступа:
Zavorueva, E.N.; Ushakova, S.A.

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18.

Chlorophyll fluorescence as an indicator of age-dependent changes in photosynthetic apparatus of wheat leaves [Text] / T. V. Nesterenko, V. N. Shikhov, A. A. Tikhomirov // Russ. J. Plant Physiol. - 2015. - Vol. 62, Is. 3. - P307-313, DOI 10.1134/S1021443715020144. - Cited References:30. - This work was supported by the State Assignment, topic no. 56.1.4, section VI of the Program for Basic Research of the State Academies of Sciences for 2013-2020. . - ISSN 1021-4437. - ISSN 1608-3407

РУБ Plant Sciences
Рубрики:
LEAF SENESCENCE
   ONTOGENIC APPROACH
   LIGHT DEPENDENCE
   PARAMETERS
Кл.слова (ненормированные):
Triticum sativus -- chlorophyll fluorescence parameters -- actinic light -- intensity -- leaf ontogeny
Аннотация: Wheat (Triticum sativus L.) seedlings of various ages (2- to 16-day-old plants) were used to study age-dependent changes in the chlorophyll fluorescence induction (CFI) at various light intensities during flu- orescence measurements. Plants were raised in a growth chamber using hydroponics with expanded clay, controlled environmental conditions, and 690 A mu mol/(m(2) s) photon flux density (PFD) of photosynthetically active radiation (PAR). Parameters of CFI were determined under actinic PFD of 380, 580, 820, and 1340 A mu mol/(m(2) s) PAR. The fifth leaf from the stem base, exposed to uniform lighting, was sampled for measurements. This leaf emerged at the plant age of 16 days. Based on fluorescence data, we calculated the maximal photochemical quantum yield of photosystem II (F (v)/F (m)), the effective photochemical quantum yield of PSII (Yield), parameters of photochemical (qP) and non-photochemical (qN and NPQ) quenching of chlorophyll fluorescence, the F (p)/F (t) ratio, and the "vitality index" (fluorescence decrease ratio, R (fd)). At moderate actinic PFD, applied commonly in PAM fluorometers (about 380 A mu mol/(m(2) s)), age-dependent changes in NPQ, F (p)/F (t), and R (fd) were observed. Analysis of CFI parameters in wheat leaves of different ages at PFD increasing from 380 to 820 A mu mol/(m(2) s) revealed that R (fd), NPQ, and qN are the most sensitive markers of the leaf age among all parameters tested. These suitable indicators can be used for rapid assessment of the leaf age.

WOS
Держатели документа:
Russian Acad Sci, Siberian Branch, Inst Biophys, Krasnoyarsk 660036, Russia.

Доп.точки доступа:
Nesterenko, T. V.; Shikhov, V. N.; Tikhomirov, A. A.; section VI of the Program for Basic Research of the State Academies of Sciences [56.1.4]

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19.

Use of the aquatic plant Elodea canadensis to assess toxicity and genotoxicity of Yenisei River sediments / T. A. Zotina [et al.] // Environ. Toxicol. Chem. - 2015. - Vol. 34, Is. 10. - P2310-2321, DOI 10.1002/etc.3057 . - ISSN 0730-7268
Кл.слова (ненормированные):
Aquatic plants -- Biomarkers -- Genotoxicity -- Sediment quality -- Sediment toxicity -- Biomarkers -- Chromosomes -- Cytotoxicity -- Pollution -- Pollution control -- Radioactive waste disposal -- Radioactivity -- River pollution -- Sediments -- Toxicity -- Aquatic plants -- Genotoxicities -- Laboratory bioassay -- Radioactive contamination -- Radioactive pollution -- Sediment quality -- Sediment toxicity -- Toxicity endpoints -- Rivers -- Article -- bioassay -- controlled study -- cytotoxicity -- Elodea canadensis -- environmental exposure -- genotoxicity -- indicator organism -- lake sediment -- mitosis index -- nonhuman -- plant growth -- plant root -- priority journal -- radioactive pollution -- river -- root length -- Russian Federation -- sensitivity analysis -- shoot -- toxicity testing -- Elodea -- Elodea canadensis
Аннотация: The toxicity, cytotoxicity, and genotoxicity of bulk sediments from the Yenisei River (Siberia, Russia) were estimated in laboratory bioassays based on several endpoints in the aquatic plant Elodea canadensis. The bottom sediment samples were collected in the Yenisei River upstream and downstream of the sources of chemical and radioactive contamination. The testing revealed different sensitivities of Elodea endpoints to the quality of the bottom sediment: weight of shoots
Scopus,
WOS
Держатели документа:
Institute of Biophysics, Siberian Branch of the Russian Academy of Sciences, Krasnoyarsk, Russian Federation

Доп.точки доступа:
Zotina, T. A.; Trofimova, E. A.; Medvedeva, M. Y.; Dementyev, D. V.; Bolsunovsky, A. Y.

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20.

The influence of altitudinal zonality on spectral characteristics (MODIS/Terra) mountain forests of Western Sayan / N. Kukoba, Y. Ivanova, I. Botvich // Climate Change Impacts on High-Altitude Ecosystems . - 2015. - P637-643, DOI 10.1007/978-3-319-12859-7_26 . - ISBN 9783319128597 (ISBN); 9783319128580 (ISBN)
Кл.слова (ненормированные):
Mountain forests of Siberia -- Net primary production (NPP) -- Vegetation indices
Аннотация: The purpose of this study is to find a relationship between changes in spectral characteristics (MODIS/Terra) of mountain forests and the altitude at which they grow. In the study area, which is located in the West Sayan Mountains (in South Siberia), the types of forest ecosystems change markedly with altitude. The study uses the data of the MODIS-NPP model intended for the evaluation of global net production. Results of the study show that the best approach to dividing mountain forests into different types is to use 8-day composites of satellite data collected at the beginning of the growing season (April-May). This is the time when the most significant differences are recorded between vegetation indices, including Normalized Difference Vegetation Index (NDVI), LAI, and EVI of the mountain forests growing in different altitudinal zones. © Springer International Publishing Switzerland 2015.

Scopus
Держатели документа:
Siberian Federal University, Krasnoyarsk, Russian Federation
Institute of Biophysics SB RAS, Krasnoyarsk, Russian Federation

Доп.точки доступа:
Kukoba, N.; Ivanova, Y.; Botvich, I.

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