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Microbiological and isotopic-geochemical investigations of meromictic lakes in Khakasia in winter / A. S. Savvichev [и др.] // Mikrobiologiya. - 2005. - Vol. 74, Is. 4. - С. 552-561 . - ISSN 0026-3656
Кл.слова (ненормированные):
Meromictic water bodies -- Microbial production and oxidation of methane -- Photosynthesis -- Stable isotopes of carbon (? 13C) and sulfur (? 34S) -- Sulfate reduction -- Bacteria (microorganisms) -- Chlorobi -- Chromatiaceae -- Lamprocystis purpurea -- Pelodictyon luteolum -- Photobacteria -- carbon -- fresh water -- methane -- sulfate -- sulfur -- article -- bacterial phenomena and functions -- bacterium -- comparative study -- isolation and purification -- metabolism -- microbiology -- oxidation reduction reaction -- photosynthesis -- Russian Federation -- season -- species difference -- Bacteria -- Bacterial Physiology -- Carbon Isotopes -- Fresh Water -- Methane -- Oxidation-Reduction -- Photosynthesis -- Seasons -- Siberia -- Species Specificity -- Sulfates -- Sulfur Isotopes -- Water Microbiology
Аннотация: Microbiological and isotopic-geochemical investigations of the brackish meromictic lakes Shira and Shunet were performed in the steppe region of Khakasia in winter. Measurements made with a submersed sensor demonstrated that one-meter ice transmits light in a quantity sufficient for oxygenic and anoxygenic photosynthesis. As in the summer season, in the community of phototrophic bacteria found in Lake Shira, the purple sulfur bacteria Amoebobacter purpureus dominated, whereas, in Lake Shunet, the green sulfur bacteria Pelodictyon luteolum were predominant. Photosynthetic production, measured using the radioisotopic method, was several times lower than that in summer. The rates of sulfate reduction and production and oxidation of methane in the water column and bottom sediments were also lower than those recorded in summer. The process of anaerobic methane oxidation in the sediments was an exception, being more intense in winter than in summer. The data from radioisotopic measurements of the rates of microbial processes correlate well with the results of determination of the isotopic composition of organic and mineral carbon (? 13C) and hydrogen sulfide and sulfate (? 34S) and suggest considerable seasonal variations in the activity of the microbial community in the water bodies investigated.

Scopus
Держатели документа:
Winogradsky Institute of Microbiology, Russian Academy of Sciences, pr. 60-letiya Oktyabrya, Moscow, 117811, Russian Federation
Institute of Biophysics, Siberian Division, Russian Academy of Sciences, Krasnoyarsk 36, 660036, Russian Federation : 660036, Красноярск, Академгородок, д. 50, стр. 50

Доп.точки доступа:
Savvichev, A.S.; Rusanov, I.I.; Rogozin, D.Yu.; Zakharova, E.E.; Lunina, O.N.; Bryantseva, I.A.; Yusupov, S.K.; Pimenov, N.V.; Degermendzhi, A.G.; Ivanov, M.V.

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Microbiological and isotopic-geochemical investigations of meromictic lakes in Khakasia in winter / A. S. Savvichev [et al.] // Microbiology. - 2005. - Vol. 74, Is. 4. - P477-485, DOI 10.1007/s11021-005-0092-x . - ISSN 0026-2617
Кл.слова (ненормированные):
Meromictic water bodies -- Microbial production and oxidation of methane -- Photosynthesis -- Stable isotopes of carbon (?13C) and sulfur (?34S) -- Sulfate reduction -- Chlorobi -- Chromatiaceae -- Lamprocystis purpurea -- Pelodictyon luteolum -- Photobacteria
Аннотация: Microbiological and isotopic-geochemical investigations of the brackish meromictic lakes Shira and Shunet were performed in the steppe region of Khakasia in winter. Measurements made with a submersed sensor demonstrated that one-meter ice transmits light in a quantity sufficient for oxygenic and anoxygenic photosynthesis. As in the summer season, in the community of phototrophic bacteria found in Lake Shira, the purple sulfur bacteria Amoebobacter purpureus dominated, whereas, in Lake Shunet, the green sulfur bacteria Pelodictyon luteolum were predominant. Photosynthetic production, measured using the radioisotopic method, was several times lower than that in summer. The rates of sulfate reduction and production and oxidation of methane in the water column and bottom sediments were also lower than those recorded in summer. The process of anaerobic methane oxidation in the sediments was an exception, being more intense in winter than in summer. The data from radioisotopic measurements of the rates of microbial processes correlate well with the results of determination of the isotopic composition of organic and mineral carbon (?13C) and hydrogen sulfide and sulfate (?34S) and suggest considerable seasonal variations in the activity of the microbial community in the water bodies investigated. В© 2005 Pleiades Publishing, Inc.

Scopus
Держатели документа:
Winogradsky Institute of Microbiology, Russian Academy of Sciences, pr. 60-letiya Oktyabrya, Moscow, 117312, Russian Federation
Institute of Biophysics, Siberian Division, Russian Academy of Sciences, Krasnoyarsk 36, 660036, Russian Federation : 660036, Красноярск, Академгородок, д. 50, стр. 50

Доп.точки доступа:
Savvichev, A.S.; Rusanov, I.I.; Rogozin, D.Yu.; Zakharova, E.E.; Lunina, O.N.; Bryantseva, I.A.; Yusupov, S.K.; Pimenov, N.V.; Degermendzhi, A.G.; Ivanov, M.V.

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Vertical stratification of physical, chemical and biological components in two saline lakes Shira and Shunet (South Siberia, Russia) / A. G. Degermendzhy [et al.] // Aquatic Ecology. - 2010. - Vol. 44, Is. 3. - P619-632, DOI 10.1007/s10452-010-9336-6 . - ISSN 1386-2588
Кл.слова (ненормированные):
Ciliates -- Cryptomonas -- Fishless lakes -- Gammarus -- Mathematical modelling -- Meromictic lakes -- Phytoplankton -- Stratification -- Sulphur bacteria -- amphipod -- bacterium -- biomass -- ciliate -- ecosystem modeling -- flagellate -- meromictic lake -- microbial community -- numerical model -- physicochemical property -- phytoplankton -- population density -- saline lake -- salinity -- stratification -- thermocline -- trophic interaction -- vertical profile -- zooplankton -- Khakassia -- Lake Shira -- Lake Shunet -- Russian Federation -- Siberia -- Amphipoda -- Bacteria (microorganisms) -- Ciliophora -- Copepoda -- Cryptomonas -- Cryptomonas sp. -- Gammaridae -- Gammarus -- Gammarus lacustris -- Phytomastigophorea -- Protista -- Rotifera
Аннотация: A feature of meromictic lakes is that several physicochemical and biological gradients affect the vertical distribution of different organisms. The vertical stratification of physical, chemical and biological components in saline, fishless meromictic lakes Shira and Shunet (Siberia, Russia) is quite different mainly because both mean depth and maximum depth of lakes differ as well as their salinity levels differ. The chemocline of the Lake Shira, as in many meromictic lakes, is inhabited by bacterial community consisting of purple sulphur and heterotrophic bacteria. As the depth of the chemocline is variable, the bacterial community does not attain high densities. The mixolimnion in Lake Shira, which is thermally stratified in summer, also creates different habitat for various species. The distribution of phytoplankton is non-uniform with its biomass peak in the metalimnion. The distribution of zooplankton is also heterogeneous with rotifers and juvenile copepods inhabiting the warmer epilimnion and older copepods found in the cold but oxic hypolimnion. The amphipod Gammarus lacustris which can be assigned to the higher trophic link in the fishless lake's ecosystem, such as Lake Shira, is also distributed non-uniformly, with its peak density generally observed in the thermocline region. The chemocline in Lake Shunet is located at the depth of 5 m, and unlike in Lake Shira, due to a sharp salinity gradient between the mixolimnion and monimolimnion, this depth is very stable. The mixolimnion in Lake Shunet is relatively shallow and the chemocline is inhabited by (1) an extremely dense bacterial community; (2) a population of Cryptomonas sp.; and (3) ciliate community comprising several species. As the mixolimnion of Lake Shunet is not thermally stratified for long period, the phytoplankton and zooplankton populations are not vertically stratified. The gammarids, however, tend to concentrate in a narrow layer located 1-2 m above the chemocline. We believe that in addition to vertical inhomogeneities of both physicochemical parameters, biological and physical factors also play a role in maintaining these inhomogeneities. We conclude that the stratified distributions of the major food web components will have several implications for ecosystem structure and dynamics. Trophic interactions as well as mass and energy flows can be significantly impacted by such heterogeneous distributions. Species spatially separated even by relatively short distances, say a few centimetres will not directly compete. Importantly, we demonstrate that not only bacteria, phytoflagellates and ciliate tend to concentrate in thin layers but also larger-sized species such Gammarus (amphipods) can also under certain environmental conditions have stratified distribution with maxima in relatively thin layer. As the vertical structure of the lake ecosystem is rather complex in such stratified lakes as ours, the strategy of research, including sampling techniques, should consider potentially variable and non-homogeneous distributions. В© 2010 The Author(s).

Scopus
Держатели документа:
Institute of Biophysics SB RAS, 660036 Krasnoyarsk, Akademgorodok, Russian Federation
Siberian Federal University, Svobodnyi 79, 660041 Krasnoyarsk, Russian Federation
Netherlands Environmental Assessment Agency (PBL), P.O. Box 303, 3720 AH Bilthoven, Netherlands
Department of Aquatic Ecology, Netherlands Institute of Ecology (NIOO-KNAW), 3631 AC Nieuwersluis, Netherlands : 660036, Красноярск, Академгородок, д. 50, стр. 50

Доп.точки доступа:
Degermendzhy, A.G.; Zadereev, E.S.; Rogozin, D.Y.; Prokopkin, I.G.; Barkhatov, Y.V.; Tolomeev, A.P.; Khromechek, E.B.; Janse, J.H.; Mooij, W.M.; Gulati, R.D.

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A one-dimensional model of vertical stratification of Lake Shira focussed on winter conditions and ice cover / S. N. Genova [et al.] // Aquatic Ecology. - 2010. - Vol. 44, Is. 3. - P571-584, DOI 10.1007/s10452-010-9327-7 . - ISSN 1386-2588
Кл.слова (ненормированные):
Convective mixed layer -- Ice formation -- Ice melting -- Simplified model -- Winter profiles -- anoxic conditions -- hydrogen sulfide -- ice cover -- inhomogeneity -- meromictic lake -- numerical model -- one-dimensional modeling -- pycnocline -- salinity -- seasonality -- stratification -- vertical profile -- water column -- water temperature -- Khakassia -- Lake Shira -- Russian Federation
Аннотация: In meromictic lakes such as Lake Shira, horizontal inhomogeneity is small in comparison with vertical gradients. To determine the vertical distribution of temperature, salinity, and density of water in a deep zone of a Lake Shira, or other saline lakes, a one-dimensional (in vertical direction) mathematical model is presented. A special feature of this model is that it takes into account the process of ice formation. The model of ice formation is based on the one-phase Stefan problem with the linear temperature distribution in the solid phase. A convective mixed layer is formed under an ice cover due to salt extraction in the ice formation process. To obtain analytical solutions for the vertical distribution of temperature, salinity, and density of water, we use a scheme of vertical structure in the form of several layers. In spring, the ice melts as top and bottom. These processes are taken into account in the model. The calculated profiles of salinity and temperature of Shira Lake are in good agreement with field measurement data for each season. Additionally, we focussed on the redox zone, which is the zone in which the aerobic layers of a water column meet the anaerobic ones. Hyperactivity of plankton communities is observed in this zone in lakes with hydrogen sulphide monimolimnion, and Lake Shira is among them. The location of the redox zone in the lake, which is estimated from field measurements, coincides with a sharp increase in density (the pycnocline) during autumn and winter. During spring and summer, the redox zone is deeper than the pycnocline. The location of pycnocline calculated with the hydro physical model is in good agreement with field measurement data. В© 2010 Springer Science+Business Media B.V.

Scopus
Держатели документа:
Institute of Computational Modeling SB RAS, Akademgorodok 50/44, Krasnoyarsk 660036, Russian Federation
Krasnoyarsk, Siberian Federal University, Institute of Mathematics, Svobodny 79, Krasnoyarsk 660041, Russian Federation
Institute of Biophysics SB RAS, Akademgorodok, Krasnoyarsk 660036, Russian Federation
Federal University, Institute of Mathematics, Svobodny 79, Krasnoyarsk 660041, Russian Federation
Netherlands Institute of Ecology, Center for Limnology, Rijksstraatweg 6, Nieuwersluis 3631 AC, Netherlands : 660036, Красноярск, Академгородок, д. 50, стр. 50

Доп.точки доступа:
Genova, S.N.; Belolipetskii, V.M.; Rogozin, D.Y.; Degermendzhy, A.G.; Mooij, W.M.

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A general one-dimensional vertical ecosystem model of Lake Shira (Russia, Khakasia): Description, parametrization and analysis / I. G. Prokopkin [et al.] // Aquatic Ecology. - 2010. - Vol. 44, Is. 3. - P585-618, DOI 10.1007/s10452-010-9326-8 . - ISSN 1386-2588
Кл.слова (ненормированные):
Meromictic brackish lake -- One-dimensional vertical ecological model -- Sensitivity analysis -- alga -- biomass -- brackish water -- diffusion -- ecosystem modeling -- meromictic lake -- microbial community -- model test -- nutrient -- one-dimensional modeling -- parameterization -- phytoplankton -- seasonality -- sensitivity analysis -- solar radiation -- vertical profile -- water chemistry -- water temperature -- zooplankton -- Khakassia -- Lake Shira -- Russian Federation -- algae
Аннотация: A one-dimensional ecological model of the meromictic brackish Lake Shira (Russia, Khakasia) was developed. The model incorporates state-of-the-art knowledge about the functioning of the lake ecosystem using the most recent field observations and ideas from PCLake, a general ecosystem model of shallow freshwater lakes. The model of Lake Shira presented here takes into account the vertical dynamics of biomasses of the main species of algae, zooplankton and microbial community, as well as the dynamics of oxygen, detritus, nutrients and hydrogen sulphide from spring to autumn. Solar radiation, temperature and diffusion are modelled using real meteorological data. The parameters of the model were calibrated to the field data, after applying different methods of sensitivity analysis to the model. The resulting patterns of phytoplankton and nutrients dynamics show a good qualitative and quantitative agreement with the field observations during the whole summer season. Results are less satisfactory with respect to the vertical distribution of zooplankton biomass. We hypothesize that this is due to the fact that the current model does not take the sex and age structure of zooplankton into account. The dynamics of oxygen, hydrogen sulphide and the modelled positions of the chemocline and thermocline are again in good agreement with field data. This resemblance confirms the validity of the approach we took in the model regarding the main physical, chemical and ecological processes. This general model opens the way for checking various hypotheses on the functioning of the Lake Shira ecosystem in future investigations and for analysing options for management of this economically important lake. В© 2010 Springer Science+Business Media B.V.

Scopus
Держатели документа:
Institute of Biophysics, Akademgorodok, 660036 Krasnoyarsk, Russian Federation
Netherlands Institute of Ecology, Centre for Limnology, Rijksstraatweg 6, 3631 AC Nieuwersluis, Netherlands
Netherlands Environmental Assessment Agency (PBL), Postbus 303, 3720 AH Bilthoven, Netherlands : 660036, Красноярск, Академгородок, д. 50, стр. 50

Доп.точки доступа:
Prokopkin, I.G.; Mooij, W.M.; Janse, J.H.; Degermendzhy, A.G.

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Microbial community of the chemocline of the meromictic Lake Shunet (Khakassia, Russia) during summer stratification / D. Y. Rogozin [et al.] // Microbiology. - 2010. - Vol. 79, Is. 2. - P253-261, DOI 10.1134/S0026261710020189 . - ISSN 0026-2617
Кл.слова (ненормированные):
Chemocline -- Cyanobacteria -- Green sulfur bacteria -- Meromictic lakes -- Microstratification -- PCR-DGGE -- Phytoflagellates -- Purple sulfur bacteria -- Bacteria (microorganisms) -- Chlorobi -- Chromatiaceae -- Cryptomonas -- Cyanobacteria -- Lamprocystis purpurea -- Phytomastigophorea -- Proteobacteria -- Synechococcus
Аннотация: The spatio-temporal organization of the bacterial community inhabiting the chemocline of the stratified meromictic Lake Shunet (Khakassia, Russia) was investigated from May to September 2005 by means of microscopy, analysis of photosynthetic pigments, and PCR-DGGE with subsequent 16S rDNA analysis. The samples were collected with a multisyringe stratification sampler, sampling being performed every 5 cm. It was demonstrated that, during the period of investigation, there were no large changes in the bacterial community of the chlemocline, at least among the detected forms. During the whole period of study, purple sulfur bacteria related to Lamprocystis purpurea (Chromatiaceae) were predominant in the chemocline. Beneath the layer of purple bacteria, green sulfur bacteria were revealed that were phylogenetically distant from strain ShNPel02, which was previously isolated from this lake. Development of phytoflagellates of the genus Cryptomonas was observed in the upper zone of the chemocline. In the chemocline of Lake Shunet, the numbers of picoplankton cyanobacteria of the genus Synechococcus increased from May to September. It was demonstrated that the application of universal bacterial primers for DGGE resulted in the same qualitative distributional pattern of predominant species as microscopic studies. В© Pleiades Publishing, Ltd., 2010.

Scopus
Держатели документа:
Institute of Biophysics, Siberian Branch, Russian Academy of Sciences, Akademgorodok, Krasnoyarsk 660036, Russian Federation
Siberian Federal University, pr. Svobodnyi, 79, Krasnoyarsk 660041, Russian Federation : 660036, Красноярск, Академгородок, д. 50, стр. 50

Доп.точки доступа:
Rogozin, D.Y.; Trusova, M.Y.; Khromechek, E.B.; Degermendzhy, A.G.

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Effect of winter conditions on distributions of anoxic phototrophic bacteria in two meromictic lakes in Siberia, Russia / D. Y. Rogozin [et al.] // Aquatic Ecology. - 2009. - Vol. 43, Is. 3. - P661-672, DOI 10.1007/s10452-009-9270-7 . - ISSN 1386-2588
Кл.слова (ненормированные):
Chemocline -- Green sulphur bacteria -- Purple sulphur bacteria -- Snow -- Winter -- anoxic conditions -- bacterium -- biomass -- ice cover -- light intensity -- meromictic lake -- photoautotrophy -- remote sensing -- vertical distribution -- Eurasia -- Khakassia -- Lake Shira -- Lake Shunet -- Russian Federation -- Siberia -- Bacteria (microorganisms) -- Photobacteria
Аннотация: The year-to-year variations of vertical distribution and biomass of anoxic phototrophic bacteria were studied during ice periods 2003-2005 and 2007-2008 in meromictic lakes Shira and Shunet (Southern Siberia, Russian Federation). The bacterial layers in chemocline of both lakes were sampled with a thin-layer hydraulic multi-syringe sampler. In winter, biomass of purple sulphur bacteria varied considerably depending on the amount of light penetrating into the chemocline through the ice and snow cover. In relatively weakly stratified, brackish Shira Lake, the depth of chemocline varied between winters, so that light intensity for purple sulphur bacteria inhabiting this zone differed. In Shira Lake, increased transparency of mixolimnion in winter, high chemocline position and absence of snow resulted in light intensity and biomass of purple sulphur bacteria exceeding the summer values in the chemocline of the lake. We could monitor snow cover at the lake surface using remote sensing and therefore estimate dynamics and amount of light under ice and its availability for phototrophic organisms. In Shunet Lake, the light intensities in the chemocline and biomasses of purple sulphur bacteria were always lower in winter than in summer, but the biomasses of green sulphur bacteria were similar. В© Springer Science+Business Media B.V. 2009.

Scopus
Держатели документа:
Institute of Biophysics of Siberian Branch of Russian Academy of Sciences, Akademgorodok 50-50, 660036 Krasnoyarsk, Russian Federation
Siberian Federal University, Svobodny 79, 660071 Krasnoyarsk, Russian Federation
Center for Limnology, The Netherlands Institute of Ecology, Nieuwersluis, Netherlands : 660036, Красноярск, Академгородок, д. 50, стр. 50

Доп.точки доступа:
Rogozin, D.Y.; Zykov, V.V.; Chernetsky, M.Y.; Degermendzhy, A.G.; Gulati, R.D.

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Understanding the mechanisms of blooming of phytoplankton in Lake Shira, a saline lake in Siberia (the Republic of Khakasia) / A. G. Degermendzhy, R. D. Gulati // Aquatic Ecology. - 2002. - Vol. 36, Is. 2. - P331-340 . - ISSN 1386-2588
Кл.слова (ненормированные):
Carbon budget -- Cyanobacteria -- Heterotrophic bacteria -- Hydrogen sulphide -- Mathematical models of stratification -- Meromictic lakes -- Microbial loop -- Stratification -- Trophic scheme -- algal bloom -- ecosystem modeling -- limiting factor -- nutrient availability -- phytoplankton -- saline lake -- trophic interaction -- Russian Federation -- algae -- Bacteria (microorganisms) -- Cyanobacteria -- Lyngbya -- Lyngbya contorta
Аннотация: The paper summarises the results of a three-year research study (European Union Grant: INTAS 97-0519) aimed at investigating the planktonic populations and trophic organization of the Lake Shira ecosystem - a saline lake in Khakasia, Siberia. The lake exhibits a stable summer-autumn stratification of the chemical-biological components. The mechanisms responsible for the 'blooming' of phytoplankton in the deeper layers were investigated in greater detail, using data from both field and laboratory experiments. The spectra of nutrition were examined to estimate the relationships between the specific growth rates of the hydrobionts and the influence of the limiting factors: light, nutrients. The observed heterotrophic capability of a metalimnetic phytoplankton population might help explain the development in the deeper waters of Lyngbya contorta. The scheme of trophic interactions was put up, based on the assessment of the carbon pools and carbon flows in the pelagic zone of the lake. A mathematical model of the vertical structure of the lake's plankton populations was constructed, using the ecosystem description and data of vertical turbulent diffusion. The role of light and nutrient limitations and grazing mortality in forming the vertical inhomogeneities, particularly in lowering the depth of the maximal cyanobacterial biomass, has been demonstrated. The theoretical curves for the stratification of chemical and biological parameters have been brought in conformity with the field observations, e.g. for the different patterns of the peaks, and for the biomass maxima of cyanobacteria, purple and green sulphur bacteria, oxygen, and hydrogen sulphide. The calculations revealed that for an adequate assessment of the parameters for the hydrogen sulphide zone it is necessary to introduce flows of allochthonous organic matter. Based on the form of the sulphur distribution curve, the allochthonous input of organic matter and the inflow of hydrogen sulphide from the bottom have been theoretically discriminated for the first time. It has also been ascertained that irrespective of the depth the allochthonous substances limiting bacterial growth, the bacteria are uniformly distributed over depth and can serve as an indicator of the presence of limitation (the effect of autostabilisation in space). Of indisputable interest to limnology are the specific methods developed for understanding the functioning of Lake Shira ecosystem. These include the autostabilisation of the limiting factors, the on-the-spot fluorescent method of determining the three classes of microalgae, the algal mixotrophy and the planktonic population interactions and feedbacks, and development of a more sensitive, bioluminescent method for mapping the nonhomogeneities. Owing to a balanced combination of classical approaches (field observations, in situ data on production-decomposition) and the more recent ones (satellite monitoring, biophysical methods of estimating interactions of populations, mathematical models based on the field and experimental data), many of the structural-function relationships in the ecosystem can now be explained, and the models can provide 'mutual control and mutual agreement' between the data collected using different approaches.

Scopus
Держатели документа:
Institute of Biophysics SB RAS, 660036 Krasnoyarsk, Russian Federation : 660036, Красноярск, Академгородок, д. 50, стр. 50

Доп.точки доступа:
Degermendzhy, A.G.; Gulati, R.D.

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Seasonal features of consumption of lysine by uncultivated bacterial plankton of Eutrophic water reservoir / M. Y. Trusova, O. V. Kolmakova, M. I. Gladyshev // Contemporary Problems of Ecology. - 2012. - Vol. 5, Is. 4. - P391-398, DOI 10.1134/S1995425512040154 . - ISSN 1995-4255
Кл.слова (ненормированные):
16S ribosomal RNA -- biogeochemical function -- denaturing gradient gel electrophoresis -- eutrophic water reservoir -- lysine -- microecosystem (MES) -- uncultivated bacterial plankton -- amino acid -- bacterioplankton -- bacterium -- biogeochemistry -- electrokinesis -- eutrophication -- laboratory method -- microbial community -- polymerase chain reaction -- reservoir -- seasonal variation -- specialization -- Bacteria (microorganisms)
Аннотация: Dynamics of bacterial plankton community of eutrophic water reservoir in laboratory microecosystems with amino acid lysine was studied using PCR-DGGE technique. The addition of lysine to the microecosystems resulted in changes in the composition of the bacterial plankton in summer; in particular, a number of Lys1 and Lys2 species (genotypes) that consume this amino acid grew fast in the bacterial community. The plank tonic bacterial communities did not respond to the addition of lysine in spring and late summer. The obtained data confirm the hypothesis for the narrow specialization of bacterial plankton species to the consumption of individual organic substances. В© 2012 Pleiades Publishing, Ltd.

Scopus
Держатели документа:
Institute of Biophysics of Siberian Branch of Russian Academy of Sciences, Akademgorodok 50-50, Krasnoyarsk 660036, Russian Federation
Siberian Federal University, Svobodnii prosp. 79, Krasnoyarsk 660041, Russian Federation : 660036, Красноярск, Академгородок, д. 50, стр. 50

Доп.точки доступа:
Trusova, M.Y.; Kolmakova, O.V.; Gladyshev, M.I.

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10.

Water moss as a food item of the zoobenthos in the Yenisei River / G. S. Kalachova [et al.] // Central European Journal of Biology. - 2011. - Vol. 6, Is. 2. - P236-245, DOI 10.2478/s11535-010-0115-0 . - ISSN 1895-104X
Кл.слова (ненормированные):
Acetylenic fatty acids -- Bryophytes -- Fontinalis -- Gammarids -- Stable isotope analysis -- Trichopterans -- Animalia -- Bryophyta -- bryophytes -- Chironomidae -- Ephemeroptera -- Eulimnogammarus viridis -- Fontinalis -- Fontinalis antipyretica -- Gammaridae -- Invertebrata -- Trichoptera
Аннотация: Bryophytes are abundant in streams and are a habitat for many invertebrates, but their contribution to the diet of fluvial zoobenthos is still debated. To estimate the amount of bryophyte-derived organic matter assimilated by benthic invertebrates, we used a combination of fatty acid and stable isotope analyses during a four-year monthly study of a littoral site in the Yenisei River (Siberia, Russia). Acetylenic acids, which are highly specific biomarkers of the water moss Fontinalis antipyretica, were found in lipids of all dominant benthic animals: gammarids, ephemeropterans, chironomids and trichopterans. The dominant zoobenthic species, Eulimnogammarus viridis, had maximum levels of the biomarkers in its biomass during winter, and minimum levels in summer. The zoobenthos in the studied site regularly consume and assimilate bryophyte-derived organic matter as a minor supplemental food. This consumption increases in winter, when the main food source of the zoobenthos, epilithic biofilms, are probably scarce. В© 2010 Versita Warsaw and Springer-Verlag Wien.

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Держатели документа:
Institute of Biophysics of Siberian Branch of the Russian Academy of Science, 660036 Krasnoyarsk, Russian Federation
Siberian Federal University, 660041 Krasnoyarsk, Russian Federation : 660036, Красноярск, Академгородок, д. 50, стр. 50

Доп.точки доступа:
Kalachova, G.S.; Gladyshev, M.I.; Sushchik, N.N.; Makhutova, O.N.

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11.

Seasonal distribution and fatty acid composition of littoral microalgae in the Yenisei River / N. N. Sushchik [et al.] // Journal of Applied Phycology. - 2010. - Vol. 22, Is. 1. - P11-24, DOI 10.1007/s10811-009-9418-9 . - ISSN 0921-8971
Кл.слова (ненормированные):
Fatty acids -- Riverine microalgae -- Taxa composition -- Temperature adaptations -- algae -- Bacillariophyta -- Chlorophyta -- Cyanobacteria
Аннотация: We studied fatty acid (FA) composition of littoral microalgae in the fast-flowing oligotrophic river, the Yenisei, Siberia, monthly for 3 years. Seasonal dynamics of species composition had similar patterns in all the studied years. In springs, a pronounced dominance of filamentous green algae occurred, in summer and autumn diatoms were abundant, and in late autumn and winter epilithic biofilms consisted primarily of cyanobacteria and detritus. In general, FA composition of the algal periphytic community was dominated by 16:0, 16:1?7, 20:5?3, 14:0, and 18:3?3 throughout the studied period. Several groups of FAs, which had peculiar seasonal dynamics, were differentiated by statistical analysis based on a method of correlation graphs. The seasonal changes in FA composition could be partly explained by the seasonal succession of species composition of the community. Besides, we found that populations of both diatom and green algae grown in summer at a higher water temperature were lower in polyunsaturated fatty acids than those in spring, at a lower temperature. Hence, we suppose that the regular seasonal dynamics of FA composition of the studied littoral microalgae was driven both by changes in species composition and by temperature adaptations of the algal populations. The highest content of essential polyunsaturated FAs, eicosapentaenoic and docosahexaenoic acids, in the spring "psychrophilic" populations of diatoms could make them of the higher nutritive value for zoobenthic primary consumers. В© Springer Science+Business Media B.V. 2009.

Scopus
Держатели документа:
Institute of Biophysics of Siberian Branch of Russian Academy of Sciences, Akademgorodok, Krasnoyarsk 660036, Russian Federation
Siberian Federal University, Svobodny av. 79, Krasnoyarsk 660041, Russian Federation : 660036, Красноярск, Академгородок, д. 50, стр. 50

Доп.точки доступа:
Sushchik, N.N.; Gladyshev, M.I.; Ivanova, E.A.; Kravchuk, E.S.

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12.

Seasonal variations of metal concentrations in periphyton and taxonomic composition of the algal community at a Yenisei River littoral site / O. V. Anishchenko [et al.] // Central European Journal of Biology. - 2010. - Vol. 5, Is. 1. - P125-134, DOI 10.2478/s11535-009-0060-y . - ISSN 1895-104X
Кл.слова (ненормированные):
Heavy metals -- Periphyton -- Seasonal dynamics -- algae -- Chlorophyta -- Cyanobacteria -- Ulothrix zonata
Аннотация: The concentrations of metals K, Na, Ca, Mg, Fe, Mn, Zn, Cu, Ni, Pb, Co and Cr, in the water and periphyton (epilithic algal communities) were studied at a site in the middle stream of the Yenisei River (Siberia, Russia) during three years using monthly sampling frequencies. Despite considerable seasonal variations in aquatic concentrations of some metals, there was no correlation between metal contents in the water and in periphyton. Seasonal concentration variations of some metals in periphyton were related to the species (taxonomic) composition of periphytic microalgae and cyanobacteria. Enhanced levels of Ni and Co in periphyton in late autumn, winter, and early spring were likely caused by the predominance of cyanobacteria in the periphytic community, and annual maximum levels of K in periphyton in late spring and early summer were attributed to the domination of Chlorophyta, primarily Ulothrix zonata. В© Versita Warsaw and Springer-Verlag Berlin Heidelberg.

Scopus
Держатели документа:
Institute of Biophysics, Siberian Branch of Russian Academy of Sciences, 660036 Krasnoyarsk, Russian Federation
Siberian Federal University, 660041 Krasnoyarsk, Russian Federation : 660036, Красноярск, Академгородок, д. 50, стр. 50

Доп.точки доступа:
Anishchenko, O.V.; Gladyshev, M.I.; Kravchuk, E.S.; Ivanova, E.A.; Gribovskaya, I.V.; Sushchik, N.N.

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13.

Seasonal dynamics of fatty acids in the lipids of water moss Fontinalis antipyretica from the Yenisei River / G. S. Kalacheva [et al.] // Russian Journal of Plant Physiology. - 2009. - Vol. 56, Is. 6. - P795-807, DOI 10.1134/S1021443709060090 . - ISSN 1021-4437
Кл.слова (ненормированные):
Acetylenic acids -- Fatty acids -- Fontinalis antipyretica -- Seasonal dynamics -- Bryophyta -- Fontinalis antipyretica
Аннотация: Identification of lipid fatty acids (FA) and studying of their seasonal dynamics in water moss Fontinalis antipyretica from the Yenisei River were carried out by means of gas chromatography-mass spectrometry. FA composition of water moss was notable for a relatively low level of saturated acids and predominance of polyunsaturated acids (PUFA) with double bonds (accounting for more than 30% of total FA) and polyunsaturated acids with double and triple bonds (acetylenic acids, accounting for more than 40% of total FA). Among PUFA, ?- and ?-linolenic (18:3?3 and 18:3?6), arachidonic (20:4?6), and eicosapentaenoic (20:5?3) acids prevailed. Relative content of PUFA from ?3-family was the greatest in spring, and the level of PUFA from ?6-group was essentially the same throughout all the seasons. In the biomass of water moss, we identified seven acetylenic acids; among them octadeca-9,12-dien-6-ynoic (6a,9,12-18:3), octadeca-9,12,15-trien-6-ynoic (6a,9,12,15-18:4), and eicosa-11,14-dien-8-ynoic (8a,11,14-20:3) acids were predominant. For the first time, in the lipids of water moss we identified an acetylenic eicosa-11,14,17-trien-8-ynoic acid (8a,11,14,15-20:4). Relative content of acetylenic acids in the total FA was great throughout the entire period of investigation with the peak accumulation in summer. Owing to a steadily high level in the biomass of water moss and the lack of other producers of these acids in the ecosystem, acetylenic FA are highly specific biochemical markers useful for the investigation of trophic interactions between higher aquatic plants and zoobenthos. В© Pleiades Publishing, Ltd., 2009.

Scopus
Держатели документа:
Institute of Biophysics, Siberian Division, Russian Academy of Sciences, Akademgorodok, Krasnoyarsk 660036, Russian Federation
Siberian Federal University, Krasnoyarsk, Russian Federation : 660036, Красноярск, Академгородок, д. 50, стр. 50

Доп.точки доступа:
Kalacheva, G.S.; Sushchik, N.N.; Gladyshev, M.I.; Makhutova, O.N.

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14.

Seasonal dynamics of long-chain polyunsaturated fatty acids in littoral benthos in the upper Yenisei river / N. N. Sushchik [et al.] // Aquatic Ecology. - 2007. - Vol. 41, Is. 2. - P349-365, DOI 10.1007/s10452-006-9065-z . - ISSN 1386-2588
Кл.слова (ненормированные):
Essential compounds -- Periphytonic microalgae -- Riverine food chain -- Zoobenthos -- amphipod -- annelid -- benthos -- biomass -- diatom -- dominance -- fatty acid -- food chain -- larva -- littoral environment -- seasonal variation -- Eurasia -- Krasnoyarsk [Russian Federation] -- Russian Federation -- Yenisei River -- Amphipoda -- Annelida -- Arthropoda -- Bacillariophyta -- Chironomidae -- Gammaridae -- Hexapoda -- Invertebrata -- Oligochaeta (Metazoa) -- Trichoptera
Аннотация: We studied composition and concentrations of fatty acids (FAs) in benthos from pebbly littoral region of the Yenisei River in a sampling site near Krasnoyarsk city (Siberia, Russia) for 1 year from March 2003 to February 2004. Special attention was paid to major long-chain polyunsaturated fatty acids (PUFAs) of the ?3 family: eicosapentaenoic acid (EPA, 20:5?3) and docosahexaenoic acids (DHA, 22:6?3). In phytobenthos, which was dominated by diatoms, the annual maxima of EPA and DHA pool occurred in spring and early summer. In zoobenthos, EPA and DHA pool peaked in autumn, due mainly to an increase of the biomass of dominant taxa (gammarids) and to a moderate increase of the PUFA content per body weight. Seasonal peaks of EPA in overwintering insect larvae (chironomids and caddisflies) generally coincided with those of biomass of these larvae, while there was no such trend for amphipods and oligochaetes. In spring and early summer, the main part of ?3 PUFA, 40-97% of total amount, in the littoral region was contained in biomass of producers, i.e., benthic microalgae, and in autumn it was transferred to primary consumers-benthic invertebrates, which contained ?76-93% of total ?3 PUFAs. В© 2006 Springer Science+Business Media, B.V.

Scopus
Держатели документа:
Institute of Biophysics, Siberian Branch, Russian Academy of Sciences, Akademgorodok, Krasnoyarsk 660036, Russian Federation
Krasnoyarsk State Agricultural University, Mira av., 88, Krasnoyarsk 660049, Russian Federation
Krasnoyarsk State University, Svobodny av., 79, Krasnoyarsk 660042, Russian Federation : 660036, Красноярск, Академгородок, д. 50, стр. 50

Доп.точки доступа:
Sushchik, N.N.; Gladyshev, M.I.; Kravchuk, E.S.; Ivanova, E.A.; Ageev, A.V.; Kalachova, G.S.

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15.

Seasonal dynamics of akinetes of Anabaena flos-aquae in bottom sediments and water column of small Siberian reservoir / E. S. Kravchuk, E. A. Ivanova, M. I. Gladyshev // Aquatic Ecology. - 2006. - Vol. 40, Is. 3. - P325-336, DOI 10.1007/s10452-006-9031-9 . - ISSN 1386-2588
Кл.слова (ненормированные):
Akinetes -- Cyanobacteria -- Cyanobacterial blooms -- Resting stages -- abundance -- alga -- intertidal environment -- open water -- population dynamics -- reservoir -- sediment -- water column -- Eurasia -- Siberia -- Anabaena -- Anabaena flos-aquae -- Cyanobacteria
Аннотация: Seasonal dynamics of Anabaena flos-aquae (Lyngb.) Breb., including vegetative cells, akinetes and akinete envelopes, in bottom sediments and water column at both littoral and deeper central stations of a small Siberian reservoir was studied. Two types of akinetes were observed: in the first half of summer Anabaena formed akinetes, which served for vegetative reproduction and germinated in water column soon after differentiation, while in the second half of summer the akinetes produced served as a resting stages, which were deposited to bottom sediments. Canonical correlation analyses revealed that decrease of water temperature was the main environmental factor that stimulated the akinete formation. In contrast to the general opinion, concentration of inorganic phosphorus slightly, but positively influenced the akinete formation. Thus, akinetes formed in response to the temperature decrease, needs a certain level of this nutrient. At littoral and open-water stations abundance and seasonal dynamics of akinetes in water column and their sinking pattern were very similar. However, seasonal dynamics of abundance of akinetes in sediments in these two reservoir locations differed: whereas the abundance of akinetes in open water increased permanently during the summer, that in the littoral decreased soon after their sedimentation. The cause for decrease in abundance of akinetes in bottom sediments in winter is unknown. В© Springer 2006.

Scopus
Держатели документа:
Institute of Biophysics, Siberian Branch, Russian Academy of Sciences, Akademgorodok, Krasnoyarsk, 660036, Russian Federation
Krasnoyarsk State Agricultural University, Mira av., 88, Krasnoyarsk, 660049, Russian Federation : 660036, Красноярск, Академгородок, д. 50, стр. 50

Доп.точки доступа:
Kravchuk, E.S.; Ivanova, E.A.; Gladyshev, M.I.

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16.

Modelling the effect of planktivorous fish removal in a reservoir on the biomass of cyanobacteria / I. G. Prokopkin, V. G. Gubanov, M. I. Gladyshev // Ecological Modelling. - 2006. - Vol. 190, Is. 3-4. - P419-431, DOI 10.1016/j.ecolmodel.2005.05.011 . - ISSN 0304-3800
Кл.слова (ненормированные):
Biomanipulation -- Cyanobacteria -- Ecological mathematical model -- Viable gut passage -- Bacteria -- Biodiversity -- Biomass -- Ecosystems -- Rivers -- Cyanobacteria -- Fishes -- Viable gut passage -- Ecology -- algal bloom -- community dynamics -- modeling -- planktivore -- removal experiment -- reservoir -- Bugach Reservoir -- Eastern Hemisphere -- Eurasia -- Krasnoyarsk [Russian Federation] -- Russian Federation -- World -- Anabaena -- Carassius auratus -- Carassius carassius -- Cyanobacteria -- Cyprinus carpio -- Daphnia -- Microcystis
Аннотация: In 2002, a "top-down" biomanipulation (reduction of biomass of planktivorous fish Carassius auratus) had been successfully carried out in a small reservoir of the river Bugach (Krasnoyarsk, Russia), after which the cyanobacterial blooming ceased. However, the reservoir ecosystem was absolutely free of Daphnia - the main link of trophic cascade. As supposed, the reduction of blooming was the result of suppression of a direct stimulation effect of planktivorous fish on cyanobacteria, revealed earlier in laboratory experiments. The question arose as to whether the effect of stimulation of cyanobacteria revealed in laboratory may lead to the changes in biomass of cyanobacteria in the reservoir, observed after the biomanipulation. To test this supposition, a mathematical model describing growth of cyanobacteria in the reservoir was developed. The modelling results and field data on biomass of cyanobacteria in summer closely coincided. Modelling calculations showed that direct influence of planktivorous fish could cause the second summer peak of water blooming by Microcystis. On the contrary, removal of crucian carp from the reservoir will not affect the level of water blooming caused by cyanobacteria Anabaena, as this species' growth is not stimulated by fish. В© 2005 Elsevier B.V. All rights reserved.

Scopus
Держатели документа:
Institute of Biophysics, Akademgorodok, 660036 Krasnoyarsk, Russian Federation : 660036, Красноярск, Академгородок, д. 50, стр. 50

Доп.точки доступа:
Prokopkin, I.G.; Gubanov, V.G.; Gladyshev, M.I.

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17.

Seasonal dynamics of standing stock of essential polyunsaturated fatty acids in biomass of phyto- and zoobenthos at a littoral station in Enisei river / M. I. Gladyshev [и др.] // Doklady Akademii Nauk. - 2005. - Vol. 403, Is. 2. - С. 277-278 . - ISSN 0869-5652
Кл.слова (ненормированные):
Composition -- Ecosystems -- Fatty acids -- Rivers -- Littoral ecosystems -- Phytobenthos -- Seasonal variations -- Zoobenthos -- Biomass
Аннотация: It is established for the first time that in the river littoral ecosystem standing stock of essential polyunsaturated fatty acids in spring and early summer is accumulated in phytobenthos biomass, whereas in the fall the main part of this stock is shifted to the zoobenthos biomass. In the latter proceeds the concentrating of standing stock of essential polyunsaturated fatty acids of ?3 family, i.e. eicosapentaenoic and docosahexaenoic acids.

Scopus
Держатели документа:
Inst. Biofiziki SO RAN, Krasnoyarsk, Russian Federation : 660036, Красноярск, Академгородок, д. 50, стр. 50

Доп.точки доступа:
Gladyshev, M.I.; Sushchik, N.N.; Kravchuk, E.S.; Ivanova, E.A.; Ageev, A.V.; Kalacheva, G.S.

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18.

Limnetic zooplankton passing through a high-head dam and their fate in a river with high current velocity (Case of the Krasnoyarsk hydroelectric power station on the Yenisey river) / O. P. Dubovskaya, M. I. Gladyshev, O. N. Makhutova // Zhurnal Obshchei Biologii. - 2004. - Vol. 65, Is. 1. - С. 92-93 . - ISSN 0044-4596
Кл.слова (ненормированные):
Copepoda -- Heterocope
Аннотация: The vertical distribution of net zooplankton in head-water of Krasnoyarsk hydroelectric power station and its horizontal distribution in the tail-water were studied during two years in winter and summer seasons. In order to distinguish living and dead individuals the special staining was used. It was revealed that on average 77% of living plankton pass through high-head dam with deep water scoop to the tailwater. While passing through dam aggregates some individuals of the reservoir plankton are traumatized and die, that results in some increase of portion of dead individuals in the tail water near dam (from 3 to 6%). Alive zooplankton passed through the dam aggregates is eliminated under the Upper Yenisey highly turbulent conditions. There is approximately 10% of it in 32 km from the dam if compare with biomass in 20-40 m layer of reservoir, the portion of dead increases to 11%. The biomass of zooplankton suspended in the water column of the tail-water sometimes increases (till > 1 g/m3) due to large Copepoda Heterocope borealis, which inhabits near-bottom and near-shore river zones and can be found in the central part of the river during reproductive period. Limnetic zooplankton from the reservoir cannot be considered as important food for planktivores in the tail-water.

Scopus
Держатели документа:
Institute of Biophysics, Siberian Branch of RAS, Akademgorodok, Krasnoyarsk, 660036, Russian Federation
Krasnoyarsk State University, Svobodny av., 79, Krasnoyarsk, 660041, Russian Federation : 660036, Красноярск, Академгородок, д. 50, стр. 50

Доп.точки доступа:
Dubovskaya, O.P.; Gladyshev, M.I.; Makhutova, O.N.

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19.

Limnetic zooplankton run-off a high-head dam and their fate in a river with high current velocity (case of the Krasnoiarsk hydroelectric power station on the Yenisei river / O. P. Dubovskaia, M. I. Gladyshev, O. N. Makhutova // Zhurnal obshchei biologii. - 2004. - Vol. 65, Is. 1. - С. 81-93 . - ISSN 0044-4596
Кл.слова (ненормированные):
fresh water -- animal -- article -- biomass -- electric power plant -- physiology -- Russian Federation -- season -- zooplankton -- Animals -- Biomass -- Fresh Water -- Power Plants -- Seasons -- Siberia -- Zooplankton
Аннотация: The vertical distribution of net zooplankton in head-water of Krasnoyarsk hydroelectric power station and its horizontal distribution in the tail-water were studied during two years in winter and summer seasons. In order to distinguish living and dead individuals the special staining was used. It was revealed that on average 77% of living plankton pass through high-head dam with deep water scoop to the tailwater. While passing through dam aggregates some individuals of the reservoir plankton are traumatized and die, that results in some increase of portion of dead individuals in the tail water near dam (from 3 to 6%). Alive zooplankton passed through the dam aggregates is eliminated under the Upper Yenisei highly turbulent conditions. There is approximately 10% of it in 32 km from the dam if compare with biomass in 20-40 m layer of reservoir, the portion of dead increases to 11%. The biomass of zooplankton suspended in the water column of the tail-water sometimes increases (till > 1 g/m3) due to large Copepoda Heteroscope borealis, which inhabits near-bottom and near-shore river zones and can be found in the central part of the river during reproductive period. Limnetic zooplankton from the reservoir cannot be considered as important food for planktivores in the tail-water.

Scopus
Держатели документа:
Institute of Biophysics, Siberian Branch of RAS Akademgorodok, Krasnoyarsk, 660036, Russia. : 660036, Красноярск, Академгородок, д. 50, стр. 50

Доп.точки доступа:
Dubovskaia, O.P.; Gladyshev, M.I.; Makhutova, O.N.

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20.

Phylogenetic diversity of winter bacterioplankton of eutrophic Siberian reservoirs as revealed by 16S rRNA gene sequences / M. Yu. Trusova, M. I. Gladyshev // Microbial Ecology. - 2002. - Vol. 44, Is. 3. - P252-259, DOI 10.1007/s00248-002-2020-1 . - ISSN 0095-3628
Кл.слова (ненормированные):
bacterioplankton -- community composition -- community dynamics -- genetic variation -- phylogenetics -- reservoir -- winter -- Russian Federation -- Actinobacteria -- Bacteria (microorganisms) -- Bacteroides -- Betaproteobacteria -- Cyanobacteria -- Cytophaga -- Flavobacterium -- Prokaryota -- Proteobacteria -- bacterial DNA -- fresh water -- RNA 16S -- animal -- article -- bacterium -- chemistry -- DNA sequence -- genetic variability -- genetics -- microbiology -- molecular genetics -- phylogeny -- plankton -- Russian Federation -- season -- Animals -- Bacteria -- DNA, Bacterial -- Fresh Water -- Molecular Sequence Data -- Phylogeny -- Plankton -- RNA, Ribosomal, 16S -- Seasons -- Sequence Analysis, DNA -- Siberia -- Variation (Genetics)
Аннотация: Using 16S rRNA gene sequence analyses we investigated the bacterial diversity of winter bacterioplankton of two eutrophic Siberian reservoirs. These reservoirs show similarity in phytoplankton community composition in spring and autumn but tend to differ in summer in exhibiting cyanobacterial bloom. Forty-eight unique partial 16S RNA gene sequences retrieved from two libraries were mostly affiliated with the class Actinobacteria, ? subdivision of the class Proteobacteria, and the phylum Cytophaga-Flavobacterium-Bacteroides. The clone library of the pond exhibiting summer cyanobacterial bloom showed more diversity in sequence composition. A significant number of bacterial 16S rRNA gene clones were closely related to freshwater bacteria previously found in different aquatic ecosystems. This finding confirms the assumption that some bacterial clades are globally distributed.

Scopus
Держатели документа:
Inst. of Biophys. of Siberian Branch, Russian Academy of Sciences, Krasnoyarsk, Russian Federation : 660036, Красноярск, Академгородок, д. 50, стр. 50

Доп.точки доступа:
Trusova, M.Yu.; Gladyshev, M.I.

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