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A quantum chemical study of the formation of 2-hydroperoxy-coelenterazine in the Сa2+-regulated photoprotein obelin / L. Y. Antipina [et al.] // J. Struct. Chem. - 2011. - Vol. 52, Is. 5. - P. 870-875. - Cited References: 19. - The work was supported by RFBR (07-04-00930-a), the "Molecular and Cell Biology" Program of the Presidium of the Russian Academy of Sciences, and the Program of the Siberian Division of the Russian Academy of Sciences (project No. 2) within the implementation of the Federal Targeted Program "Scientific and Scientific Pedagogical Personnel of Innovative Russia, 2010" (P333 and P213). . - ISSN 0022-4766

РУБ Chemistry, Inorganic & Nuclear + Chemistry, Physical
Рубрики:
CALCIUM-DISCHARGED OBELIN
   SEMIEMPIRICAL METHODS
   1.7 ANGSTROM
   OPTIMIZATION
   PARAMETERS
   MECHANISM
   FLUORESCENCE
   ELEMENTS
   PROTEIN
   EMITTER
Кл.слова (ненормированные):
coelenterazine -- 2-hydroperoxy-coelenterazine -- Obelia longissima -- Renilla muelleri
Аннотация: The Ca2+-regulated photoprotein obelin determines the luminescence of the marine hydroid Obelia longissima. Bioluminescence is initiated by calcium and appears as a result of the oxidative decarboxylation related to the coelenterazine substrate. The luciferase of the luminescent marine coral Renilla muelleri (RM) also uses coelenterazine as a substrate. However, three proteins are involved in the in vivo bioluminescence of these animals: luciferase, green fluorescent protein, and Ca2+-regulated coelenterazine-binding protein (CBP). In fact, CBP that contains one strongly bound coelenterazine molecule is the RM luciferase substrate in the in vivo bioluminescent reaction. Coelenterazine becomes available for oxygen and the reaction with luciferase only after binding CBP with calcium ions. Unlike Ca2+-regulated photoproteins, the coelenterazine molecule is not activated by oxygen in the CBP molecule. In this work, by means of quantum chemical methods the behavior of substrates in these proteins is analyzed. It is shown that coelenterazine can form different tautomers: CLZ(2H) and CLZ(7H). The formation of 2-hydroperoxy-coelenterazine is studied. According to the obtained data, these proteins use different forms of the substrates for the reaction. In obelin, the substrate is in the CLZ(2H) form that affords hydrogen peroxide. In RM, coelenterazine is in the CLZ(7H) form, and therefore, CBP is not activated by oxygen.

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Держатели документа:
Russian Acad Sci, LV Kirensky Phys Inst, Siberian Div, Krasnoyarsk, Russia
Russian Acad Sci, Inst Biophys, Siberian Div, Krasnoyarsk, Russia
MF Reshetnev Siberian State Aerosp Univ, Krasnoyarsk, Russia

Доп.точки доступа:
Antipina, L. Yu.; Tomilin, F. N.; Томилин, Феликс Николаевич; Vysotski, E. S.; Высоцкий, Евгений Степанович; Ovchinnikov, S. G.; Овчинников, Сергей Геннадьевич
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Laser photolysis of fluorone dyes in a chitosan matrix / E. A. Slyusareva [et al.] // Quantum Electron. - 2012. - Vol. 42, Is. 8. - P. 687-692, DOI 10.1070/QE2012v042n08ABEH014860. - Cited References: 32 . - ISSN 1063-7818

РУБ Engineering, Electrical & Electronic + Physics, Applied
Рубрики:
POLY(VINYL ALCOHOL) MATRIX
   XANTHENE DYES
   ROSE-BENGAL
   FLUORESCENCE PROPERTIES
   DELAYED FLUORESCENCE
   ORGANIC-MOLECULES
   TRIPLET-STATE
   EXCITATION
   ABSORPTION
   PHOSPHORESCENCE
Кл.слова (ненормированные):
laser photolysis -- fluorescein -- dibromofluorescein -- eosin Y -- erythrosin B -- Rose Bengal -- chitosan -- photobleaching kinetics -- two-step absorption
Аннотация: Kinetics of laser-induced photobleaching of fluorone dyes (fluorescein, dibromofluorescein, eosin Y, erythrosin B, Rose Bengal) is studied in a chitosan matrix. For all dyes the bleaching kinetics at the intensities of laser radiation 0.7 — 11.9 W cm-2 demonstrates quasi-monomolecular behaviour. The results are analysed using a kinetic model, based on the four-level (S0, S1, T1, Tn) scheme of the dye with chemically active triplet states taken into account. It is shown that the rate constants of the chemical reaction involving higher triplet states in the dyes studied amount to (3.9 — 18.6) × 106 s-1 and exceed the analogous values for the reaction involving the first lower triplet states by nine orders of magnitude. The rate of reaction involving the first triplet states appeared to be higher by one — two orders of magnitude than that in the case of higher triplet states involved because of low population of the latter. The possible mechanism of dye bleaching with participation of chitosan that consists in reduction of the dye to the leuco form by transfer of hydrogen from the chitosan matrix is discussed.

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Публикация на русском языке Лазерный фотолиз флуороновых красителей в хитозановой матрице [Текст] / Е. А. Слюсарева [и др.] // Квант. электроника : Физический институт им. П.Н.Лебедева РАН, 2012. - Т. 42 № 8. - С. 687-692

Держатели документа:
[Slyusareva, E. A.
Sizykh, A. G.
Gerasimova, M. A.
Slabko, V. V.] Siberian Fed Univ, Krasnoyarsk 660041, Russia
[Myslivets, S. A.] Russian Acad Sci, Siberian Branch, LV Kirensky Phys Inst, Krasnoyarsk 660036, Russia

Доп.точки доступа:
Slyusareva, E. A.; Sizykh, A. G.; Gerasimova, M. A.; Slabko, V. V.; Слабко, Виталий Васильевич; Myslivets, S. A.; Мысливец, Сергей Александрович
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The effect of halogen substitution on the structure and electronic spectra of fluorone dyes / E. A. Slyusareva [et al.] // Opt. Spectrosc. - 2012. - Vol. 112, Is. 5. - P. 671-678, DOI 10.1134/S0030400X12040194. - Cited References: 44. - This work was supported by the FTsP Kadry GK-P333 and by the Siberian Branch of the Russian Academy of Sciences (Integration project no. 2). We are grateful to the Joint Supercomputer Center of the Russian Academy of Sciences (Moscow) and to the Complex of High-Performance Computations of the IKIT of Siberian Federal University. E. A. Slyusareva acknowledges support from the German Academic Exchange Service and the Ministry of Education and Science of the Russian Federation (the program "Mikhail Lomonosov II") of scientific research at the University of Regensburg and in the Helmholtz Center in Berlin (Germany). . - ISSN 0030-400X

РУБ Optics + Spectroscopy
Рубрики:
POLARIZABLE CONTINUUM MODEL
   BORIC-ACID GLASS
   XANTHENE DYES
   FLUORESCEIN DERIVATIVES
   DELAYED FLUORESCENCE
   EOSIN-Y
   ABSORPTION
   PHOSPHORESCENCE
   TRANSITIONS
   EXCITATION
Аннотация: By means of the B3LYP density functional method with the use of the polarized continuum model PCM, we have performed quantum-chemical computations of the electronic absorption and fluorescence spectra of fluorone dianions: fluorescein, dibromofluorescein, eosin, erythrosine, and Rose Bengal in vacuum and methanol. We have revealed conformational features of the structure of fluorone dianions (charge redistribution, changes in the bond lengths and angles between bonds) second by the halogen substitution, the transition from the ground state to an excited state, and the change of the solvent (vacuum-methanol). Absorption and fluorescence wavelengths, constant dipole moments, transition dipole moments, and oscillator strengths have been calculated. We have showed that, upon halogenation of fluorones, the absorption spectra are redshifted and the Stokes shift decreases, which is qualitatively consistent with experimental results.

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Публикация на русском языке Влияние галогензамещения на структуру и электронные спектры флуороновых красителей [Текст] / Е. А. Слюсарева [и др.] // Оптика и спектроскопия : Наука, 2012. - Т. 112 № 5. - С. 729-737

Держатели документа:
[Slyusareva, E. A.
Tomilin, F. N.
Sizykh, A. G.
Tankevich, E. Yu.
Kuzubov, A. A.
Ovchinnikov, S. G.] Siberian Fed Univ, Krasnoyarsk 660041, Russia
[Tomilin, F. N.
Ovchinnikov, S. G.] Russian Acad Sci, Siberian Branch, Kirensky Inst Phys, Krasnoyarsk 660036, Russia

Доп.точки доступа:
Slyusareva, E. A.; Tomilin, F. N.; Томилин, Феликс Николаевич; Sizykh, A. G.; Tankevich, E. Y.; Kuzubov, A. A.; Кузубов, Александр Александрович; Ovchinnikov, S. G.; Овчинников, Сергей Геннадьевич
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    Insights into Ba4Si6O16 structure and photoluminescence tuning of Ba4Si6O16:Ce3+,Eu2+ phosphors / Chen M. [et al.] // J. Mater. Chem. C. - 2015. - Vol. 3, Is. 48. - P. 12477-12483, DOI 10.1039/c5tc03271g. - Cited References: 39. - This work was supported by the National Natural Science Foundations of China (Grant No. 51572023 and 51272242), Natural Science Foundations of Beijing (2132050), the Program for New Century Excellent Talents in University of Ministry of Education of China (NCET-12-0950), Beijing Nova Program (Z131103000413047), the Funds of the State Key Laboratory of New Ceramics and Fine Processing, Tsinghua University (KF201306), and Fundamental Research Funds for the Central Universities (FRF-TP-14-005A1). . - ISSN 2050-7534
   Перевод заглавия: Исследования структуры Ba4Si6O16 и люминесцентных свойств Ba4Si6O16:Ce3+,Eu2+

РУБ Materials Science, Multidisciplinary + Physics, Applied
Рубрики:
LIGHT-EMITTING-DIODES
   ENERGY-TRANSFER
   LUMINESCENCE PROPERTIES
   WHITE-LIGHT
   GLASS-CERAMICS
   BA PHOSPHORS
   EMISSION
   GREEN
   EU2+
   FLUORESCENCE
Аннотация: The versatile polymorphism and chemical compositions of barium silicates have been studied for a long time and their crystal structures have been established. Herein, we focused on the understanding of the crystal structure of the Ba4Si6O16 phase and the structural correlation of Ba4Si6O16 and Ba2Si3O8; moreover, the luminescence properties of Ce3+,Eu2+-co-activated Ba4Si6O16 phosphors have been discussed. Ba4Si6O16:Ce3+,Eu2+ phosphors show tunable blue-green emission upon excitation with 365 nm ultraviolet (UV) light. The blue emission originates from Ce3+, whereas the bluish-green emission is ascribed to Eu2+, and variation in the emission peak wavelength from 442 to 497 nm can be achieved by properly tuning the Ce3+/Eu2+ ratio. Energy transfer from Ce3+ to Eu2+ in the Ba4Si6O16 host has been validated by the variation of emission spectra as well as the variation of Ce3+ decay lifetimes with increasing Eu2+ concentration, and the energy transfer mechanism is demonstrated to be a resonant type via a dipole-dipole process. The results suggest that Ba4Si6O16:Ce3+,Eu2+ phosphors are potential candidates as a blue-green component for UV-excited white light-emitting diodes. © 2015 The Royal Society of Chemistry.

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Держатели документа:
Key Laboratory of New Energy Materials and Technologies, School of Materials Science and Engineering, University of Science and Technology Beijing, Beijing, China
Laboratory of Crystal Physics, Kirensky Institute of Physics, SB RAS, Krasnoyarsk, Russian Federation
Department of Physics, Far Eastern State Transport University, Khabarovsk, Russian Federation

Доп.точки доступа:
Chen M.; Xia Z.; Molokeev, M. S.; Молокеев, Максим Сергеевич; Liu Q.
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Magnetic circular dichroism analysis of crude oil / I. S. Edelman [et al.] // J. Struct. Chem. - 2016. - Vol. 57, Is. 2. - P. 382-389, DOI 10.1134/S0022476616020207. - Cited References:33. - The work was carried out with the partial support of the grant of the President of the Russian Federation (NSh-2886.2014.2), and in the frameworks of the base budget financing of Kirensky Institute of Physics and Boreskov Institute of Catalysis (Siberian Branch, Russian Academy of Sciences) (V.44.1.15.). . - ISSN 0022-4766. - ISSN 1573-8779

РУБ Chemistry, Inorganic & Nuclear + Chemistry, Physical
Рубрики:
Near-UV/visible spectroscopy
   Electron-spin-resonance
   Asphaltene dispersions
   Single-crystals
   Absorption
   VO2+
   EPR
   FLuorescence
   Aggregation
   Absorbency
Кл.слова (ненормированные):
magnetic circular dichroism (MCD) -- MCD spectroscopy -- absorption spectroscopy of oil
Аннотация: Optical and magneto-optical properties of solutions of crude oil of different origin (i.e., taken from different fields) are studied in the visible and near-UV region of optical emission. Magnetic circular dichroism (MCD) spectra of oil are obtained in the vicinity of wavelengths of ~410 nm, 533 nm, and 576 nm. It is demonstrated that the intensity of the MCD signal depends on the origin of crude oil, and it is proportional to the oil concentration in the solution. The comparison of the magneto-optical spectroscopy data with the chemical composition of samples allows us to conclude that the observed magneto-optical activity is determined by the presence of VO2+ complexes in the oil samples studied. The revealed magneto-optical activity of conventional oil can form a basis of a new method for the analysis of the composition and properties of oil of different origin.

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Публикация на русском языке Исследование природной нефти с помощью спектроскопии магнитного кругового дихроизма [Текст] / И. С. Эдельман [и др.] // Журн. структ. химии. - 2016. - Т. 57 № 2. - С. 394-401

Держатели документа:
Russian Acad Sci, Siberian Branch, Kirensky Inst Phys, Krasnoyarsk, Russia.
Siberian Fed Univ, Krasnoyarsk, Russia.
Russian Acad Sci, Siberian Branch, Boreskov Inst Catalysis, Novosibirsk, Russia.

Доп.точки доступа:
Edelman, I. S.; Эдельман, Ирина Самсоновна; Sokolov, A. E.; Соколов, Алексей Эдуардович; Zabluda, V. N.; Заблуда, Владимир Николаевич; Shubin, A. A.; Martyanov, O. N.; Russian Federation [NSh-2886.2014.2]; Kirensky Institute of Physics (Siberian Branch, Russian Academy of Sciences) [V.44.1.15]; Boreskov Institute of Catalysis (Siberian Branch, Russian Academy of Sciences) [V.44.1.15]
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Ultraviolet fluorescence of coelenteramide and coelenteramide-containing fluorescent proteins. Experimental and theoretical study / R. R. Alieva [et al.] // J. Photochem. Photobiol. B Biol. - 2016. - Vol. 162. - P. 318-323, DOI 10.1016/j.jphotobiol.2016.07.004. - Cited References: 49. - This work was supported by the state budget allocated to the fundamental research at the Russian Academy of Sciences (project No 01201351504); the Russian Foundation for Basic Research, Grant No 15-43-04377-sibir; and Russian president's grant NSh-7559.2016.2. . - ISSN 1011-1344

РУБ Biochemistry & Molecular Biology + Biophysics
Рубрики:
DENSITY-FUNCTIONAL THEORY
   ELECTRON-EXCITED-STATES
   PHOTOPROTEIN OBELIN
   DISCHARGED-OBELIN
   LIGHT-EMITTERS
   BIOLUMINESCENCE
   AEQUORIN
   LUMINESCENCE
   MECHANISM
   CHEMILUMINESCENCE
Кл.слова (ненормированные):
Coelenteramide -- Fluorescent protein -- Discharged photoproteins -- Obelin -- Aequorin -- Fluorescence -- Excitation energy -- Fluorescence -- B3LYP
Аннотация: Coelenteramide-containing fluorescent proteins are products of bioluminescent reactions of marine coelenterates. They are called ‘discharged photoproteins’. Their light-induced fluorescence spectra are variable, depending considerably on external conditions. Current work studies a dependence of light-induced fluorescence spectra of discharged photoproteins obelin, aequorin, and clytin on excitation energy. It was demonstrated that photoexcitation to the upper electron-excited states (260–300 nm) of the discharged photoproteins initiates a fluorescence peak in the near UV region, in addition to the blue-green emission. To characterize the UV fluorescence, the light-induced fluorescence spectra of coelenteramide (CLM), fluorophore of the discharged photoproteins, were studied in methanol solution. Similar to photoproteins, the CLM spectra depended on photoexcitation energy; the additional peak (330 nm) in the near UV region was observed in CLM fluorescence at higher excitation energy (260–300 nm). Quantum chemical calculations by time depending method with B3LYP/cc-pVDZ showed that the conjugated pyrazine-phenolic fragment and benzene moiety of CLM molecule are responsible for the additional UV fluorescence peak. Quantum yields of CLM fluorescence in methanol were 0.028 ± 0.005 at 270–340 nm photoexcitation. A conclusion was made that the UV emission of CLM might contribute to the UV fluorescence of the discharged photoproteins. The study develops knowledge on internal energy transfer in biological structures – complexes of proteins with low-weight aromatic molecules. © 2016 Elsevier B.V.

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Держатели документа:
Institute of Biophysics SB RAS, Akademgorodok 50/50, Krasnoyarsk, Russian Federation
Institute of Physics SB RAS, Akademgorodok 50/38, Krasnoyarsk, Russian Federation
Siberian Federal University, Svobodny Prospect 79, Krasnoyarsk, Russian Federation

Доп.точки доступа:
Alieva, R. R.; Tomilin, F. N.; Томилин, Феликс Николаевич; Kuzubov, A. A.; Кузубов, Александр Александрович; Ovchinnikov, S. G.; Овчинников, Сергей Геннадьевич; Kudryasheva, N. S.
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Polarized absorption spectra and spectroscopic parameters of Tm3+ in the TmAl3(BO3)(4) single crystal / A. V. Malakhovskii [et al.] // Phys. Solid State. - 2008. - Vol. 50, Is. 7. - P. 1287-1293, DOI 10.1134/S1063783408070159. - Cited References: 36 . - ISSN 1063-7834

РУБ Physics, Condensed Matter
Рубрики:
RARE-EARTH IONS
   ELECTRONIC ENERGY LEVELS
   DIODE-PUMPED LASER
   OPTICAL-ABSORPTION
   ALUMINUM GARNET
   MU-M
   INTENSITIES
   FLUORESCENCE
   GLASSES
   OXIDE
Аннотация: High-optical-quality single crystals of the TmAl3(BO3)(4) compound were synthesized from a solution in the melt. The absorption spectra in the sigma and pi polarizations for the H-3(6) - F-3(4), H-3(6) - H-3(5), H-3(6) - H-3(4), H-3(6) - F-3(3), H-3(6) - F-3(2), H-3(6) - (1)G(4), and H-3(6) - D-1(2) transitions in the Tm3+ ion were recorded at room temperature. The transition intensities were analyzed in the framework of the Judd-Ofelt theory generalized to the case of anisotropic crystals, and the following parameters of the theory were obtained: Omega(2) = 6.14 x 10(-20) cm(2), Omega(4) = 3.09 x 10(-20) cm(2), and Omega(6) = 2.04 x 10(-20) cm(2). The lifetimes and the branching ratios were determined for all possible transitions.

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Держатели документа:
[Malakhovskii, A. V.
Sokolov, A. E.
Temerov, V. L.
Bezmaternykh, L. N.
Sukhachev, A. L.
Seredkin, V. A.] Russian Acad Sci, Siberian Branch, LV Kirensky Phys Inst, Krasnoyarsk 660036, Russia
[Gnatchenko, S. L.
Kachur, I. S.
Piryatinskaya, V. G.] Natl Acad Sci Ukraine, Verkin Inst Low Temp Phys & Engn, UA-61103 Kharkov, Ukraine
ИФ СО РАН
Kirensky Institute of Physics, Siberian Branch, Russian Academy of Sciences, Akademgorodok, Krasnoyarsk 660036, Russian Federation
Verkin Institute for Low Temperature Physics and Engineering, National Academy of Sciences of Ukraine, pr. Lenina 47, Kharkov 61103, Ukraine

Доп.точки доступа:
Malakhovskii, A. V.; Малаховский, Александр Валентинович; Sokolov, A. E.; Соколов, Алексей Эдуардович; Temerov, V. L.; Темеров, Владислав Леонидович; Bezmaternykh, L. N.; Безматерных, Леонард Николаевич; Sukhachev, A. L.; Сухачев, Александр Леонидович; Seredkin, V. A.; Середкин, Виталий Александрович; Gnatchenko, S. L.; Kachur, I. S.; Piryatinskaya, V. G.
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AVERYANOV, E. M.
STATIONARY SPECTRUM OF ADMIXED LIQUID-CRYSTAL POLARIZED FLUORESCENCE / E. M. AVERYANOV // Zhurnal Eksperimentalnoi Teor. Fiz. - 1994. - Vol. 106, Is. 3. - P. 767-779. - Cited References: 29 . - ISSN 0044-4510

РУБ Physics, Multidisciplinary
Рубрики:
LOCAL FIELD
   SPECTROSCOPY
   PARAMETERS
   DYES

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Averyanov, E. M.
Splitting of polarized impurity fluorescence bands in the steady-state spectrum of an isotropic solution / E. M. Averyanov // JETP Letters. - 1994. - Vol. 59, Is. 1. - P. 23-26. - Cited References: 12 . - ISSN 0021-3640

РУБ Physics, Multidisciplinary
Рубрики:
RELAXATION
Аннотация: A difference is predicted between the peaks, nu(VV) and nu(VH), Of the polarized components J(VV)(nu) and J(VH)(nu) in the steady-state spectrum of impurity fluorescence in an isotropic solution. This difference would result from a temporal correlation between an orientational Brownian diffusion of excited fluorescing molecules and a structural relaxation of the surrounding matrix molecules.

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Аверьянов, Евгений МихайловичAver'yanov
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10.

AVERYANOV, E. M.
POLARIZED LUMINESCENCE SPECTRUM OF IMPURITY LIQUID-CRYSTAL - THE DEGENERATION LIFTED AND RENEWED BY RELAXATION / E. M. AVERYANOV // Zhurnal Eksperimentalnoi Teor. Fiz. - 1993. - Vol. 103, Is. 6. - P. 2018-2038. - Cited References: 45 . - ISSN 0044-4510

РУБ Physics, Multidisciplinary
Рубрики:
RESOLVED FLUORESCENCE DEPOLARIZATION
   UNIAXIAL MOLECULAR SAMPLES
   NEMATIC ORDER PARAMETERS
   EXCITED-STATES
   SPECTROSCOPY
   MEMBRANES
   FLUOROPHORES
   ORIENTATION
   TRANSITION
   DYES
Аннотация: The general molecular-statistical approach is proposed for the analysis or the polarized luminescence spectrum for impurity molecule of an arbitrary symmetry in the nematic liquid crystal matrix. On the particular example of uniaxial molecules the influence of features of the molecular electron structure, orientational statistics, molecular dynamics, and features of the anisotropic intermolecular coupling upon the positions of maxima v(if)(t) of impurity fluorescence polarized bands J(ij)(t) is studied. For the first time it is shown that all these factors significantly affect the degree of spectrum v(ij)(t) degeneration. For t not-equal 0, relaxation of excited impurity molecule subsystem toward the orientational distribution lifts a partial degeneration of spectrum v(ij), occuring at t not-equal 0, and renews partial or total degeneration of spectrum v(ij) in the limit t = infinity. In the lack of the spectrum v(ij) degeneration for t = 0 the relaxation may restore partial degeneration for t not-equal 0 as a function of the features of electron structure of molecules. The results of work explain the familiar experimental data on the number of independent component v(ij) and relation between them, on dependence of v(ij) upon the order of matrix and impurity subsystem, on the mutual relation in the positions of impurity band polarized component in the absorption and fluorescence spectra.

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