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Quantum chemical study of 2-hydroperoxycoelenterazine generation / F. N. Tomilin [et al.] // Luminescence. - 2012. - Vol. 27, Is. 2. - P. 165-166, DOI 10.1002/bio.2341. - Cited References: 2. - The work was supported by the Program of the Government of Russian Federation “Measures to attract leading scientists to Russian educational institutions” (grant No 11. G34.31.058), FCP GK-P333 and grant of SBRAS. We are grateful for the use of computation facilities of Joint Supercomputer Center of the Russian Academy of Sciences MVS-100K (Moscow) and Center of high-efficiency calculations of IKIT SFU (Krasnoyarsk). . - ISSN 1522-7235

РУБ Biochemistry & Molecular Biology

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Доп.точки доступа:
Tomilin, F. N.; Томилин, Феликс Николаевич; Tikhonova, L. V.; Eremeeva, E. V.; Еремеева, Елена Владимировна; Ovchinnikov, S. G.; Овчинников, Сергей Геннадьевич; Vysotski, E. S.; Высоцкий, Евгений Степанович; International Symposium on Bioluminescence and Chemiluminescence (17th ; 28 May – 2 June 2012 ; Guelph, Ontario, Canada)
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Ultraviolet fluorescence of coelenteramide and coelenteramide-containing fluorescent proteins. Experimental and theoretical study / R. R. Alieva [et al.] // J. Photochem. Photobiol. B Biol. - 2016. - Vol. 162. - P. 318-323, DOI 10.1016/j.jphotobiol.2016.07.004. - Cited References: 49. - This work was supported by the state budget allocated to the fundamental research at the Russian Academy of Sciences (project No 01201351504); the Russian Foundation for Basic Research, Grant No 15-43-04377-sibir; and Russian president's grant NSh-7559.2016.2. . - ISSN 1011-1344

РУБ Biochemistry & Molecular Biology + Biophysics
Рубрики:
DENSITY-FUNCTIONAL THEORY
   ELECTRON-EXCITED-STATES
   PHOTOPROTEIN OBELIN
   DISCHARGED-OBELIN
   LIGHT-EMITTERS
   BIOLUMINESCENCE
   AEQUORIN
   LUMINESCENCE
   MECHANISM
   CHEMILUMINESCENCE
Кл.слова (ненормированные):
Coelenteramide -- Fluorescent protein -- Discharged photoproteins -- Obelin -- Aequorin -- Fluorescence -- Excitation energy -- Fluorescence -- B3LYP
Аннотация: Coelenteramide-containing fluorescent proteins are products of bioluminescent reactions of marine coelenterates. They are called ‘discharged photoproteins’. Their light-induced fluorescence spectra are variable, depending considerably on external conditions. Current work studies a dependence of light-induced fluorescence spectra of discharged photoproteins obelin, aequorin, and clytin on excitation energy. It was demonstrated that photoexcitation to the upper electron-excited states (260–300 nm) of the discharged photoproteins initiates a fluorescence peak in the near UV region, in addition to the blue-green emission. To characterize the UV fluorescence, the light-induced fluorescence spectra of coelenteramide (CLM), fluorophore of the discharged photoproteins, were studied in methanol solution. Similar to photoproteins, the CLM spectra depended on photoexcitation energy; the additional peak (330 nm) in the near UV region was observed in CLM fluorescence at higher excitation energy (260–300 nm). Quantum chemical calculations by time depending method with B3LYP/cc-pVDZ showed that the conjugated pyrazine-phenolic fragment and benzene moiety of CLM molecule are responsible for the additional UV fluorescence peak. Quantum yields of CLM fluorescence in methanol were 0.028 ± 0.005 at 270–340 nm photoexcitation. A conclusion was made that the UV emission of CLM might contribute to the UV fluorescence of the discharged photoproteins. The study develops knowledge on internal energy transfer in biological structures – complexes of proteins with low-weight aromatic molecules. © 2016 Elsevier B.V.

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Держатели документа:
Institute of Biophysics SB RAS, Akademgorodok 50/50, Krasnoyarsk, Russian Federation
Institute of Physics SB RAS, Akademgorodok 50/38, Krasnoyarsk, Russian Federation
Siberian Federal University, Svobodny Prospect 79, Krasnoyarsk, Russian Federation

Доп.точки доступа:
Alieva, R. R.; Tomilin, F. N.; Томилин, Феликс Николаевич; Kuzubov, A. A.; Кузубов, Александр Александрович; Ovchinnikov, S. G.; Овчинников, Сергей Геннадьевич; Kudryasheva, N. S.
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Biogenic ferrihydrite nanoparticles: Synthesis, properties in vitro and in vivo testing and the concentration effect / S. V. Stolyar, O. A. Kolenchukova, A. V. Boldyreva [et al.] // Biomedicines. - 2021. - Vol. 9, Is. 3. - Ст. 323, DOI 10.3390/biomedicines9030323. - Cited References: 52. - This research was funded by the Russian Foundation for Basic Research, the Government of the Krasnoyarsk Territory and the Regional Science Foundation, grant number 20-416-242907 . - ISSN 2227-9059

РУБ Biochemistry & Molecular Biology + Medicine, Research & Experimental + Pharmacology & Pharmacy

Кл.слова (ненормированные):
ferrihydrite nanoparticles -- concentration effect -- microorganisms Klebsiella oxytoca -- neutrophilic granulocytes -- chemiluminescence -- toxicology
Аннотация: Biogenic ferrihydrite nanoparticles were synthesized as a result of the cultivation of Klebsiella oxytoca microorganisms. The distribution of nanoparticles in the body of laboratory animals and the physical properties of the nanoparticles were studied. The synthesized ferrihydrite nanoparticles are superparamagnetic at room temperature, and the characteristic blocking temperature is 23-25 K. The uncompensated moment of ferrihydrite particles was determined to be approximately 200 Bohr magnetons. In vitro testing of different concentrations of ferrihydrite nanoparticles for the functional activity of neutrophilic granulocytes by the chemiluminescence method showed an increase in the release of primary oxygen radicals by blood phagocytes when exposed to a minimum concentration and a decrease in secondary radicals when exposed to a maximum concentration. In vivo testing of ferrihydrite nanoparticles on Wister rats showed that a suspension of ferrihydrite nanoparticles has chronic toxicity, since it causes morphological changes in organs, mainly in the spleen, which are characterized by the accumulation of hemosiderin nanoparticles (stained blue according to Perls). Ferrihydrite can also directly or indirectly stimulate the proliferation and intracellular regeneration of hepatocytes. The partial detection of Perls-positive cells in the liver and kidneys can be explained by the rapid elimination from organs and the high dispersion of the nanomaterial. Thus, it is necessary to carry out studies of these processes at the systemic level, since the introduction of nanoparticles into the body is characterized by adaptive-proliferative processes, accompanied by the development of cell dystrophy and tension of the phagocytic system.

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Держатели документа:
RAS, Kirensky Inst Phys, Fed Res Ctr KSC SB, Krasnoyarsk 660036, Russia.
RAS, Krasnoyarsk Sci Ctr, Fed Res Ctr KSC SB, Krasnoyarsk 660036, Russia.
Siberian Fed Univ, Dept Biophys, Krasnoyarsk 660041, Russia.
RAS, Sci Res Inst Med Problems North, Fed Res Ctr KSC SB, Krasnoyarsk 660022, Russia.
RAS, Inst Biophys, Fed Res Ctr KSC SB, Krasnoyarsk 660036, Russia.

Доп.точки доступа:
Stolyar, S. V.; Столяр, Сергей Викторович; Kolenchukova, Oksana A.; Boldyreva, Anna V.; Kudryasheva, Nadezda S.; Gerasimova, Yu. V.; Герасимова, Юлия Валентиновна; Krasikov, A. A.; Красиков, Александр Александрович; Yaroslavtsev, R. N.; Ярославцев, Роман Николаевич; Bayukov, O. A.; Баюков, Олег Артемьевич; Ladygina, Valentina P.; Birukova, Elena A.; Russian Foundation for Basic ResearchRussian Foundation for Basic Research (RFBR); Government of the Krasnoyarsk Territory; Regional Science Foundation [20-416-242907]
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