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Каталог книг и брошюр библиотеки ИФ СО РАН

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Труды сотрудников ИФ СО РАН

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    On mechanism of antioxidant effect of fullerenols / A. S. Sachkova [et al.] // Biochem. Biophys. Rep. - 2017. - Vol. 9. - P. 1-8, DOI 10.1016/j.bbrep.2016.10.011. - Cited References: 69. - The work was supported by the Russian Foundation for Basic Research, Grants No 15-03-06786 and 15–43-04377-sibir; the state budget allocated to the fundamental research at the Russian Academy of Sciences (project No 01201351504). Adaptation of the bioluminescent enzymatic technique to assess the antioxidant activity of bioactive compounds (humates and fullerenols) was partially supported by the Russian Science Foundation, Grant N 16-06-14-10115. . - ISSN 2405-5808
   Перевод заглавия: О механизме антиоксидантного эффекта фуллеренолов
Кл.слова (ненормированные):
Antioxidant activity -- Bacterial enzymes -- Fullerenol -- Hormesis -- Luminous marine bacteria -- Ultralow concentrations
Аннотация: Fullerenols are nanosized water-soluble polyhydroxylated derivatives of fullerenes, specific allotropic form of carbon, bioactive compounds and perspective pharmaceutical agents. Antioxidant activity of fullerenols was studied in model solutions of organic and inorganic toxicants of oxidative type – 1,4-benzoquinone and potassium ferricyanide. Two fullerenol preparations were tested: С60О2–4(ОН)20–24 and mixture of two types of fullerenols С60О2–4(ОН)20–24+С70О2–4(ОН)20–24. Bacteria-based and enzyme-based bioluminescent assays were used to evaluate a decrease in cellular and biochemical toxicities, respectively. Additionally, the enzyme-based assay was used for the direct monitoring of efficiency of the oxidative enzymatic processes. The bacteria-based and enzyme-based assays showed similar peculiarities of the detoxification processes: (1) ultralow concentrations of fullerenols were active (ca 10–17–10−4 and 10–17–10−5 g/L, respectively), (2) no monotonic dependence of detoxification efficiency on fullerenol concentrations was observed, and (3) detoxification of organic oxidizer solutions was more effective than that of the inorganic oxidizer. The antioxidant effect of highly diluted fullerenol solutions on bacterial cells was attributed to hormesis phenomenon; the detoxification was concerned with stimulation of adaptive cellular response under low-dose exposures. Sequence analysis of 16S ribosomal RNA was carried out; it did not reveal mutations in bacterial DNA. The suggestion was made that hydrophobic membrane-dependent processes are involved to the detoxifying mechanism. Catalytic activity of fullerenol (10−8 g/L) in NADH-dependent enzymatic reactions was demonstrated and supposed to contribute to adaptive bacterial response.

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Держатели документа:
National Research Tomsk Polytechnic University, Tomsk, Russian Federation
Institute of Biophysics SB RAS, Krasnoyarsk, Russian Federation
Siberian Federal University, Krasnoyarsk, Russian Federation
Institute of Physics SB RAS, Krasnoyarsk, Russian Federation
SB RAS Genomics Core Facility, Institute of Chemical Biology and Fundamental Medicine SB RAS, Novosibirsk, Russian Federation

Доп.точки доступа:
Sachkova, A. S.; Kovel, E. S.; Churilov, G. N.; Чурилов, Григорий Николаевич; Guseynov, O. A.; Bondar, A. A.; Dubinina, I. A.; Дубинина, Ирина Александровна; Kudryasheva, N. S.
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Kudryasheva, N. S.
Monitoring of Low-Intensity Exposures via Luminescent Bioassays of Different Complexity: Cells, Enzyme Reactions, and Fluorescent Proteins / N. S. Kudryasheva, E. S. Kovel // Int. J. Mol. Sci. - 2019. - Vol. 20, Is. 18. - Ст. 4451, DOI 10.3390/ijms20184451. - Cited References: 106. - This work was supported by PRAN-32, Program: “Nanostructures: physics, chemistry, biology, technological basis”; RFBR N 18-29-19003; RFBR-Krasnoyarsk Regional Foundation N 18-44-242002, 18-44-240004. . - ISSN 1422-0067
Кл.слова (ненормированные):
luminescence bioassays -- bacterial cells, enzymes -- fluorescent protein -- low-intensity factors -- hormesis -- radiation -- bioactive compounds -- antioxidant activity
Аннотация: The current paper reviews the applications of luminescence bioassays for monitoring the results of low-intensity exposures which produce a stimulative effect. The impacts of radioactivity of different types (alpha, beta, and gamma) and bioactive compounds (humic substances and fullerenols) are under consideration. Bioassays based on luminous marine bacteria, their enzymes, and fluorescent coelenteramide-containing proteins were used to compare the results of the low-intensity exposures at the cellular, biochemical, and physicochemical levels, respectively. High rates of luminescence response can provide (1) a proper number of experimental results under comparable conditions and, therefore, proper statistical processing, with this being highly important for "noisy" low-intensity exposures; and (2) non-genetic, i.e., biochemical and physicochemical mechanisms of cellular response for short-term exposures. The results of cellular exposures were discussed in terms of the hormesis concept, which implies low-dose stimulation and high-dose inhibition of physiological functions. Dependencies of the luminescence response on the exposure time or intensity (radionuclide concentration/gamma radiation dose rate, concentration of the bioactive compounds) were analyzed and compared for bioassays of different organization levels.

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Держатели документа:
Institute of Biophysics, Federal Research Center "Krasnoyarsk Science Center, Russian Academy of Sciences, Krasnoyarsk, 660036, Russian Federation
Siberian Federal University, Krasnoyarsk, 660041, Russian Federation
Institute of Physics, Federal Research Center "Krasnoyarsk Science Center, Russian Academy of Sciences, Krasnoyarsk, 660036, Russian Federation

Доп.точки доступа:
Kovel, E. S.; Ковель, Екатерина Сергеевна
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    Биотехнологический потенциал сибирских штаммов базидиальных грибов - продуцентов ферментов лигноцеллюлазного действия / Ю. А. Литовка, И. Н. Павлов, П. В. Маколова [и др.] // Хим. растит. сырья. - 2020. - № 4. - С. 371-383, DOI 10.14258/JCPRM.2020048396. - Библиогр.: 29 . - ISSN 1029-5151. - ISSN 1029-5143
   Перевод заглавия: Biotechnological potential of the Siberian strains of basidiomycetes - producers of lignolytic and cellulolytic enzymes
Кл.слова (ненормированные):
биодеструкция -- ксилотрофы -- базидиальные грибы -- растительные субстраты -- гидродинамическая активация -- твердофазное и глубинное культивирование -- целлюлазы -- лигниназы -- biodegradation -- xylotrophs -- basidiomycetes -- plant substrates -- hydrodynamic activation -- solid-phase and deep cultivation -- cellulases -- ligninases
Аннотация: Представлены результаты исследования дереворазрушающих свойств сибирских штаммов ксилотрофных базидиомицетов Armillaria, Ganoderma, Fomitopsis, Heterobasidion и Porodaedalea. Определены их ростовые параметры и ферментативная активность при твердофазном и глубинном культивировании. Быстрорастущими культурами на целлюлозо-, танинсодержащих средах, хвойных и лиственных субстратах (исходных и гидродинамически активированных) являются Fomitopsis pinicola и Ganoderma lucidum. Базидиальные грибы проявляют различную ростовую реакцию на предварительную гидродинамическую активацию березовых опилок (ускорение роста / замедление / индифферентность). Максимальная дереворазрушающая активность на древесине Abies sibirica отмечена для грибов Armillaria borealis, Ganoderma tsugae, G. lucidum, F. pinicola и Porodaedalea niemelaei: убыль массы субстрата составила 8–11%; сумма полисахаридов уменьшилась в 1.4 раза преимущественно за счет ферментолиза трудногидролизуемых полисахаридов. Высокие показатели ферментативной активности грибов отмечены при твердофазном и глубинном культивировании с индуктором. Максимальная активность фенолоксидазы характерна для G. tsugae (1.2 ед/г·с); карбоксиметилцеллюлазы – для штаммов F.pinicola и G. lucidum (11.8 и 10.3 ед/мл); ксиланазы – для H. abietinum (3.8 ед/мл). По совокупности показателей экспресс-тестов, количественного определения ферментативной активности, ростовых параметров на лигноцеллюлозных субстратах и степени биоконверсии древесины наиболее перспективным продуцентом лигнолитических ферментов в условиях in vitro является штамм Gl4-16A G. lucidum; целлюлолитических ферментов – штамм Fp6-17 F. pinicola.
The results of a study of the wood-destroying properties of Siberian strains of xylotrophic basidiomycetes (Armillaria, Ganoderma, Fomitopsis, Heterobasidion and Porodaedalea) are presented. The growth parameters and enzymatic activity of the strains were determined during solid-phase and deep cultivation. Fomitopsis pinicola and Ganoderma lucidum are fast-growing fungi on cellulose-, tannin-containing nutrient media, coniferous and deciduous plant substrates (source and hydrodynamically activated). The growth coefficient on media with tannin and Na-carboxymethyl cellulose is more than 45; on plant substrates - more than 30. The strains exhibit a different growth reaction to the preliminary activation of birch sawdust (growth acceleration / growth slowdown / indifference). The maximum wood-destroying activity on wood of A. sibirica noted for the fungi A. borealis, G. tsugae, G. lucidum, F. pinicola, and P. niemelaei. The decrease in substrate mass was 8-11%; the amount of polysaccharides decreased on average 1.4 times mainly due to the fermentolysis of hard-hydrolyzable polysaccharides. High enzymatic activity of fungi observed during solid-phase and deep cultivation with an inducer. The maximum activity of phenol oxidase is characteristic of G. tsugae (1.21 units/g·s); carboxymethyl cellulase - for F.pinicola and G. lucidum strains (11.8 and 10.3 units/ml, respectively); xylanases - for H. abietinum (3.8 u/ml). The maximum accumulation of extracellular protein observed in F. pinicola (0.89 mg/ml). According to the totality of rapid test indicators, quantitative determination of enzymatic activity, growth parameters on lignocellulosic substrates and the degree of wood bioconversion, the most promising producer of lignolytic enzymes in vitro is the Gl4-16A Ganoderma lucidum strain; cellulolytic enzymes - strain Fp6-17 Fomitopsis pinicola.

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Держатели документа:
Institute of Forest Named After V.N. Sukachev, SB, RAS, FRC, KSC, SB, RAS, Akademgorodok, 50/28, Krasnoyarsk, 660036, Russian Federation
Siberian State University of Science and Technology Named After Academician M.F. Reshetneva, pr. Mira, 82, Krasnoyarsk, 660049, Russian Federation
Krasnoyarsk Scientific Center, SB, RAS, Akademgorodok, 50, Krasnoyarsk, 660036, Russian Federation
Institute of Physics L.V. Kirensky, SB, RAS, Akademgorodok, 50/43, Krasnoyarsk, 660036, Russian Federation

Доп.точки доступа:
Литовка, Ю. А.; Павлов, И. Н.; Маколова, П. В.; Тимофеев, А. А.; Литвинова, Е. А.; Васильева, А. А.; Шабанов, Александр Васильевич; Shabanov, A. V.
}
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Functionalized magnetite nanoparticles: Characterization, bioeffects, and role of reactive oxygen species in unicellular and enzymatic systems / A. G. Kicheeva, E. S. Sushko, L. S. Bondarenko [et al.] // Int. J. Mol. Sci. - 2023. - Vol. 24, Is. 2. - Ст. 1133, DOI 10.3390/ijms24021133. - Cited References: 125. - This research was funded by Russian Science Foundation, N 22-73-10222 . - ISSN 1661-6596. - ISSN 1422-0067
Кл.слова (ненормированные):
magnetite nanoparticles -- surface modification -- humic acids -- organosilane -- reactive oxygen species -- toxicity -- bioluminescence assay -- bacteria -- enzymes -- oxidative stress -- prooxidant -- ferroptosis
Аннотация: The current study evaluates the role of reactive oxygen species (ROS) in bioeffects of magnetite nanoparticles (MNPs), such as bare (Fe3O4), humic acids (Fe3O4-HA), and 3-aminopropyltriethoxysilane (Fe3O4-APTES) modified MNPs. Mössbauer spectroscopy was used to identify the local surrounding for Fe atom/ions and the depth of modification for MNPs. It was found that the Fe3O4-HA MNPs contain the smallest, whereas the Fe3O4-APTES MNPs contain the largest amount of Fe2+ ions. Bioluminescent cellular and enzymatic assays were applied to monitor the toxicity and anti-(pro-)oxidant activity of MNPs. The contents of ROS were determined by a chemiluminescence luminol assay evaluating the correlations with toxicity/anti-(pro-)oxidant coefficients. Toxic effects of modified MNPs were found at higher concentrations (>10−2 g/L); they were related to ROS storage in bacterial suspensions. MNPs stimulated ROS production by the bacteria in a wide concentration range (10−15–1 g/L). Under the conditions of model oxidative stress and higher concentrations of MNPs (>10−4 g/L), the bacterial bioassay revealed prooxidant activity of all three MNP types, with corresponding decay of ROS content. Bioluminescence enzymatic assay did not show any sensitivity to MNPs, with negligible change in ROS content. The results clearly indicate that cell-membrane processes are responsible for the bioeffects and bacterial ROS generation, confirming the ferroptosis phenomenon based on iron-initiated cell-membrane lipid peroxidation.

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Держатели документа:
Institute of Biophysics of Siberian Branch of Russian Academy of Sciences, Federal Research Center “Krasnoyarsk Science Center” of Siberian Branch of Russian Academy of Sciences, Krasnoyarsk, 660036, Russian Federation
Institute of Physics of Siberian Branch of Russian Academy of Sciences, Federal Research Center “Krasnoyarsk Science Center” of Siberian Branch of Russian Academy of Sciences, Krasnoyarsk, 660036, Russian Federation
Department of General Engineering, Moscow Aviation Institute, Moscow, 125993, Russian Federation
Department of Chemistry, Lomonosov Moscow State University, Moscow, 119991, Russian Federation
Sklifosovsky Research Institute for Emergency Medicine, Moscow, 129010, Russian Federation
Federal Research Center of Problems of Chemical Physics and Medicinal Chemistry, Russian Academy of Sciences, Chernogolovka, 142432, Russian Federation
Institute for Polymers, Composites and Biomaterials, National Research Council of Italy, P.le Fermi, 1, Portici, 80055, Italy
Biophysics Department, Siberian Federal University, Krasnoyarsk, 660041, Russian Federation

Доп.точки доступа:
Kicheeva, A. G.; Sushko, E. S.; Сушко, Екатерина Сергеевна; Bondarenko, L. S.; Kydralieva, K. A.; Pankratov, D. A.; Tropskaya, N. S.; Dzeranov, A. A.; Dzhardimalieva, G. I.; Zarrelli, M.; Kudryasheva, N. S.
}
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