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    Biodegradable microcarriers for herbicide delivery / S. Thomas, R. V, H. J. Maria [и др.] // Биотехнология новых материалов - окружающая среда - качество жизни : материалы IV Международной научной конференция : Красноярск, 10–13 октября 2021 г. - Красноярск, 2021. - С. 156-159
   Перевод заглавия: Биоразлагаемые микроносители для доставки гербицидов

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Доп.точки доступа:
Thomas, S.; V, R.; Maria, H. J.; Kiselev, E. G.; Киселев, Евгений Геннадьевич; Nemtsev, I. V.; Немцев, Иван Васильевич; "Biotechnology of new materials - environment - quality of life", International scientific conference(4 ; 2021 ; Oct. ; Krasnoyarsk (on-line)); "Биотехнология новых материалов - окружающая среда - качество жизни", международная научная конференция(4 ; 2021 ; окт. ; Красноярск (on-line)); Сибирский федеральный университет
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Biosynthesis and properties of P(3HB-co-3HV-co-3H4MV) produced by using the wild-type strain Cupriavidus eutrophus B-10646 / T. Volova [et al.] // J. Chem. Technol. Biotechnol. - 2019. - Vol. 94, Is. 1. - P. 195-203, DOI 10.1002/jctb.5763. - Cited References: 32. - This study was supported financially by Project ‘Agropreparations of the new generation: a strategy of construction and realization’ (Agreement No 074‐02‐2018‐328) in accordance with Resolution No 220 of the Government of the Russian Federation of April 9, 2010, ‘On measures designed to attract leading scientists to the Russian institutions of higher learning’. . - ISSN 0268-2575
Кл.слова (ненормированные):
polyhydroxyalkanoates -- 3-hydroxy-4-methylvalerate -- synthesis -- physicochemical properties
Аннотация: BACKGROUND: Polyhydroxyalkanoates (PHA) containing 3-hydroxy-4-methylvalerate (3H4MV) have better processing properties than other PHA types and were not prone to ageing. The main challenge in the production of these polymers is to simultaneously achieve high cell biomass, high polymer content, and high molar fraction of 3H4MV. The aim of this study was to investigate the production of poly(3-hydroxybutyrate-co-3-hydroxyvalerate-co-3-hydroxy-4-methylvalerate) [P(3HB-co-3 HV-co-3H4MV)] by Cupriavidus eutrophus B-10646, synthesize polymers with different contents of 3H4MV and investigate their properties. RESULTS: It was shown that 4-methylvalerate (4MV, the precursor substrate) concentration in the culture medium must not be higher than 1 g L−1, and that 4MV must be carefully dosed, with at least 10–12 h intervals between supplementations. A series of polymers with molar fractions of 3H4MV between 2.7 and 11.3 mol% was synthesized. Degrees of crystallinity, molecular weight characteristics, and thermal properties of the polymers have been investigated as dependent on proportions of monomers. CONCLUSION: The content of 3H4MV depends on the concentration of 4MV and conditions of carbon nutrition. The molar fraction of 3H4MV had a strong effect on the crystalline to amorphous region ratio. PHA containing 3H4MV specimens synthesized in this study had a degree of crystallinity of below 50%, which remained unchanged for 2.5 years.

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Держатели документа:
Siberian Federal University, Krasnoyarsk, Russian Federation
Institute of Biophysics SB RAS, Federal Research Center “Krasnoyarsk Science Center SB RAS”, Krasnoyarsk, Russian Federation
L.V. Kirenskii Institute of Physics SB RAS, Federal Research Center “Krasnoyarsk Science Center SB RAS”, Krasnoyarsk, Russian Federation
Institute of Chemistry and Chemical Technology SB RAS, Federal Research Center “Krasnoyarsk Science Center SB RAS”, Krasnoyarsk, Russian Federation
International and Inter University Centre of Nanoscience and Nanotechnology, Mahatam Gandhi University, Kottyam, India

Доп.точки доступа:
Volova, T.; Menshikova, O.; Zhila, N.; Vasiliev, A. D.; Васильев, Александр Дмитриевич; Kiselev, E.; Peterson, I.; Shishatskaya, E.; Thomas, S.
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Laser processing of polymer films fabricated from phas differing in their monomer composition / T. G. Volova, A. I. Golubev, I. V. Nemtsev [и др.] // Биотехнология новых материалов - окружающая среда - качество жизни : материалы IV Международной научной конференция : Красноярск, 10–13 октября 2021 г. - Красноярск, 2021. - С. 51-54

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Доп.точки доступа:
Volova, T. G.; Волова, Татьяна Григорьевна; Golubev, A. I.; Голубев Алексей И.; Nemtsev, I. V.; Немцев, Иван Васильевич; Lukyanenko, A. V.; Лукьяненко, Анна Витальевна; Dudaev, A. E.; Shishatskaya, E. I.; Шишацкая, Екатерина Игоревна; "Biotechnology of new materials - environment - quality of life", International scientific conference(4 ; 2021 ; Oct. ; Krasnoyarsk (on-line)); "Биотехнология новых материалов - окружающая среда - качество жизни", международная научная конференция(4 ; 2021 ; окт. ; Красноярск (on-line))
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Magnetic nanoparticles and DNA-aptamers conjugates for cancer therapy / A. Е. Sokolov [et al.] // Int. Baltic Conf. Magnet. (IBCM-2017) : Focus on funcshionalized magnetic struct. for energy and biotech. : book of abstracts. - 2017. - P. 77. - Библиогр.: 4

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Доп.точки доступа:
Sokolov, A. Е.; Соколов, Алексей Эдуардович; Ivanova, O. S.; Иванова, Оксана Станиславовна; Zabluda, V. N.; Заблуда, Владимир Николаевич; Dubinina, A. V.; Semina, P. N.; Семина, Полина Николаевна; Zamay, G. S.; Замай Г. С.; Zamay, T. N.; Zamay, S. S.; Замай С. С.; Volochaev, M. N.; Волочаев, Михаил Николаевич; Svetlichnyi, V.; Светличный В.; Lapin, I. N.; Лапин Иван; Shabalina, A.; Шабалина Анастасия; Solodova, O. V.; Солодова О. В.; International Baltic Conference on Magnetism: Focus on funcshionalized magnetic structures for energy and biotechnology (2 ; 2017 ; 20-24 Aug. ; Svetlogorsk); Балтийский федеральный университет им. И. Канта
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    Morphological aspects of monocyte/macrophage polarization on biopolymer scaffolds in atherosclerosis patients / Menzyanova [et al.] // J. Biotechnol. Biomater. - 2018. - Vol. 8, Is. 3. - Ст. 1000284, DOI 10.4172/2155-952X.1000284. - Cited References: 67. - The study was supported by the State budget allocated to the fundamental research at the Russian Academy of Sciences (project No 01201351505). . - ISSN 2155-952X
   Перевод заглавия: Морфологические аспекты поляризации моноцитов / макрофагов на биополимерных каркасах у пациентов с атеросклерозом
Кл.слова (ненормированные):
Monocytes -- Macrophages -- Cell morphology -- Polyhydroxyalkanoates -- PHA -- Copolymers -- Atherosclerosis -- Intravascular stenting
Аннотация: The morphotypes of human macrophages (MPh) were studied in the culture on nano-structured substrates, made from polyhydroxyalcanoates (PHAs) of various monomer compositions, prepared by casting polymer solutions on a defatted glass and followed by the solvent evaporation. Its surface relief, being further in direct contact with human cells in vitro was analyzed by AFM and SEM scanning. It was shown, that the features of micro/nano relief depend on the monomeric composition of polymer substrates. Monocytes (MNs) of patients with atherosclerosis and cardiac ischemia undergoing stenting and conventional anti-atherosclerotic therapy were harvested prior to and after stenting. After isolation MNs were cultured and transformed into MPh in direct contact with biopolymer culture substrates with different monomer composition and Nano-reliefs in comparison with culture plastic. Sub-populations of cells with characteristic morphology in each phenotypic class were described and their ratios for five samples of polymers were counted as an intermediate result in the development of “smart” material for blood vessel recovery. The results obtained allow us to assume that the processes of MPh differentiation and polarization in vitro depend not only on the features of the micro/nano relief of biopolymer substrates but also on the initial state of MNs in vivo and the general response of patients.

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Держатели документа:
Siberian Federal University, Svobodny, Krasnoyarsk, Russia
L.V. Kirensky Institute of Physics, Siberian Branch of the Russian Academy of Sciences, Krasnoyarsk, Russia
Federal Research Centre Krasnoyarsk Scientific Centre of the Siberian Branch of the Russian Academy of Sciences, Krasnoyarsk, Russia
Federal Centres for Cardiovascular Surgery, Krasnoyarsk, Russia

Доп.точки доступа:
Menzyanova, Natalia G.; Pyatina, Svetlana V.; Nikolaeva, Elena D.; Shabanov, A. V.; Шабанов, Александр Васильевич; Nemtsev, I. V.; Stolyarov, D. P.; Dryganov, Dmitry B.; Sakhnov, Eugene V.; Vinokurova, Daria A.; Shishatskaya, Ekaterina I.
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Properties of films from degradable phas of different monomer compositions / T. G. Volova, E. G. Kiselev, A. E. Dudaev [и др.] // Биотехнология новых материалов - окружающая среда - качество жизни : материалы IV Международной научной конференция : Красноярск, 10–13 октября 2021 г. - Красноярск, 2021. - С. 40-44

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Доп.точки доступа:
Volova, T. G.; Волова, Татьяна Григорьевна; Kiselev, E. G.; Киселев, Евгений Геннадьевич; Dudaev, A. E.; Nemtsev, I. V.; Немцев, Иван Васильевич; Lukyanenko, A. V.; Лукьяненко, Анна Витальевна; Sukovatyǐ, A. G.; Суковатый, Алексей Григорьевич; Ryltseva, G.; Shishatskaya, E. I.; Шишацкая, Екатерина Игоревна; "Biotechnology of new materials - environment - quality of life", International scientific conference(4 ; 2021 ; Oct. ; Krasnoyarsk (on-line)); "Биотехнология новых материалов - окружающая среда - качество жизни", международная научная конференция(4 ; 2021 ; окт. ; Красноярск (on-line)); Сибирский федеральный университет
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Structure- and interaction-based design of anti-SARS-CoV-2 Aptamers / V. Mironov, I. A. Shchugoreva, P. V. Artyushenko [et al.] // Chem. - Eur. J. - 2022. - Vol. 28, Is. 12. - Ст. e202104481, DOI 10.1002/chem.202104481. - Cited References: 85. - The authors are grateful to JCSS Joint Super Computer Center of the Russian Academy of Sciences – Branch of Federal State Institution “Scientific Research Institute for System Analysis of the Russian Academy of Sciences” for providing supercomputers for computer simulations. The authors thank the RSC Group (www.rscgroup.ru) and personally Mr. Oleg Gorbachev for the constant support and establishment of “The Good Hope Net Project” (www.thegoodhope.net) multifunctional non-profit anti-CoVID research project. The authors also thank the Helicon Company (www.helicon.ru) and personally Olesya Kucenko, Alexander Kolobov, Leonid Klimov for instrumental support and help with conducting fluorescence polarization assays, which were performed on a demo instrument Clariostar Plus microplate reader (BMG LABTECH, Germany). We thank Dr. Yong-Zhen Zhang for providing the genome sequence of 2019-nCoV and Dr. Xinquan Wang for providing the crystal structure of the binding domain of the SARS-2 Spike protein. The authors are grateful to Aptamerlab LCC financial support (www.aptamerlab.com). Y.A.’s work at Argonne National Laboratory was supported by the U.S. Department of Energy, Office of Science, under contract DE-AC02-06CH11357. The work of D.M. and G.G. has been done as part of the BioExcel CoE (www.bioexcel.eu), a project funded by the European Union contracts H2020-INFRAEDI-02-2018-823830 and H2020-EINFRA-2015-1-675728. D.M. and G.G. also thank the CSC-IT center in Espoo, Finland, as well as PRACE for awarding access to resource Curie-Rome based in France at GENCI. V.M. thanks Russian Foundation for Basic Research (project number 19-03-00043). A.B.’s and N.K.’s work was supported by the Ministry of Science and Higher Education of Russian Federation (state assignment of the Research Center of Biotechnology RAS). V. deF. G.C., N.B and G.O. are grateful to FISR2020 _00177 Shield, Italian Ministry of Education and Research, for funding. GC is grateful to the European Union's Horizon 2020 research and innovation program under the Marie Skłodowska-Curie grant agreement: cONCReTE 872391; PRISAR2 872860. Use of the 13 A BioSAXS beamtime at the Taiwan Photon Source is acknowledged. The work of M.V.B was funded by the Canadian Institutes of Health Research grant OV1-170353. SAXS measurements and PIEDA analyses were funded by the Russian Science Foundation (project No 21-73-20240 for A.S.K.) . - ISSN 0947-6539. - ISSN 1521-3765

РУБ Chemistry, Multidisciplinary
Рубрики:
BIOLOGICAL MACROMOLECULES
   SOLUTION SCATTERING
   BINDING
   SPIKE
Кл.слова (ненормированные):
aptamers -- fragment molecular orbitals method -- molecular dynamics -- SARS-CoV-2 -- SAXS
Аннотация: Aptamer selection against novel infections is a complicated and time-consuming approach. Synergy can be achieved by using computational methods together with experimental procedures. This study aims to develop a reliable methodology for a rational aptamer in silico et vitro design. The new approach combines multiple steps: (1) Molecular design, based on screening in a DNA aptamer library and directed mutagenesis to fit the protein tertiary structure; (2) 3D molecular modeling of the target; (3) Molecular docking of an aptamer with the protein; (4) Molecular dynamics (MD) simulations of the complexes; (5) Quantum-mechanical (QM) evaluation of the interactions between aptamer and target with further analysis; (6) Experimental verification at each cycle for structure and binding affinity by using small-angle X-ray scattering, cytometry, and fluorescence polarization. By using a new iterative design procedure, structure- and interaction-based drug design (SIBDD), a highly specific aptamer to the receptor-binding domain of the SARS-CoV-2 spike protein, was developed and validated. The SIBDD approach enhances speed of the high-affinity aptamers development from scratch, using a target protein structure. The method could be used to improve existing aptamers for stronger binding. This approach brings to an advanced level the development of novel affinity probes, functional nucleic acids. It offers a blueprint for the straightforward design of targeting molecules for new pathogen agents and emerging variants.

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Держатели документа:
Lomonosov Moscow State Univ, Dept Chem, Moscow 119991, Russia.
Kyungpook Natl Univ, Dept Chem, Daegu 702701, South Korea.
Fed Res Ctr KSC SB RAS, Lab Digital Controlled Drugs & Theranost, Krasnoyarsk 660036, Russia.
Natl Tsing Hua Univ, Dept Chem Engn, Hsinchu 30013, Taiwan.
Siberian Fed Univ, Sch Nonferrous Met & Mat Sci, Krasnoyarsk 660041, Russia.
IRCCS Neuromed Ist Neurol Mediterraneo Pozzilli, Via Atinense 18, I-86077 Pozzilli, Italy.
Krasnoyarsk State Med Univ, Lab Biomol & Med Technol, Krasnoyarsk 660022, Russia.
Univ Jyvaskyla, Nanosci Ctr, Jyvaskyla 40014, Finland.
Univ Jyvaskyla, Dept Chem, Jyvaskyla 40014, Finland.
Univ Naples Federico II, Dept Pharm, I-80138 Naples, Italy.
Univ Naples Federico II, Dept Mol Med & Med Biotechnol, I-80131 Naples, Italy.
Kirensky Inst Phys, Lab Phys Magnet Phenomena, Krasnoyarsk 660012, Russia.
Siberian Fed Univ, Sch Fundamental Biol & Biotechnol, Krasnoyarsk 660041, Russia.
Xiamen Univ, Coll Chem & Chem Engn, Dept Chem Biol, Xiamen 361005, Peoples R China.
State Res Ctr Virol & Biotechnol Vector, Koltsov 630559, Russia.
NRC Kurchatov Inst, Moscow 117259, Russia.
Russian Acad Sci, Siberian Branch, Inst Chem Biol & Fundamental Med, Novosibirsk 630090, Russia.
Russian Acad Sci, Res Ctr Biotechnol, AN Bach Inst Biochem, Lab Immunobiochem, Moscow 119071, Russia.
Tomsk State Univ, Lab Adv Mat & Technol, Tomsk 634050, Russia.
Altai State Univ, Barnaul 656049, Russia.
Fed Res Ctr KSC SB RAS, Dept Mol Elect, Krasnoyarsk 660036, Russia.
Krasnoyarsk State Med Univ, Dept Infect Dis & Epidemiol, Krasnoyarsk 660022, Russia.
Natl Pingtung Univ, Dept Appl Chem, Pingtung 900391, Taiwan.
Natl Synchrotron Radiat Res Ctr, Hsinchu Sci Pk, Hsinchu 30076, Taiwan.
Res Natl Council CNR, Inst Genet & Biomed Res IRGB, I-09042 Milan, Italy.
Shanghai Jiao Tong Univ, Sch Med, Renji Hosp, Inst Mol Med, Shanghai 200127, Peoples R China.
Natl Inst Adv Ind Sci & Technol, Res Ctr Computat Design Adv Funct Mat, Tsukuba, Ibaraki 3058560, Japan.
Hunan Univ, Coll Chem & Chem Engn, Changsha 410082, Hunan, Peoples R China.
Argonne Natl Lab, Computat Sci Div, Lemont, IL 60439 USA.
Dept Chem & Biomol Sci, Ottawa, ON K1N 6N5, Canada.

Доп.точки доступа:
Mironov, Vladimir; Shchugoreva, I. A.; Artyushenko, P. V.; Артюшенко, Полина Владимировна; Morozov, D. I.; Морозов, Дмитрий И.; Borbone, N.; Oliviero, G.; Zamay, T. N.; Замай, Т. Н.; Moryachkov, R. V.; Морячков, Роман Владимирович; Kolovskaya, .; Коловская О. С.; Lukyanenko, K. A.; Лукьяненко Кирилл А.; Song, Y. L.; Merkuleva, I. A.; Zabluda, V. N.; Заблуда, Владимир Николаевич; Peters, G.; Koroleva, L. S.; Veprintsev, D. V.; Glazyrin, Y. E.; Volosnikova, E. A.; Belenkaya, S. V.; Esina, T. I.; Isaeva, A. A.; Nesmeyanova, .; Shanshin, D. V.; Berlina, A. N.; Komova, N. S.; Svetlichnyi, V. A.; Silnikov, V. N.; Shcherbakov, D. N.; Zamay, G. S.; Замай, Галина Сергеевна; Zamay, S. S.; Замай, С. С.; Smolyarova, T. E.; Смолярова, Татьяна Евгеньевна; Tikhonova, E. P.; Chen, U. S.; Jeng, G.; Condorelli, V.; Franciscis, G.; Groenhof, C. Y.; Yang, A. A.; Moskovsky, D. G.; Fedorov, F. N.; Tomilin, F. N.; Томилин, Феликс Николаевич; Tan, Y.; Alexeev, M. V.; Berezovski, A. S.; Kichkailo, A.S.; Aptamerlab LCC; U.S. Department of Energy, Office of ScienceUnited States Department of Energy (DOE) [DE-AC02-06CH11357]; European UnionEuropean Commission [H2020-INFRAEDI-02-2018-823830, H2020-EINFRA-2015-1-675728, 872391, PRISAR2 872860]; CSC-IT center in Espoo, Finland; PRACE; Russian Foundation for Basic ResearchRussian Foundation for Basic Research (RFBR) [19-03-00043]; Ministry of Science and Higher Education of Russian Federation (state assignment of the Research Center of Biotechnology RAS); Italian Ministry of Education and ResearchMinistry of Education, Universities and Research (MIUR) [FISR2020 _00177]; Canadian Institutes of Health ResearchCanadian Institutes of Health Research (CIHR) [OV1-170353]; Russian Science FoundationRussian Science Foundation (RSF) [21-73-20240]
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The use of biogenic nanoparticles of ferrihydrite in the propagation of horticultural crops by cutting / V. L. Bopp, N. A. Mistratova, E. A. Petrakovskaya [et al.] // IOP Conference Series: Earth and Environmental Science. - 2020. - Vol. 421, Is. 6. - Ст. 062014, DOI 10.1088/1755-1315/421/6/062014. - Cited References: 16
Кл.слова (ненормированные):
Biotechnology -- Nanoparticles
Аннотация: The effect of biogenic ferrihydrite nanoparticles on the rhizogenesis of garden plants (Salix ledebouriana, Philadelphus coronarius, Thuja occidentalis, and Cerasus fruticosa) was studied. It was shown that nanoparticles of biogenic ferrihydrite (tested 4 modifications) are biologically active. It is assumed that the mechanism of their influence on the rhizogenesis of the tested plant species is general and is associated with the generation of reactive oxygen species in interaction with endogenous hydrogen peroxide.

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Держатели документа:
Krasnoyarsk State Agrarian University, pr. Mira 90, Krasnoyarsk, 660049, Russian Federation
Kirensky Institute of Physics, Federal Research Center KSC SB RAS, Krasnoyarsk 50, Akademgorodok, 660036, Russian Federation
Federal Research Center Krasnoyarsk Science Center, Siberian Branch of the Russian Academy of Sciences, Krasnoyarsk 50, Akademgorodok, 660036, Russian Federation

Доп.точки доступа:
Bopp, V. L.; Mistratova, N. A.; Petrakovskaya, E. A.; Петраковская, Элеонора Анатольевна; Teremova, M. I.; Gurevich, Yu. L.; International Scientific Conference on Agribusiness, Environmental Engineering and Biotechnologies(2nd ; 2019 ; 13-14 Nov. ; Krasnoyarsk)
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Биополимер П(3ГБ-СО-3ГВ) для 3D-биопечати твердых тканей методом послойного наплавления материала / К. А. Кистерский, А. В. Демиденко, Е. Г. Киселев [и др.] // IV Международная научная конференция "Биотехнология новых материалов - окружающая среда - качество жизни" : материалы конф. - Красноярск, 2021. - С. 58-62

Материалы конференции, ,
Держатели документа:
Институт физики им. Л.В. Киренского СО РАН

Доп.точки доступа:
Кистерский, Константин Александрович; Демиденко, Алексей Владимирович; Киселев, Евгений Геннадьевич; Барановский, Сергей Викторович; Васильев, Александр Дмитриевич; Vasiliev, A. D.; Суковатый, Алексей Григорьевич; Шишацкая, Екатерина Игоревна; "Biotechnology of new materials - environment - quality of life", International scientific conference(4 ; 2021 ; Oct. 10-14 ; Krasnoyarsk (on-line)); "Биотехнология новых материалов - окружающая среда - качество жизни", международная научная конференция (4 ; 2021 ; 10-14 окт. ; Красноярск (on-line)); Сибирский федеральный университет
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10.

Жила, Наталья Олеговна.
Микроструктура и свойства пленок, полученных из ПГА, синтезированных новым штаммом C. necator IBH-21 на различных С-субстратах / Н. О. Жила, К. Сапожникова, I. V. Nemtsev // Биотехнология новых материалов - окружающая среда - качество жизни : материалы IV Международной научной конференции. - Красноярск, 2021. - С. 45-48. - Библиогр.: 5

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Доп.точки доступа:
Сапожникова, К.; Немцев, Иван Васильевич; Nemtsev, I. V.; Zhila, N. O.; "Biotechnology of new materials - environment - quality of life", International scientific conference(4 ; 2021 ; Oct. 10-13 ; Krasnoyarsk (on-line)); "Биотехнология новых материалов - окружающая среда - качество жизни", международная научная конференция(4 ; 2021 ; 10-13 окт. ; Красноярск (on-line)); Сибирский федеральный университет
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